Click here to switch to the map view.

The map label for this gene is 52841310

Identifier: 52841310

GI number: 52841310

Start: 1171592

End: 1171864

Strand: Reverse

Name: 52841310

Synonym: lpg1076

Alternate gene names: NA

Gene position: 1171864-1171592 (Counterclockwise)

Preceding gene: 52841311

Following gene: 52841308

Centisome position: 34.49

GC content: 37.73

Gene sequence:

>273_bases
ATGAAGATGATTTCCCATACTACAACTAAATGTAATACGGGAAAATCATTGTACCTTGTTCAATACACAGCACGCTTGTT
CTTTCGCAGTTTATTTACTCTGTATTTAGAGCCACACGAGTTTGAGCACCATTTGGCATTCCTGCGGCCTATAAAAAACT
TAAGGCAGTCATTACTTTTACAACGTTTCAATCCTTCAAGTCCACAAAGTGAAGTAACATTCGAGAACATATATGCCCCG
AAAGCTAATGGTGGTGGATTATATGGCATATAA

Upstream 100 bases:

>100_bases
ACATCTAAAGTCCAGTAACTACTGGGGTGTTCCACTTGTCCCAGTAGTTCCACGTATTTTTTAGATGTAGGTAAAAATCT
ATTAGGTTGTATCGACTTTA

Downstream 100 bases:

>100_bases
GCAACATGCACTGCCACCAGCCTATTTTCTATGTTTTCAAAAAGGCATTGAATGTTAACATTCACGAGGATTTCGTTAAG
TTTGATTAATAAGTTATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MKMISHTTTKCNTGKSLYLVQYTARLFFRSLFTLYLEPHEFEHHLAFLRPIKNLRQSLLLQRFNPSSPQSEVTFENIYAP
KANGGGLYGI

Sequences:

>Translated_90_residues
MKMISHTTTKCNTGKSLYLVQYTARLFFRSLFTLYLEPHEFEHHLAFLRPIKNLRQSLLLQRFNPSSPQSEVTFENIYAP
KANGGGLYGI
>Mature_90_residues
MKMISHTTTKCNTGKSLYLVQYTARLFFRSLFTLYLEPHEFEHHLAFLRPIKNLRQSLLLQRFNPSSPQSEVTFENIYAP
KANGGGLYGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10423; Mature: 10423

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMISHTTTKCNTGKSLYLVQYTARLFFRSLFTLYLEPHEFEHHLAFLRPIKNLRQSLLL
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QRFNPSSPQSEVTFENIYAPKANGGGLYGI
HHCCCCCCCCCCCHHHEECCCCCCCCCCCC
>Mature Secondary Structure
MKMISHTTTKCNTGKSLYLVQYTARLFFRSLFTLYLEPHEFEHHLAFLRPIKNLRQSLLL
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QRFNPSSPQSEVTFENIYAPKANGGGLYGI
HHCCCCCCCCCCCHHHEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA