Click here to switch to the map view.

The map label for this gene is 52842843

Identifier: 52842843

GI number: 52842843

Start: 2978466

End: 2979677

Strand: Reverse

Name: 52842843

Synonym: lpg2637

Alternate gene names: NA

Gene position: 2979677-2978466 (Counterclockwise)

Preceding gene: 52842844

Following gene: 52842841

Centisome position: 87.7

GC content: 39.36

Gene sequence:

>1212_bases
ATGTTTTTAACCATAAATGATTTACAAAGCCAAGTTCAATTGGCTAAAAAGAGACTGTATGCTTTAGCCAAAAATTGGCT
GGATACTCAAAAGGAAGCAATCAATTCAAAAGATAAGGCAAATTGGCTCAATGCATTTCAAGCCTCGACAAAAGAAGCAA
TGCAGGAGCAATTAAAAGCCACAGGTTTTCCCCTGATCCGCAATGCAATATTGGTCAATCAATCGGAGGATGAACTTCCG
CAGCATAGTCTGGAGCAATCCTCGTCTTTGATCCACTCAGAAAATTTCCCCGAGCAATTCAACTCAAGAACAGTGCCCAG
AGTGATTTATGTATGCCACTCAGGAGAAAATAATCAAGTAATCAAGAGATTATGCCAACTTACTACCTTAATGGAACAAT
TGCATACATTGGAGGAGTTAACCTTTGAAGTCCAAACTAATGTTCATTTTAGAGGCTTAAATTTGGCTTATCGCATGGCA
CGCAGTATCAATAAGGAGTGGCGCGATGTCGAAAAGGGTCGTGAAACTGTAGAGTATTATGCGGAGCGTCTGCAGATAGC
AGAAAAACAATATAAATTGGCATCGGATTTTTGTCATGAGTGTTTAGGGATTTATAAGGAGCAATTGGATGCACGGATAA
TGTACTTTAATGAATCATTAAATTTCTTTGTTGAGTGCCTGGTTGCCGCTTTTTCCTCTGTAAAAGACGACAGGTATTGG
CTAACAAAATTTTTACTACCCTCTTTACCTTGGCATAGCATGCTTAATGAGGTAGCCACATGGCTCTTTACTACAAATGG
CTTTACTAACCCGACAATCGACAGCATTGAAGTGAATCGCTCACATTTAAAAGCAATTACAGAACAATTTGCCAAATTGA
TGATGGCGCCTTTTTGTTCTTTGGAAAAAGAGTTACAGGGCAAAATAGAAAAAGTAGAGAATGAGCAAAAAATAGCCAGA
GAAAATGTGTATGCCATGTCCTCGGAATTGGATATAGTGATACACATGCAGTCACAAAGAAAATTAGCCGCATTGCTGTT
CCCTGCTCAACCATTAAGTATGTTAGGCTTTTTCCAGGGGGTTGCAGCAGCAATGGGTAGAGATTATTTTTATTCAACTT
TTATCAAAGGGAATCAAAGCCAAGAACCCAGGATAACAGATGATGAAAAACCCCTCATCGAGGCAAGCAATTATTCCAAC
GGGCTACACTAG

Upstream 100 bases:

>100_bases
TGCATTAAAATATCCGCTTATGAATGAATTTTTTTGATTGAAGTATGTATTTTAGAGTGATAGATTAAGGACACTCAAGC
AAACAAGTGAGCATAAAAGG

Downstream 100 bases:

>100_bases
GGAACCGAACCGGGAATTCCGGTTCGGTAGTTTCGAACTTAGAGCGACGGAAACTCTCGATTAGGCAGCCATAGCTTTAA
GACGTGCAACCAGACGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MFLTINDLQSQVQLAKKRLYALAKNWLDTQKEAINSKDKANWLNAFQASTKEAMQEQLKATGFPLIRNAILVNQSEDELP
QHSLEQSSSLIHSENFPEQFNSRTVPRVIYVCHSGENNQVIKRLCQLTTLMEQLHTLEELTFEVQTNVHFRGLNLAYRMA
RSINKEWRDVEKGRETVEYYAERLQIAEKQYKLASDFCHECLGIYKEQLDARIMYFNESLNFFVECLVAAFSSVKDDRYW
LTKFLLPSLPWHSMLNEVATWLFTTNGFTNPTIDSIEVNRSHLKAITEQFAKLMMAPFCSLEKELQGKIEKVENEQKIAR
ENVYAMSSELDIVIHMQSQRKLAALLFPAQPLSMLGFFQGVAAAMGRDYFYSTFIKGNQSQEPRITDDEKPLIEASNYSN
GLH

Sequences:

>Translated_403_residues
MFLTINDLQSQVQLAKKRLYALAKNWLDTQKEAINSKDKANWLNAFQASTKEAMQEQLKATGFPLIRNAILVNQSEDELP
QHSLEQSSSLIHSENFPEQFNSRTVPRVIYVCHSGENNQVIKRLCQLTTLMEQLHTLEELTFEVQTNVHFRGLNLAYRMA
RSINKEWRDVEKGRETVEYYAERLQIAEKQYKLASDFCHECLGIYKEQLDARIMYFNESLNFFVECLVAAFSSVKDDRYW
LTKFLLPSLPWHSMLNEVATWLFTTNGFTNPTIDSIEVNRSHLKAITEQFAKLMMAPFCSLEKELQGKIEKVENEQKIAR
ENVYAMSSELDIVIHMQSQRKLAALLFPAQPLSMLGFFQGVAAAMGRDYFYSTFIKGNQSQEPRITDDEKPLIEASNYSN
GLH
>Mature_403_residues
MFLTINDLQSQVQLAKKRLYALAKNWLDTQKEAINSKDKANWLNAFQASTKEAMQEQLKATGFPLIRNAILVNQSEDELP
QHSLEQSSSLIHSENFPEQFNSRTVPRVIYVCHSGENNQVIKRLCQLTTLMEQLHTLEELTFEVQTNVHFRGLNLAYRMA
RSINKEWRDVEKGRETVEYYAERLQIAEKQYKLASDFCHECLGIYKEQLDARIMYFNESLNFFVECLVAAFSSVKDDRYW
LTKFLLPSLPWHSMLNEVATWLFTTNGFTNPTIDSIEVNRSHLKAITEQFAKLMMAPFCSLEKELQGKIEKVENEQKIAR
ENVYAMSSELDIVIHMQSQRKLAALLFPAQPLSMLGFFQGVAAAMGRDYFYSTFIKGNQSQEPRITDDEKPLIEASNYSN
GLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46600; Mature: 46600

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLTINDLQSQVQLAKKRLYALAKNWLDTQKEAINSKDKANWLNAFQASTKEAMQEQLKA
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TGFPLIRNAILVNQSEDELPQHSLEQSSSLIHSENFPEQFNSRTVPRVIYVCHSGENNQV
CCCHHHHHHHHCCCCHHHCHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEECCCCHHH
IKRLCQLTTLMEQLHTLEELTFEVQTNVHFRGLNLAYRMARSINKEWRDVEKGRETVEYY
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AERLQIAEKQYKLASDFCHECLGIYKEQLDARIMYFNESLNFFVECLVAAFSSVKDDRYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHCCCHHHH
LTKFLLPSLPWHSMLNEVATWLFTTNGFTNPTIDSIEVNRSHLKAITEQFAKLMMAPFCS
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHH
LEKELQGKIEKVENEQKIARENVYAMSSELDIVIHMQSQRKLAALLFPAQPLSMLGFFQG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHH
VAAAMGRDYFYSTFIKGNQSQEPRITDDEKPLIEASNYSNGLH
HHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MFLTINDLQSQVQLAKKRLYALAKNWLDTQKEAINSKDKANWLNAFQASTKEAMQEQLKA
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TGFPLIRNAILVNQSEDELPQHSLEQSSSLIHSENFPEQFNSRTVPRVIYVCHSGENNQV
CCCHHHHHHHHCCCCHHHCHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEECCCCHHH
IKRLCQLTTLMEQLHTLEELTFEVQTNVHFRGLNLAYRMARSINKEWRDVEKGRETVEYY
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AERLQIAEKQYKLASDFCHECLGIYKEQLDARIMYFNESLNFFVECLVAAFSSVKDDRYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHCCCHHHH
LTKFLLPSLPWHSMLNEVATWLFTTNGFTNPTIDSIEVNRSHLKAITEQFAKLMMAPFCS
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHH
LEKELQGKIEKVENEQKIARENVYAMSSELDIVIHMQSQRKLAALLFPAQPLSMLGFFQG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHH
VAAAMGRDYFYSTFIKGNQSQEPRITDDEKPLIEASNYSNGLH
HHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA