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The map label for this gene is soj [H]

Identifier: 52788041

GI number: 52788041

Start: 4212425

End: 4213186

Strand: Reverse

Name: soj [H]

Synonym: BLi04369

Alternate gene names: 52788041

Gene position: 4213186-4212425 (Counterclockwise)

Preceding gene: 52788042

Following gene: 52788040

Centisome position: 99.78

GC content: 46.59

Gene sequence:

>762_bases
GTGGGGAAAATTATTGCGATCACAAACCAAAAAGGTGGCGTTGGTAAAACGACAACCTCTGTTAACCTGGGAGCTTGCTT
AGCTTACATCGGGAAAAGGGTTTTGTTAGTCGACATAGACCCGCAAGGAAACGCAACAAGCGGTATCGGCGTTGAAAAGG
CTGATGTTGATCAATGTGTGTACGATATATTAGTAGATGATGCAGATGTGAAAGATGTCATCAAAACAACATCCGTAGAA
AACTTGGATGTCATTCCTGCAACGATCCAGCTTGCGGGGGCGGAAATTGAACTTGTTCCGACCATCTCCCGAGAAGTCCG
GCTGAAAAGGGCTTTGGAATCGGTCAAACAAAACTATGATTTCATGATTATTGACTGCCCGCCGTCATTAGGGCTGCTTA
CAATCAATGCGCTTACGGCTTCCGATTCCGTCGTGATTCCGGTCCAGTGCGAGTATTATGCGCTGGAAGGGCTGAGCCAG
CTGCTCAACTCTGTCCGGCTCGTGCAAAAACATTTAAATACGGATCTGATGATCGACGGCGTATTGCTGACAATGCTTGA
TGCAAGAACGAATTTAGGCATACAGGTCATCGAAGAAGTGAAAAAGTACTTCCGCGATAAAGTATACAAAACGGTTATCC
CCCGGAATGTCCGGCTCAGTGAAGCGCCGAGTCATGGAAAGCCGATCATTTTATATGATCCCCGTTCCAGAGGAGCGGAA
GTCTATTTAGAATTAGCAAAGGAAGTGGCTGCGAATGCCTAA

Upstream 100 bases:

>100_bases
TTTCAAAAAACAAAAACTCAAAAAAAGCAAACAGCCGATTCTTTTTTTGTTAAAATAGAGAAATGAGAGAAACTTGTTCA
ATGTGAAAGTAGGTGACATT

Downstream 100 bases:

>100_bases
AGGTCTCGGAAAAGGGATTAATGCATTGTTTTCAAATGTTGATTTATCCGAAGAAACGGTTGAGGAAATCAAGCTGCAAG
ACTTGCGGCCCAACCCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MGKIIAITNQKGGVGKTTTSVNLGACLAYIGKRVLLVDIDPQGNATSGIGVEKADVDQCVYDILVDDADVKDVIKTTSVE
NLDVIPATIQLAGAEIELVPTISREVRLKRALESVKQNYDFMIIDCPPSLGLLTINALTASDSVVIPVQCEYYALEGLSQ
LLNSVRLVQKHLNTDLMIDGVLLTMLDARTNLGIQVIEEVKKYFRDKVYKTVIPRNVRLSEAPSHGKPIILYDPRSRGAE
VYLELAKEVAANA

Sequences:

>Translated_253_residues
MGKIIAITNQKGGVGKTTTSVNLGACLAYIGKRVLLVDIDPQGNATSGIGVEKADVDQCVYDILVDDADVKDVIKTTSVE
NLDVIPATIQLAGAEIELVPTISREVRLKRALESVKQNYDFMIIDCPPSLGLLTINALTASDSVVIPVQCEYYALEGLSQ
LLNSVRLVQKHLNTDLMIDGVLLTMLDARTNLGIQVIEEVKKYFRDKVYKTVIPRNVRLSEAPSHGKPIILYDPRSRGAE
VYLELAKEVAANA
>Mature_252_residues
GKIIAITNQKGGVGKTTTSVNLGACLAYIGKRVLLVDIDPQGNATSGIGVEKADVDQCVYDILVDDADVKDVIKTTSVEN
LDVIPATIQLAGAEIELVPTISREVRLKRALESVKQNYDFMIIDCPPSLGLLTINALTASDSVVIPVQCEYYALEGLSQL
LNSVRLVQKHLNTDLMIDGVLLTMLDARTNLGIQVIEEVKKYFRDKVYKTVIPRNVRLSEAPSHGKPIILYDPRSRGAEV
YLELAKEVAANA

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

Organism=Escherichia coli, GI1787423, Length=257, Percent_Identity=25.2918287937743, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27550; Mature: 27419

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKIIAITNQKGGVGKTTTSVNLGACLAYIGKRVLLVDIDPQGNATSGIGVEKADVDQCV
CCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
YDILVDDADVKDVIKTTSVENLDVIPATIQLAGAEIELVPTISREVRLKRALESVKQNYD
HHHHCCCCCHHHHHHHCCCCCCEEEEEEEEEECCEEEEEECCHHHHHHHHHHHHHHCCCC
FMIIDCPPSLGLLTINALTASDSVVIPVQCEYYALEGLSQLLNSVRLVQKHLNTDLMIDG
EEEEECCCCCCEEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH
VLLTMLDARTNLGIQVIEEVKKYFRDKVYKTVIPRNVRLSEAPSHGKPIILYDPRSRGAE
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEECCCCCCHH
VYLELAKEVAANA
HHHHHHHHHHCCC
>Mature Secondary Structure 
GKIIAITNQKGGVGKTTTSVNLGACLAYIGKRVLLVDIDPQGNATSGIGVEKADVDQCV
CEEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
YDILVDDADVKDVIKTTSVENLDVIPATIQLAGAEIELVPTISREVRLKRALESVKQNYD
HHHHCCCCCHHHHHHHCCCCCCEEEEEEEEEECCEEEEEECCHHHHHHHHHHHHHHCCCC
FMIIDCPPSLGLLTINALTASDSVVIPVQCEYYALEGLSQLLNSVRLVQKHLNTDLMIDG
EEEEECCCCCCEEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH
VLLTMLDARTNLGIQVIEEVKKYFRDKVYKTVIPRNVRLSEAPSHGKPIILYDPRSRGAE
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEECCCCCCHH
VYLELAKEVAANA
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]