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The map label for this gene is 52842891

Identifier: 52842891

GI number: 52842891

Start: 3033585

End: 3034331

Strand: Reverse

Name: 52842891

Synonym: lpg2685

Alternate gene names: NA

Gene position: 3034331-3033585 (Counterclockwise)

Preceding gene: 52842892

Following gene: 52842885

Centisome position: 89.3

GC content: 42.03

Gene sequence:

>747_bases
TTGGACAGCCTTTTAAAAAGGAGGATTAATATGTTAGTCACGAAGGAAGTGGAATATGAGGATGGTGATACTGTATGCAA
AGGTTTTATTGCCTATCATTCCAGTGCCTCAAAACCATTACCTTGTGTCATGGTTGCTCATGATTGGGGGGGGCGTGGAG
AGGGAGCTTGTAACAAAGCGAGACAGCTTGCTGGCATGGGGTATATTGGATTCGCTATAGACATGTATGGAAATGCCAAG
CTAGGTAAGGATAAGGCAGAGAAAAGAGCTTTAATGACTCCTTTCAGAGAAAATAGAGGGAAGTTAATCACTCGTATAAA
TGCGGCCTTCAACAAAGTGGTGCAGTTGCCTGAAGTGGATAGTGAGAAAGTGGCTGCTATTGGTTATTGTTTCGGTGGTT
TGTGCGTATTGGACTTGATACGTTCCGGGGCACCGCTTAAAGGAGTTGTCAGTTTTCATGGGGTATTATTACCTTTAGAG
GGTGAGAGTAATAAGTCATTAAATGCGAAAGTATTGATATTACATGGTTATGATGATCCCTTAGTACCAATTGAGCAAGT
TAACCAGTTCGCTATTGAAATGACAGAAAGGAAAGTGGACTGGCAGGTCCATGTTTATGGCCAAACAGCTCATTCGTTTA
CTGACCCTGGTGCGAATGATGATGAAATGGGACTGCATTACAATAAATTAGCGGATCAACGTTCCTGGCAAAGCACTCAA
TTGTTTTTGCAAGAGTTATTTGCATGA

Upstream 100 bases:

>100_bases
ATTCAAAAACAATATAATAAGAAGGGCTCGCAGGAGCCCTTCTTATTATATATGGGTAGTTCATTTTATTAAAACTTTGA
CAGGTAGCTATTAATGCTGT

Downstream 100 bases:

>100_bases
TTTATTGATATTAGACTTTTACATCAGCTGGTTATTTTGTTTTGGAGCAAGACGCAAACGTTTTGAGGAGAAGAGGTTAT
CTGCAGAAAATGAGCACCAT

Product: dienelactone hydrolase family protein

Products: NA

Alternate protein names: Dienelactone Hydrolase Family Protein; Carboxymethylenebutenolidase; Dienelactone Hydrolase Family; Hydrolase; Dienelactone Hydrolase Protein; Dienelactone Hydrolase-Related; Dienelactone Hydrolases; Transposase Remnant

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MDSLLKRRINMLVTKEVEYEDGDTVCKGFIAYHSSASKPLPCVMVAHDWGGRGEGACNKARQLAGMGYIGFAIDMYGNAK
LGKDKAEKRALMTPFRENRGKLITRINAAFNKVVQLPEVDSEKVAAIGYCFGGLCVLDLIRSGAPLKGVVSFHGVLLPLE
GESNKSLNAKVLILHGYDDPLVPIEQVNQFAIEMTERKVDWQVHVYGQTAHSFTDPGANDDEMGLHYNKLADQRSWQSTQ
LFLQELFA

Sequences:

>Translated_248_residues
MDSLLKRRINMLVTKEVEYEDGDTVCKGFIAYHSSASKPLPCVMVAHDWGGRGEGACNKARQLAGMGYIGFAIDMYGNAK
LGKDKAEKRALMTPFRENRGKLITRINAAFNKVVQLPEVDSEKVAAIGYCFGGLCVLDLIRSGAPLKGVVSFHGVLLPLE
GESNKSLNAKVLILHGYDDPLVPIEQVNQFAIEMTERKVDWQVHVYGQTAHSFTDPGANDDEMGLHYNKLADQRSWQSTQ
LFLQELFA
>Mature_248_residues
MDSLLKRRINMLVTKEVEYEDGDTVCKGFIAYHSSASKPLPCVMVAHDWGGRGEGACNKARQLAGMGYIGFAIDMYGNAK
LGKDKAEKRALMTPFRENRGKLITRINAAFNKVVQLPEVDSEKVAAIGYCFGGLCVLDLIRSGAPLKGVVSFHGVLLPLE
GESNKSLNAKVLILHGYDDPLVPIEQVNQFAIEMTERKVDWQVHVYGQTAHSFTDPGANDDEMGLHYNKLADQRSWQSTQ
LFLQELFA

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17536419, Length=242, Percent_Identity=37.1900826446281, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17532655, Length=211, Percent_Identity=37.914691943128, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17532653, Length=245, Percent_Identity=34.6938775510204, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17536415, Length=242, Percent_Identity=34.297520661157, Blast_Score=124, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI193204305, Length=212, Percent_Identity=34.9056603773585, Blast_Score=117, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI17534829, Length=155, Percent_Identity=39.3548387096774, Blast_Score=104, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27466; Mature: 27466

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLLKRRINMLVTKEVEYEDGDTVCKGFIAYHSSASKPLPCVMVAHDWGGRGEGACNKA
CCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHH
RQLAGMGYIGFAIDMYGNAKLGKDKAEKRALMTPFRENRGKLITRINAAFNKVVQLPEVD
HHHHCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCHHCCCCEEEHHHHHHHHHHCCCCCC
SEKVAAIGYCFGGLCVLDLIRSGAPLKGVVSFHGVLLPLEGESNKSLNAKVLILHGYDDP
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEECCCCCCCCCEEEEEEECCCCC
LVPIEQVNQFAIEMTERKVDWQVHVYGQTAHSFTDPGANDDEMGLHYNKLADQRSWQSTQ
CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHH
LFLQELFA
HHHHHHCC
>Mature Secondary Structure
MDSLLKRRINMLVTKEVEYEDGDTVCKGFIAYHSSASKPLPCVMVAHDWGGRGEGACNKA
CCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHH
RQLAGMGYIGFAIDMYGNAKLGKDKAEKRALMTPFRENRGKLITRINAAFNKVVQLPEVD
HHHHCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCHHCCCCEEEHHHHHHHHHHCCCCCC
SEKVAAIGYCFGGLCVLDLIRSGAPLKGVVSFHGVLLPLEGESNKSLNAKVLILHGYDDP
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEECCCCCCCCCEEEEEEECCCCC
LVPIEQVNQFAIEMTERKVDWQVHVYGQTAHSFTDPGANDDEMGLHYNKLADQRSWQSTQ
CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHH
LFLQELFA
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA