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The map label for this gene is csaA

Identifier: 52842755

GI number: 52842755

Start: 2880193

End: 2880528

Strand: Reverse

Name: csaA

Synonym: lpg2547

Alternate gene names: 52842755

Gene position: 2880528-2880193 (Counterclockwise)

Preceding gene: 52842756

Following gene: 52842754

Centisome position: 84.78

GC content: 43.45

Gene sequence:

>336_bases
ATGACGATATCTTATGAAGAATTTGAAAAAGTCGATTTGCGTTCCGGTACCGTTGTGAAAGCAGAACCATTCCTGCGTGC
CAGGAAACCTGCCTATAAAGTTTGGGTGGATTTTGGTGCCGATATTGGCGTTCTCCAAACCTCTGCGCAAATAACAGTGC
ATTATACGCCGGAAGCATTGATAGGGCGGATAGTTATTGGATGCGTGAATTTAGGGGAGAAAAATATTGCCGGGTTCCTC
TCTCAATTTCTATTGCTTGGTTTTTCAGATGAGAAGGGTGCTATATGTCTGGCTTCCGTTGAGCCTCATGTTCCTAATGG
TAAAAAAATGCACTGA

Upstream 100 bases:

>100_bases
CTGGATATTTCTTGGTGAGCAATTAACGATAGGGCAAATAATTGGAATGGGCATGGTTATACTTTCAATTACAGTCTATG
CAAAACGTTGAGGTGGAAAA

Downstream 100 bases:

>100_bases
TTCCTATCTGAAATATTGATACATCATCATTATCAACTATGGATTTGTTTTTAGCTCCGTTGATTACATTCATTGATATT
AAAAATAATAATATCAGATA

Product: chaperonin CsaA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTISYEEFEKVDLRSGTVVKAEPFLRARKPAYKVWVDFGADIGVLQTSAQITVHYTPEALIGRIVIGCVNLGEKNIAGFL
SQFLLLGFSDEKGAICLASVEPHVPNGKKMH

Sequences:

>Translated_111_residues
MTISYEEFEKVDLRSGTVVKAEPFLRARKPAYKVWVDFGADIGVLQTSAQITVHYTPEALIGRIVIGCVNLGEKNIAGFL
SQFLLLGFSDEKGAICLASVEPHVPNGKKMH
>Mature_110_residues
TISYEEFEKVDLRSGTVVKAEPFLRARKPAYKVWVDFGADIGVLQTSAQITVHYTPEALIGRIVIGCVNLGEKNIAGFLS
QFLLLGFSDEKGAICLASVEPHVPNGKKMH

Specific function: Could serves as a molecular chaperone for exported proteins or alternatively acts by stabilizing the secA protein [H]

COG id: COG0073

COG function: function code R; EMAP domain

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR008231
- InterPro:   IPR002547 [H]

Pfam domain/function: PF01588 tRNA_bind [H]

EC number: NA

Molecular weight: Translated: 12178; Mature: 12047

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS50886 TRBD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISYEEFEKVDLRSGTVVKAEPFLRARKPAYKVWVDFGADIGVLQTSAQITVHYTPEAL
CCCCHHHHHEECCCCCCEEECCCCHHCCCCEEEEEEECCCCCCEEECCCEEEEEECHHHH
IGRIVIGCVNLGEKNIAGFLSQFLLLGFSDEKGAICLASVEPHVPNGKKMH
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TISYEEFEKVDLRSGTVVKAEPFLRARKPAYKVWVDFGADIGVLQTSAQITVHYTPEAL
CCCHHHHHEECCCCCCEEECCCCHHCCCCEEEEEEECCCCCCEEECCCEEEEEECHHHH
IGRIVIGCVNLGEKNIAGFLSQFLLLGFSDEKGAICLASVEPHVPNGKKMH
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1435734; 9384377 [H]