Click here to switch to the map view.

The map label for this gene is 52842737

Identifier: 52842737

GI number: 52842737

Start: 2859811

End: 2861529

Strand: Reverse

Name: 52842737

Synonym: lpg2529

Alternate gene names: NA

Gene position: 2861529-2859811 (Counterclockwise)

Preceding gene: 52842742

Following gene: 52842735

Centisome position: 84.22

GC content: 37.99

Gene sequence:

>1719_bases
GTGGTGAGGGTTTTGAATTTACAAAAAGGAGTCAATATGTTTAATGTGGATAATAGTGGTAAAGGCAATTGCTTGTATTA
TGCTTACAGTATTTCATTAATGTATTATTTGCGGGCAAAAAATAATGTCAAGATTACTGAAGATATTTTTAACAAATTAG
GATTAAAGGAAGAAGATAGGGCCCGTTTACGAAAACTATTATCCAAAGACCCTGACAGGGCGTTTACCCGTGATGAAATC
AAAACAATCATAGAACCCATTCTTGGCAGGGCAACGAGAGATTTGGCAGCGGAACATACCAAAGTCGAATTCAAATCTTC
ACCTCATGATACGCCTTTATTTTCATCTCTCCATTATGCTGTGGAATTTGGTTTTAAACGCTCACTACAAATCAATGAAT
CCGAGTTGACGCTGTTAATAGACAATGATTTTTCGAATCCTGATTATACTGAGGCCGAGATATACAAGGTAAGTGGTTTG
TTGGATGCTCTTCAGGAGTATATTTTAACAAGAACACCTTCTGTCATAGAAGAATTCAATCGCCAATGGGAAAATAAAAA
ACAGGAACTCAAAGAGCAAAGCTTAACTGAAAAAGAGATCCAGGTTCATCAGGCGACTATTTTAGATAATATCCTAAGAA
AAGAAACGATAGATTTTTTATTAGCTGAGAATGAAAAACATCTTGATGAATACAGAGAGCATCTTCGAAGAGAGTTCGTA
TGGGGTAGTGAAGAAACACTGATGGTTTTACATCGCGCCATACAAGGTGAACGCATGGTACGTAACCATGAGGGAAGAAT
TGAGCCTGTCTATGATCATGAAATTATTTTGCATGTTCATAGAAATGGAGCAAGTCCGTCCTATCAGGCAGGCAGTCCGG
AAATGATATTAAATAATGAAGGCAATGTTCATTGGACTTCTATCATTCCTGATGCGATATTTACCTCAAAACTAACAGAC
AAAGAAGAAAAACTACTCGACATGCTGGAGCGGATGCAGTCAGAGTATGGCAGCAAAGAGCTTGGGGTAGAAAAATACTC
TTCGATAAGTGATTGGCTTAGTGATTTGATGAAGCAGATAGAGCTTATTAAAACCAGCCCAACTGCTGTGACAAAACAAA
AAGAAATTGAATTGTTTTTTCAGCTTCTGGCTAAAGCAACACCTAAATTAGCATCGGAACCTGCCTTGAGGATGTCGCTT
GGTACTCTTTTTTCCAATTTTCTCGAATGCATTCCAGCCCTTATGGTTGAAAATAAACTCAGCACAGGCTTAGCTAAATT
TGGATTGTATAGTCCTGTAATATCTCAGAAAAAAGAAGATTTGTCCTTGACCAAATCATCTGAGGAGAAAGTTAATTCTG
AACAGCCTCAAAAGGGCGTATTAAGTCAATTCTCGAAACATACTCTGCTTAAGGTATCTGAGGATGTAAGCCCAAAACCA
TACCCTACAGAACTAAACCCGTATGTTCGAAAAAACAAGCAGTCTGGTCCACGAGTAGCGAGAGCACTCACCCAAATGTA
CCAAAAAGGACTTGAAGGTGATGAAAGATATACGCCAGAAAAGTGCAAAGACATTGCGCAGAGGTATATAGAGTATTCGA
AATCTCATAAACGCAATTTCATTCTTGATGATGTCATCCTCTTTGTGCAGGAAATGGATAAAATCATTAAGCAACAAGAA
TCAATTAGTGAAAACTCCTCTAAGCGTGCTGCAATGTAA

Upstream 100 bases:

>100_bases
CTTATATCACTGAGTATCAGTCCATTACCAGAAAAGAACTCATGAATCTTTCAAATAATGAAATCAAACCAAGGAGGAAA
AGCAATAAGAGACTATTAAT

Downstream 100 bases:

>100_bases
GGGTGCTGTTTTTGCTGAAGTGTGGGAAAAACAACATCGTCAGATTGATTTTGCTTTCTTATCAAGTGGTGACTTAATTG
GTGAGGAAGCAAAATAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MVRVLNLQKGVNMFNVDNSGKGNCLYYAYSISLMYYLRAKNNVKITEDIFNKLGLKEEDRARLRKLLSKDPDRAFTRDEI
KTIIEPILGRATRDLAAEHTKVEFKSSPHDTPLFSSLHYAVEFGFKRSLQINESELTLLIDNDFSNPDYTEAEIYKVSGL
LDALQEYILTRTPSVIEEFNRQWENKKQELKEQSLTEKEIQVHQATILDNILRKETIDFLLAENEKHLDEYREHLRREFV
WGSEETLMVLHRAIQGERMVRNHEGRIEPVYDHEIILHVHRNGASPSYQAGSPEMILNNEGNVHWTSIIPDAIFTSKLTD
KEEKLLDMLERMQSEYGSKELGVEKYSSISDWLSDLMKQIELIKTSPTAVTKQKEIELFFQLLAKATPKLASEPALRMSL
GTLFSNFLECIPALMVENKLSTGLAKFGLYSPVISQKKEDLSLTKSSEEKVNSEQPQKGVLSQFSKHTLLKVSEDVSPKP
YPTELNPYVRKNKQSGPRVARALTQMYQKGLEGDERYTPEKCKDIAQRYIEYSKSHKRNFILDDVILFVQEMDKIIKQQE
SISENSSKRAAM

Sequences:

>Translated_572_residues
MVRVLNLQKGVNMFNVDNSGKGNCLYYAYSISLMYYLRAKNNVKITEDIFNKLGLKEEDRARLRKLLSKDPDRAFTRDEI
KTIIEPILGRATRDLAAEHTKVEFKSSPHDTPLFSSLHYAVEFGFKRSLQINESELTLLIDNDFSNPDYTEAEIYKVSGL
LDALQEYILTRTPSVIEEFNRQWENKKQELKEQSLTEKEIQVHQATILDNILRKETIDFLLAENEKHLDEYREHLRREFV
WGSEETLMVLHRAIQGERMVRNHEGRIEPVYDHEIILHVHRNGASPSYQAGSPEMILNNEGNVHWTSIIPDAIFTSKLTD
KEEKLLDMLERMQSEYGSKELGVEKYSSISDWLSDLMKQIELIKTSPTAVTKQKEIELFFQLLAKATPKLASEPALRMSL
GTLFSNFLECIPALMVENKLSTGLAKFGLYSPVISQKKEDLSLTKSSEEKVNSEQPQKGVLSQFSKHTLLKVSEDVSPKP
YPTELNPYVRKNKQSGPRVARALTQMYQKGLEGDERYTPEKCKDIAQRYIEYSKSHKRNFILDDVILFVQEMDKIIKQQE
SISENSSKRAAM
>Mature_572_residues
MVRVLNLQKGVNMFNVDNSGKGNCLYYAYSISLMYYLRAKNNVKITEDIFNKLGLKEEDRARLRKLLSKDPDRAFTRDEI
KTIIEPILGRATRDLAAEHTKVEFKSSPHDTPLFSSLHYAVEFGFKRSLQINESELTLLIDNDFSNPDYTEAEIYKVSGL
LDALQEYILTRTPSVIEEFNRQWENKKQELKEQSLTEKEIQVHQATILDNILRKETIDFLLAENEKHLDEYREHLRREFV
WGSEETLMVLHRAIQGERMVRNHEGRIEPVYDHEIILHVHRNGASPSYQAGSPEMILNNEGNVHWTSIIPDAIFTSKLTD
KEEKLLDMLERMQSEYGSKELGVEKYSSISDWLSDLMKQIELIKTSPTAVTKQKEIELFFQLLAKATPKLASEPALRMSL
GTLFSNFLECIPALMVENKLSTGLAKFGLYSPVISQKKEDLSLTKSSEEKVNSEQPQKGVLSQFSKHTLLKVSEDVSPKP
YPTELNPYVRKNKQSGPRVARALTQMYQKGLEGDERYTPEKCKDIAQRYIEYSKSHKRNFILDDVILFVQEMDKIIKQQE
SISENSSKRAAM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66016; Mature: 66016

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRVLNLQKGVNMFNVDNSGKGNCLYYAYSISLMYYLRAKNNVKITEDIFNKLGLKEEDR
CEEEEEHHHCCCEEECCCCCCCCEEEEEHHHHHHHHEECCCCCEEHHHHHHHCCCCCHHH
ARLRKLLSKDPDRAFTRDEIKTIIEPILGRATRDLAAEHTKVEFKSSPHDTPLFSSLHYA
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHH
VEFGFKRSLQINESELTLLIDNDFSNPDYTEAEIYKVSGLLDALQEYILTRTPSVIEEFN
HHHCCCCCCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RQWENKKQELKEQSLTEKEIQVHQATILDNILRKETIDFLLAENEKHLDEYREHLRREFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
WGSEETLMVLHRAIQGERMVRNHEGRIEPVYDHEIILHVHRNGASPSYQAGSPEMILNNE
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCEEECCC
GNVHWTSIIPDAIFTSKLTDKEEKLLDMLERMQSEYGSKELGVEKYSSISDWLSDLMKQI
CCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHH
ELIKTSPTAVTKQKEIELFFQLLAKATPKLASEPALRMSLGTLFSNFLECIPALMVENKL
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
STGLAKFGLYSPVISQKKEDLSLTKSSEEKVNSEQPQKGVLSQFSKHTLLKVSEDVSPKP
HHHHHHHHHHHHHHHCCHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCCC
YPTELNPYVRKNKQSGPRVARALTQMYQKGLEGDERYTPEKCKDIAQRYIEYSKSHKRNF
CCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH
ILDDVILFVQEMDKIIKQQESISENSSKRAAM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVRVLNLQKGVNMFNVDNSGKGNCLYYAYSISLMYYLRAKNNVKITEDIFNKLGLKEEDR
CEEEEEHHHCCCEEECCCCCCCCEEEEEHHHHHHHHEECCCCCEEHHHHHHHCCCCCHHH
ARLRKLLSKDPDRAFTRDEIKTIIEPILGRATRDLAAEHTKVEFKSSPHDTPLFSSLHYA
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHH
VEFGFKRSLQINESELTLLIDNDFSNPDYTEAEIYKVSGLLDALQEYILTRTPSVIEEFN
HHHCCCCCCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RQWENKKQELKEQSLTEKEIQVHQATILDNILRKETIDFLLAENEKHLDEYREHLRREFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
WGSEETLMVLHRAIQGERMVRNHEGRIEPVYDHEIILHVHRNGASPSYQAGSPEMILNNE
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCEEECCC
GNVHWTSIIPDAIFTSKLTDKEEKLLDMLERMQSEYGSKELGVEKYSSISDWLSDLMKQI
CCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHH
ELIKTSPTAVTKQKEIELFFQLLAKATPKLASEPALRMSLGTLFSNFLECIPALMVENKL
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
STGLAKFGLYSPVISQKKEDLSLTKSSEEKVNSEQPQKGVLSQFSKHTLLKVSEDVSPKP
HHHHHHHHHHHHHHHCCHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCCC
YPTELNPYVRKNKQSGPRVARALTQMYQKGLEGDERYTPEKCKDIAQRYIEYSKSHKRNF
CCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH
ILDDVILFVQEMDKIIKQQESISENSSKRAAM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA