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The map label for this gene is vhuG [H]

Identifier: 52842676

GI number: 52842676

Start: 2782650

End: 2783435

Strand: Reverse

Name: vhuG [H]

Synonym: lpg2468

Alternate gene names: 52842676

Gene position: 2783435-2782650 (Counterclockwise)

Preceding gene: 52842677

Following gene: 52842675

Centisome position: 81.92

GC content: 41.22

Gene sequence:

>786_bases
ATGAAACCGCGTATCGCTGTATATAAATTTACTTCTTGTGATGGATGTCAATTGGCATTTTTAAATGCGGGTGAATCGTT
GTTAACTTTATCAGACTTGGTTGAAATTGTGCATTTTGCAGAGGCAGGTATGGTGGATGTGGATATGAAAGTGGATATCG
CATTTGTGGAAGGCAGTATTTCAACTCCTGATGAAGAGCATCGAATACGTAAAATTCGTGAAAACAGTCAATACCTTATT
ACCATAGGTGCTTGCGCTACAGCGGGCGGTATACAAGCCTTACGTAATTTTGCAGACTCCAGGGAATGGATGGCCAGTGT
TTATGCGTCACCGGATTATATCAAGACTTTAACTACATCCACGGCTATTGCGCATCACGTTAAAGTGGATTGGGAGTTAT
GGGGGTGTCCTGTAAATAGCGGGCAGATATTGGAGGCGATTCGTTTTTTATTATCTAATGCGACTCCCAAAATAAAAAGA
GATTCTGAATGTATGGAGTGCAAACGAAAAGGGAATGTGTGTGTGCTGGTGACCAAAAAACAACCTTGTATGGGGCCAGT
AACTCAAACAGGCTGTGGGTCGCTTTGCCCCACTTTAGGCAGAGCATGCTATGCTTGTTATGGGCCAAAAGAAAATGCTA
ATCCCAATTCTTTGGGAGAGTGGTTTTTATCTATCGGATTAACCAAAGAAGCGATTGCCAGGCAGTTTTTACATATTAAT
AATCAGGCACCTGCATTTAATCAAGCCGGAAATTACTTTAAGGGAATTAAAATTAGCAATGGGTAA

Upstream 100 bases:

>100_bases
ACGGTGGTTTATTCGTGTGTAAAGATGGTCCTGTATTTGCTTATTCTCAAGTTAAAGAGTTATTCAAAGAATCTGGATTT
TAAAGTGTCTGAGGAACGCT

Downstream 100 bases:

>100_bases
AGACATTTCAATTAATGTTCCAATTTTGGCGCGGGTGGAAGGAGAGGGGGCTCTTGAACTTTGCATTCGGGATAGCAAAA
TTGAAACATTAAAATTAAAA

Product: sulfhydrogenase delta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKPRIAVYKFTSCDGCQLAFLNAGESLLTLSDLVEIVHFAEAGMVDVDMKVDIAFVEGSISTPDEEHRIRKIRENSQYLI
TIGACATAGGIQALRNFADSREWMASVYASPDYIKTLTTSTAIAHHVKVDWELWGCPVNSGQILEAIRFLLSNATPKIKR
DSECMECKRKGNVCVLVTKKQPCMGPVTQTGCGSLCPTLGRACYACYGPKENANPNSLGEWFLSIGLTKEAIARQFLHIN
NQAPAFNQAGNYFKGIKISNG

Sequences:

>Translated_261_residues
MKPRIAVYKFTSCDGCQLAFLNAGESLLTLSDLVEIVHFAEAGMVDVDMKVDIAFVEGSISTPDEEHRIRKIRENSQYLI
TIGACATAGGIQALRNFADSREWMASVYASPDYIKTLTTSTAIAHHVKVDWELWGCPVNSGQILEAIRFLLSNATPKIKR
DSECMECKRKGNVCVLVTKKQPCMGPVTQTGCGSLCPTLGRACYACYGPKENANPNSLGEWFLSIGLTKEAIARQFLHIN
NQAPAFNQAGNYFKGIKISNG
>Mature_261_residues
MKPRIAVYKFTSCDGCQLAFLNAGESLLTLSDLVEIVHFAEAGMVDVDMKVDIAFVEGSISTPDEEHRIRKIRENSQYLI
TIGACATAGGIQALRNFADSREWMASVYASPDYIKTLTTSTAIAHHVKVDWELWGCPVNSGQILEAIRFLLSNATPKIKR
DSECMECKRKGNVCVLVTKKQPCMGPVTQTGCGSLCPTLGRACYACYGPKENANPNSLGEWFLSIGLTKEAIARQFLHIN
NQAPAFNQAGNYFKGIKISNG

Specific function: Unknown

COG id: COG1941

COG function: function code C; Coenzyme F420-reducing hydrogenase, gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006137 [H]

Pfam domain/function: PF01058 Oxidored_q6 [H]

EC number: NA

Molecular weight: Translated: 28578; Mature: 28578

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRIAVYKFTSCDGCQLAFLNAGESLLTLSDLVEIVHFAEAGMVDVDMKVDIAFVEGSI
CCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEECCC
STPDEEHRIRKIRENSQYLITIGACATAGGIQALRNFADSREWMASVYASPDYIKTLTTS
CCCCHHHHHHHHHCCCCEEEEEECHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TAIAHHVKVDWELWGCPVNSGQILEAIRFLLSNATPKIKRDSECMECKRKGNVCVLVTKK
HHHHEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEECC
QPCMGPVTQTGCGSLCPTLGRACYACYGPKENANPNSLGEWFLSIGLTKEAIARQFLHIN
CCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC
NQAPAFNQAGNYFKGIKISNG
CCCCCCCCCCCEEECEEECCC
>Mature Secondary Structure
MKPRIAVYKFTSCDGCQLAFLNAGESLLTLSDLVEIVHFAEAGMVDVDMKVDIAFVEGSI
CCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEECCC
STPDEEHRIRKIRENSQYLITIGACATAGGIQALRNFADSREWMASVYASPDYIKTLTTS
CCCCHHHHHHHHHCCCCEEEEEECHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TAIAHHVKVDWELWGCPVNSGQILEAIRFLLSNATPKIKRDSECMECKRKGNVCVLVTKK
HHHHEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEECC
QPCMGPVTQTGCGSLCPTLGRACYACYGPKENANPNSLGEWFLSIGLTKEAIARQFLHIN
CCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC
NQAPAFNQAGNYFKGIKISNG
CCCCCCCCCCCEEECEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]