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The map label for this gene is 52841217

Identifier: 52841217

GI number: 52841217

Start: 1076121

End: 1078067

Strand: Reverse

Name: 52841217

Synonym: lpg0983

Alternate gene names: NA

Gene position: 1078067-1076121 (Counterclockwise)

Preceding gene: 52841218

Following gene: 52841215

Centisome position: 31.73

GC content: 40.88

Gene sequence:

>1947_bases
ATGAGCAATTACCCCATTAATAACCTATTAAGAGAACCAACAGAAGCCTGGTCAGCAGTTACCTGTTTGTCTCTTGCCTT
GCTGGCATATACCCAACCACATTTGTTTTTACTAACCCAAACCATGGGACTATATGCTGCACTCGCATTATTCGTCCCTG
GAATTTATCGAGCCTGGCAAGCAATTAAAGTAAAGCGATATCACCGAAGATTGTTAGCCATGCCTACCTATGCCCTATCC
ACCACAGAAATACCTTTATCCAAAAACTGGTTATTCTTAGGTAAAGGCTTTCGCTGGCGGCCAAGCCACACCCAAAAACT
GCATCAAATTAAACAAGTCAAAAATGAAAAATTCATGCAACGAAGCTATTGCTACCAGCTTACCAGAAGATTCTGCCAAA
GCCATGAACATACAAAGCTGGCTAAATGGCTAAATATCAATTCAAAACTAAACCCATTTAGACCAGATCCACCTGTTGGT
GGTAGTCCATTCTTGCATGGAGTTGGTGACGAAGATAAACCCGTCTACATCCCCCAAGATGTGCGAGTAGGCCATACCTT
CGTTGTCGGTACAACCAGGGTAGGAAAAACACGTTTGGCCAGTATTCTAATTAACCAAGACATCCGAAATGGGGATGCTG
TTATCGTTGTAGATCCCAAAGGCGATCAAGACCTGGTGAGAGACATGGTGGCAGCATGTAAAGTATCAGGACGAACAGAA
GATTTCAAAATCGTACACTTGGGATTTCCAGAACAATCTGCACAATACAACCCCTTAAAAAAATTCGACCAAATCAGTGA
GGTTGCCACACGCATCACCGATGCAATCTCCGCAGAAGGAGAAGGAAAGCAGTTCGCAGCCTTCGCCTGGAAATATGTAA
ATATAGTCGCTATATGCCTGGAAGAAATGAATCAACCCATTACCTACCAAACAATAGCCTTCTATATCAGCCGATTAGAA
CAACTGTTAATGTCCTATGCTGATAACATTCTTCCTAACCACTACCTAAATTATCATCAAGAGATAGATGACATCATTGA
GGAACATGACAGTAAAATAGGCAAAAATAATAAGACTAAATCCCCCATGGAACGCCACCAGGCAGTCATTCAATATATCA
AAGACCACATCAATAAAACCATCAAAAGCAATAATGCCGAAGCTCTACACGACCAAATCTTAATAGACCTCTACGATGCA
GCCATTATGGATAAACATTATTACGACAAAATCACGGCCAGTGTCGGACCTGTACTATCTGAAATCAATAAAAGTAATGC
CTCAAAAATCCTGTCGTCAAAAGCTCAACCAGGCGATATTGAGCTGATGGATGTAATTAAAAATAAGAAAGTGCTTTATA
TTGGCTTAGATAGCCTAACCAATCCCAATATTGCCCAAGCAGTAGGAAAAGCCTTTTTGTCTGATCTGGTGTCTACAGCT
GGTAAAATCTATAAAGAACCCAACGCACGATATACTTTAAATCTACACTGCGATGAGTTATCAGAGATTATTCAGGATTC
TTTTGTGAAGATTCTTAATAAAGCAGGAGGTGCTGGATTTCAGGTGACCGCTTACGCTCAAACTATTCAAGATATGGAAG
TTGCACTTGGTTCCAGGGCTAAAGCAGAAGTATCTGAGGGAAATTTTAATACCCTGATTATGCTGCGTGTTAAAAATGAA
GAAACAGCCAATTTACTGGTTAAAGTACTGCCTCAAGTTGGCGTTGTCGGACATACGCAAGTTTCGATGGTTAATGACAC
GCCGCATGGAGACGATGGGGTTTATTTTAATACAACAAATGAGGATCGCGTTCAGACATCTAATGCTCCTATGATTGGGG
TAGATGATATTATTTCTTTACCTAAAGGGCAGGCGTTTGTATTAGCAAGTGGTGGGGAGATTTGGAAAATTAGAATTCCC
TTGCCCATGAACTCAAATAATGAATGA

Upstream 100 bases:

>100_bases
ACCAACTTACCGCAGAACAGCTAAATACTGCCTTAAAAGCCCGCTGGTATTTGCTGGCTATTTTTGTATTCATTGATGCT
TTGATGATTGGAAGTCGACT

Downstream 100 bases:

>100_bases
CTAAATTCGGTACATGCTTTAACTCGAAAGATCTATATCGCGCTTAAGTGATTGGAATGTACCTGAAGAAGCAACATCCT
CCATAGAAATTTTCTTATAG

Product: conjugative coupling factor TraD

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 648; Mature: 647

Protein sequence:

>648_residues
MSNYPINNLLREPTEAWSAVTCLSLALLAYTQPHLFLLTQTMGLYAALALFVPGIYRAWQAIKVKRYHRRLLAMPTYALS
TTEIPLSKNWLFLGKGFRWRPSHTQKLHQIKQVKNEKFMQRSYCYQLTRRFCQSHEHTKLAKWLNINSKLNPFRPDPPVG
GSPFLHGVGDEDKPVYIPQDVRVGHTFVVGTTRVGKTRLASILINQDIRNGDAVIVVDPKGDQDLVRDMVAACKVSGRTE
DFKIVHLGFPEQSAQYNPLKKFDQISEVATRITDAISAEGEGKQFAAFAWKYVNIVAICLEEMNQPITYQTIAFYISRLE
QLLMSYADNILPNHYLNYHQEIDDIIEEHDSKIGKNNKTKSPMERHQAVIQYIKDHINKTIKSNNAEALHDQILIDLYDA
AIMDKHYYDKITASVGPVLSEINKSNASKILSSKAQPGDIELMDVIKNKKVLYIGLDSLTNPNIAQAVGKAFLSDLVSTA
GKIYKEPNARYTLNLHCDELSEIIQDSFVKILNKAGGAGFQVTAYAQTIQDMEVALGSRAKAEVSEGNFNTLIMLRVKNE
ETANLLVKVLPQVGVVGHTQVSMVNDTPHGDDGVYFNTTNEDRVQTSNAPMIGVDDIISLPKGQAFVLASGGEIWKIRIP
LPMNSNNE

Sequences:

>Translated_648_residues
MSNYPINNLLREPTEAWSAVTCLSLALLAYTQPHLFLLTQTMGLYAALALFVPGIYRAWQAIKVKRYHRRLLAMPTYALS
TTEIPLSKNWLFLGKGFRWRPSHTQKLHQIKQVKNEKFMQRSYCYQLTRRFCQSHEHTKLAKWLNINSKLNPFRPDPPVG
GSPFLHGVGDEDKPVYIPQDVRVGHTFVVGTTRVGKTRLASILINQDIRNGDAVIVVDPKGDQDLVRDMVAACKVSGRTE
DFKIVHLGFPEQSAQYNPLKKFDQISEVATRITDAISAEGEGKQFAAFAWKYVNIVAICLEEMNQPITYQTIAFYISRLE
QLLMSYADNILPNHYLNYHQEIDDIIEEHDSKIGKNNKTKSPMERHQAVIQYIKDHINKTIKSNNAEALHDQILIDLYDA
AIMDKHYYDKITASVGPVLSEINKSNASKILSSKAQPGDIELMDVIKNKKVLYIGLDSLTNPNIAQAVGKAFLSDLVSTA
GKIYKEPNARYTLNLHCDELSEIIQDSFVKILNKAGGAGFQVTAYAQTIQDMEVALGSRAKAEVSEGNFNTLIMLRVKNE
ETANLLVKVLPQVGVVGHTQVSMVNDTPHGDDGVYFNTTNEDRVQTSNAPMIGVDDIISLPKGQAFVLASGGEIWKIRIP
LPMNSNNE
>Mature_647_residues
SNYPINNLLREPTEAWSAVTCLSLALLAYTQPHLFLLTQTMGLYAALALFVPGIYRAWQAIKVKRYHRRLLAMPTYALST
TEIPLSKNWLFLGKGFRWRPSHTQKLHQIKQVKNEKFMQRSYCYQLTRRFCQSHEHTKLAKWLNINSKLNPFRPDPPVGG
SPFLHGVGDEDKPVYIPQDVRVGHTFVVGTTRVGKTRLASILINQDIRNGDAVIVVDPKGDQDLVRDMVAACKVSGRTED
FKIVHLGFPEQSAQYNPLKKFDQISEVATRITDAISAEGEGKQFAAFAWKYVNIVAICLEEMNQPITYQTIAFYISRLEQ
LLMSYADNILPNHYLNYHQEIDDIIEEHDSKIGKNNKTKSPMERHQAVIQYIKDHINKTIKSNNAEALHDQILIDLYDAA
IMDKHYYDKITASVGPVLSEINKSNASKILSSKAQPGDIELMDVIKNKKVLYIGLDSLTNPNIAQAVGKAFLSDLVSTAG
KIYKEPNARYTLNLHCDELSEIIQDSFVKILNKAGGAGFQVTAYAQTIQDMEVALGSRAKAEVSEGNFNTLIMLRVKNEE
TANLLVKVLPQVGVVGHTQVSMVNDTPHGDDGVYFNTTNEDRVQTSNAPMIGVDDIISLPKGQAFVLASGGEIWKIRIPL
PMNSNNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72702; Mature: 72571

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNYPINNLLREPTEAWSAVTCLSLALLAYTQPHLFLLTQTMGLYAALALFVPGIYRAWQ
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
AIKVKRYHRRLLAMPTYALSTTEIPLSKNWLFLGKGFRWRPSHTQKLHQIKQVKNEKFMQ
HHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCCCEECCCHHHHHHHHHHHHHHHHHH
RSYCYQLTRRFCQSHEHTKLAKWLNINSKLNPFRPDPPVGGSPFLHGVGDEDKPVYIPQD
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
VRVGHTFVVGTTRVGKTRLASILINQDIRNGDAVIVVDPKGDQDLVRDMVAACKVSGRTE
CCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCC
DFKIVHLGFPEQSAQYNPLKKFDQISEVATRITDAISAEGEGKQFAAFAWKYVNIVAICL
CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EEMNQPITYQTIAFYISRLEQLLMSYADNILPNHYLNYHQEIDDIIEEHDSKIGKNNKTK
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
SPMERHQAVIQYIKDHINKTIKSNNAEALHDQILIDLYDAAIMDKHYYDKITASVGPVLS
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EINKSNASKILSSKAQPGDIELMDVIKNKKVLYIGLDSLTNPNIAQAVGKAFLSDLVSTA
HHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
GKIYKEPNARYTLNLHCDELSEIIQDSFVKILNKAGGAGFQVTAYAQTIQDMEVALGSRA
HHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCC
KAEVSEGNFNTLIMLRVKNEETANLLVKVLPQVGVVGHTQVSMVNDTPHGDDGVYFNTTN
CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCC
EDRVQTSNAPMIGVDDIISLPKGQAFVLASGGEIWKIRIPLPMNSNNE
CCCEECCCCCEECHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCC
>Mature Secondary Structure 
SNYPINNLLREPTEAWSAVTCLSLALLAYTQPHLFLLTQTMGLYAALALFVPGIYRAWQ
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
AIKVKRYHRRLLAMPTYALSTTEIPLSKNWLFLGKGFRWRPSHTQKLHQIKQVKNEKFMQ
HHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCCCEECCCHHHHHHHHHHHHHHHHHH
RSYCYQLTRRFCQSHEHTKLAKWLNINSKLNPFRPDPPVGGSPFLHGVGDEDKPVYIPQD
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
VRVGHTFVVGTTRVGKTRLASILINQDIRNGDAVIVVDPKGDQDLVRDMVAACKVSGRTE
CCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCC
DFKIVHLGFPEQSAQYNPLKKFDQISEVATRITDAISAEGEGKQFAAFAWKYVNIVAICL
CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EEMNQPITYQTIAFYISRLEQLLMSYADNILPNHYLNYHQEIDDIIEEHDSKIGKNNKTK
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
SPMERHQAVIQYIKDHINKTIKSNNAEALHDQILIDLYDAAIMDKHYYDKITASVGPVLS
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EINKSNASKILSSKAQPGDIELMDVIKNKKVLYIGLDSLTNPNIAQAVGKAFLSDLVSTA
HHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
GKIYKEPNARYTLNLHCDELSEIIQDSFVKILNKAGGAGFQVTAYAQTIQDMEVALGSRA
HHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCC
KAEVSEGNFNTLIMLRVKNEETANLLVKVLPQVGVVGHTQVSMVNDTPHGDDGVYFNTTN
CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCC
EDRVQTSNAPMIGVDDIISLPKGQAFVLASGGEIWKIRIPLPMNSNNE
CCCEECCCCCEECHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA