Click here to switch to the map view.

The map label for this gene is 52841289

Identifier: 52841289

GI number: 52841289

Start: 1151869

End: 1152309

Strand: Reverse

Name: 52841289

Synonym: lpg1055

Alternate gene names: NA

Gene position: 1152309-1151869 (Counterclockwise)

Preceding gene: 52841293

Following gene: 52841288

Centisome position: 33.91

GC content: 39.23

Gene sequence:

>441_bases
ATGTTAAAAAGGAATGCATTCATTTTATTGGCCGCTTGCAGTTTGGTTGCCATGCCACTCTTTGCAGAAGACATGTCTTC
TGGTTCTCAAATGAATAATATGGGAATGCAAAGCTCTAATCAGCAGTCAACCCAACTGCAAGACGAAATGAAACAAATGC
AAGAAGCACTAAAACAAATGCAACAGATGCATGATAAGCTTATGAATGCAAAAACAACGGAAGAAAAGAAATCGTTGATG
CAAACACAAATGCCCATGATGGAAGAAGGCATGCACACCATGCAAAAAGGCATGAAGATGATGCAAAGTATGCACGATGA
TACAGCAAAACAACCCGAGATGATGGATCAACGTATGAAAATGATGCAAATGATGACGCAAATGATGCAGATGATGATGG
ATAGGCAAATGATGGGATGTCCCATGATGAAAAACCAATAA

Upstream 100 bases:

>100_bases
ACTTGGTATGTCTTTTGCTTTTCATGGCCAACGCTTATAGTGCTGTGATAGGATGTTCAGCTCGGACAATTCATTGAAAA
AATAATAAGGAGATTTCATT

Downstream 100 bases:

>100_bases
CTCCTCTATAAGAGAGGCCTATCCTAGGGTAATTGACTCAAATCACCAGGGCTCTTATGAGATGTCTAAGAGCCCTATTA
TGCCAGTAGCCCATTAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MLKRNAFILLAACSLVAMPLFAEDMSSGSQMNNMGMQSSNQQSTQLQDEMKQMQEALKQMQQMHDKLMNAKTTEEKKSLM
QTQMPMMEEGMHTMQKGMKMMQSMHDDTAKQPEMMDQRMKMMQMMTQMMQMMMDRQMMGCPMMKNQ

Sequences:

>Translated_146_residues
MLKRNAFILLAACSLVAMPLFAEDMSSGSQMNNMGMQSSNQQSTQLQDEMKQMQEALKQMQQMHDKLMNAKTTEEKKSLM
QTQMPMMEEGMHTMQKGMKMMQSMHDDTAKQPEMMDQRMKMMQMMTQMMQMMMDRQMMGCPMMKNQ
>Mature_146_residues
MLKRNAFILLAACSLVAMPLFAEDMSSGSQMNNMGMQSSNQQSTQLQDEMKQMQEALKQMQQMHDKLMNAKTTEEKKSLM
QTQMPMMEEGMHTMQKGMKMMQSMHDDTAKQPEMMDQRMKMMQMMTQMMQMMMDRQMMGCPMMKNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17098; Mature: 17098

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
25.3 %Met     (Translated Protein)
26.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
25.3 %Met     (Mature Protein)
26.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRNAFILLAACSLVAMPLFAEDMSSGSQMNNMGMQSSNQQSTQLQDEMKQMQEALKQM
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
QQMHDKLMNAKTTEEKKSLMQTQMPMMEEGMHTMQKGMKMMQSMHDDTAKQPEMMDQRMK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MMQMMTQMMQMMMDRQMMGCPMMKNQ
HHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLKRNAFILLAACSLVAMPLFAEDMSSGSQMNNMGMQSSNQQSTQLQDEMKQMQEALKQM
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
QQMHDKLMNAKTTEEKKSLMQTQMPMMEEGMHTMQKGMKMMQSMHDDTAKQPEMMDQRMK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MMQMMTQMMQMMMDRQMMGCPMMKNQ
HHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA