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The map label for this gene is 52842730

Identifier: 52842730

GI number: 52842730

Start: 2847831

End: 2848985

Strand: Reverse

Name: 52842730

Synonym: lpg2522

Alternate gene names: NA

Gene position: 2848985-2847831 (Counterclockwise)

Preceding gene: 52842734

Following gene: 52842728

Centisome position: 83.85

GC content: 37.84

Gene sequence:

>1155_bases
TTGAACTTTGTGATGAATTATCTCATGAAAGAAAAATACATCGGGCTTCATAAGATAGAACTAAATACCCCATGCCTTGT
GATTGATTATGAAAAGCTGAAATACAACTTAAAAGTGATGCAACAACATGGTTTCGAATGGGGCATAGGAATAAGACCGC
ATTGTAAAACTCATAAATGTACTCAAATCGCACGTTTACAACTTGAATATGGGGCAATAGGGATTTCTGCCGCCAAACTA
TCAGAGGCTGAAGTATTGGTATCCAAACAAATCACGAATGTCTTAATTACTTCACCCATTGTATCGGAAGCCAAGTATTC
AAGATTATTTAATTGTCTTAAATCAGCGCCTGATTTAATGCTGGTTGTAGATGGCAAGGATAATATTCGCATGCTTAATG
AGCTTGGAAAGTCGCTAAACCAGCCAGTTTATGTCTTGCTTGATATCGATTCAGGCATTGGTCGAACGGGCATTAATCCC
GAGGTAGCTTTGGAATATGGTCATTTTATCAATAGTATGAATTGGCTTAAGCTAAAAGGAATTCAATGTTATGCAGGCCA
CTTGCAACACATTCAAAACTATGAAGAGAGAAAAGCGTTTTCTCTACGTATTATGGATATGGCCAGCAGGATTGTTAAGA
GTTTTAGAGATGCCAATCTCCCTTGTGAAATATTAACTGGCACCGGAACTGGTACTTTTGATATTGATGTCGAAGCAAGT
GAAGTAACAGAAATCCAGCCTGGCTCATATGCTGTAATGGATGTTGAGTATGGTTCAATTGGTTCAAAAAATAACCCATC
AAGCTTTCAGCCATTTAAAAACTCGATGACTCTTTTAACAAGTGTTATAAGCAGTAATCGTAAAGAGCACGCTACTGTTG
ATGCTGGAACGAAATCGATTTATGTCGATCCTCATCATAAACCACATATTATTAGTCATCCCGGACTGGTTTATGATTGG
GGTGGGTTTGGAGATGAGCATGGCAAGGTATTTTCTTGTGAAGGCGGAAGTCATTTCCTGCAAAATGGCGATGTTTTAGA
GCTTATCGTTCCTCATTGTGATCCGACAATAAACTTGTATGATAAGTTTTATATCACAGAAAATAATGTTGTTGTCGATA
TTTGGGATATCGACATGCGTGGAAAATCACAATAA

Upstream 100 bases:

>100_bases
AATTTTATATTGATCTTTGAGGATTAGGATGCTCATCTTTTAAAAAATAGTTTAATAAAAGCTTAAATTCCTAAGCAATT
TATGTCATAAAACGCATTTA

Downstream 100 bases:

>100_bases
TCTATACTATTTAACCAGGTGTTTGAGCTTCATATTTTTGCTAGACAGGAGGAGGGCCACGACGCCCGAGTAATCCCATA
ATAAGAAATATGACAAACAT

Product: metal-activated pyridoxal enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MNFVMNYLMKEKYIGLHKIELNTPCLVIDYEKLKYNLKVMQQHGFEWGIGIRPHCKTHKCTQIARLQLEYGAIGISAAKL
SEAEVLVSKQITNVLITSPIVSEAKYSRLFNCLKSAPDLMLVVDGKDNIRMLNELGKSLNQPVYVLLDIDSGIGRTGINP
EVALEYGHFINSMNWLKLKGIQCYAGHLQHIQNYEERKAFSLRIMDMASRIVKSFRDANLPCEILTGTGTGTFDIDVEAS
EVTEIQPGSYAVMDVEYGSIGSKNNPSSFQPFKNSMTLLTSVISSNRKEHATVDAGTKSIYVDPHHKPHIISHPGLVYDW
GGFGDEHGKVFSCEGGSHFLQNGDVLELIVPHCDPTINLYDKFYITENNVVVDIWDIDMRGKSQ

Sequences:

>Translated_384_residues
MNFVMNYLMKEKYIGLHKIELNTPCLVIDYEKLKYNLKVMQQHGFEWGIGIRPHCKTHKCTQIARLQLEYGAIGISAAKL
SEAEVLVSKQITNVLITSPIVSEAKYSRLFNCLKSAPDLMLVVDGKDNIRMLNELGKSLNQPVYVLLDIDSGIGRTGINP
EVALEYGHFINSMNWLKLKGIQCYAGHLQHIQNYEERKAFSLRIMDMASRIVKSFRDANLPCEILTGTGTGTFDIDVEAS
EVTEIQPGSYAVMDVEYGSIGSKNNPSSFQPFKNSMTLLTSVISSNRKEHATVDAGTKSIYVDPHHKPHIISHPGLVYDW
GGFGDEHGKVFSCEGGSHFLQNGDVLELIVPHCDPTINLYDKFYITENNVVVDIWDIDMRGKSQ
>Mature_384_residues
MNFVMNYLMKEKYIGLHKIELNTPCLVIDYEKLKYNLKVMQQHGFEWGIGIRPHCKTHKCTQIARLQLEYGAIGISAAKL
SEAEVLVSKQITNVLITSPIVSEAKYSRLFNCLKSAPDLMLVVDGKDNIRMLNELGKSLNQPVYVLLDIDSGIGRTGINP
EVALEYGHFINSMNWLKLKGIQCYAGHLQHIQNYEERKAFSLRIMDMASRIVKSFRDANLPCEILTGTGTGTFDIDVEAS
EVTEIQPGSYAVMDVEYGSIGSKNNPSSFQPFKNSMTLLTSVISSNRKEHATVDAGTKSIYVDPHHKPHIISHPGLVYDW
GGFGDEHGKVFSCEGGSHFLQNGDVLELIVPHCDPTINLYDKFYITENNVVVDIWDIDMRGKSQ

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 43078; Mature: 43078

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFVMNYLMKEKYIGLHKIELNTPCLVIDYEKLKYNLKVMQQHGFEWGIGIRPHCKTHKC
CHHHHHHHHHHHCCCEEEEEECCCEEEEEHHHHHEEEEEHHHCCCEECCCCCCCCCCCHH
TQIARLQLEYGAIGISAAKLSEAEVLVSKQITNVLITSPIVSEAKYSRLFNCLKSAPDLM
HHEEEEEEEECEEEEEHHHCCHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCEE
LVVDGKDNIRMLNELGKSLNQPVYVLLDIDSGIGRTGINPEVALEYGHFINSMNWLKLKG
EEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHEEEEHHHHHCCCCEEEEEC
IQCYAGHLQHIQNYEERKAFSLRIMDMASRIVKSFRDANLPCEILTGTGTGTFDIDVEAS
EEEHHHHHHHHHCHHHHHHEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEHH
EVTEIQPGSYAVMDVEYGSIGSKNNPSSFQPFKNSMTLLTSVISSNRKEHATVDAGTKSI
HCCEECCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCEEE
YVDPHHKPHIISHPGLVYDWGGFGDEHGKVFSCEGGSHFLQNGDVLELIVPHCDPTINLY
EECCCCCCEEECCCCEEEECCCCCCCCCEEEEECCCCHHHCCCCEEEEEECCCCCCEEEE
DKFYITENNVVVDIWDIDMRGKSQ
EEEEEECCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MNFVMNYLMKEKYIGLHKIELNTPCLVIDYEKLKYNLKVMQQHGFEWGIGIRPHCKTHKC
CHHHHHHHHHHHCCCEEEEEECCCEEEEEHHHHHEEEEEHHHCCCEECCCCCCCCCCCHH
TQIARLQLEYGAIGISAAKLSEAEVLVSKQITNVLITSPIVSEAKYSRLFNCLKSAPDLM
HHEEEEEEEECEEEEEHHHCCHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCEE
LVVDGKDNIRMLNELGKSLNQPVYVLLDIDSGIGRTGINPEVALEYGHFINSMNWLKLKG
EEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHEEEEHHHHHCCCCEEEEEC
IQCYAGHLQHIQNYEERKAFSLRIMDMASRIVKSFRDANLPCEILTGTGTGTFDIDVEAS
EEEHHHHHHHHHCHHHHHHEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEHH
EVTEIQPGSYAVMDVEYGSIGSKNNPSSFQPFKNSMTLLTSVISSNRKEHATVDAGTKSI
HCCEECCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCEEE
YVDPHHKPHIISHPGLVYDWGGFGDEHGKVFSCEGGSHFLQNGDVLELIVPHCDPTINLY
EECCCCCCEEECCCCEEEECCCCCCCCCEEEEECCCCHHHCCCCEEEEEECCCCCCEEEE
DKFYITENNVVVDIWDIDMRGKSQ
EEEEEECCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]