Click here to switch to the map view.

The map label for this gene is yyaD [H]

Identifier: 52788038

GI number: 52788038

Start: 4209613

End: 4210626

Strand: Reverse

Name: yyaD [H]

Synonym: BLi04366

Alternate gene names: 52788038

Gene position: 4210626-4209613 (Counterclockwise)

Preceding gene: 52788040

Following gene: 52788037

Centisome position: 99.72

GC content: 43.98

Gene sequence:

>1014_bases
GTGTGGAGAGCCGGGATGAAGTGGATGCTTCTTATTTTAGGAAGCTTAATAGGTGCGGGATATGCATCCGGCCAGGAAAT
ATGGCAGTTTTTTGGTGATGAAAGCGGACTGGCTATCCTGTTGTTTACGATCATGTTCAGCCTGTCAACCTATATTGTGA
TGAAGATCAGCTATGAACAAAAATCAGAGCATTTTCTGCCTGTGCTCGAAACATTAATCGGTCCGATGCTGGCTAAAGTA
TACGATGTGCTGATCATCCTGTATTTGTTTACGACGACGATTGTGATGATTGCAGGAGGCGGGGTAACGCTGCAAATCTT
TCATATCCCGTTTTGGACTGGCGTCATCTTGTTTTGTTTATGCACAGGGTTGTTGTTTTTGTGGGGGCTCAATGGCATAT
TGTCCGTTAATAGCTACTTAATCCCGATTTTGGTGGCGGGGCTGCTGTATGCGCTGATTTCTTTTCAAACAGCTCATCAT
CAGCCGTGGCTGCTCAACTTGACTCATCAATACAACTGGCCTGCCGGCATCGCATTCACTTCCCTGAACATATTATCTGT
TGTCGCTGTATTATCTGCGGTCGGCAAAGAGATGAAGGGGGTCGGAGAAGCAAAGATTGCCAGCATATTAAGCGGCCTGG
TGTTTGGGGCTATTTCATACATGTACAATGAGACCCTTGTAGAGCTTGCCGGTGAACTGGCCCATTATGAAATTCCTTTA
TTCGCGGTTTTGGAGGGCGCGCCTTTTCCGATTTTTATTTTTATGACGGCTGTACTTTGCGTCGCAATCTATACGACGAC
GATCTCGAGCATTCTCGGTCTGTCCAGCCGTTTTCTGTCCTTTGTGAACTGGCCGAGATGGGTGATCGTCATCCTGCTTC
TCTCGATCATGGCTCCTTTTACGTCAATCGGATTTTCAAATTTAATCGCTTTTTTATATCCAATTTACGGATTATTGAAT
TTATATTTATTGGTAAATATTTTACTATATCCGATTTTGAGTAAATGGAAATAA

Upstream 100 bases:

>100_bases
AAGTCGAAAAGGGTTTCATGAATTTTTATAGAGGACCGGCAATATAGTGTCATGAGCGGAGAAACAAGCTTAAAAACTAT
ATTGTTGGGGTGAGCAAATC

Downstream 100 bases:

>100_bases
ATACAGTTAAGATTGTGAAGAATTGCCCTTTCACCGTGGTTTTTTGTACAATAAGGTCACAACAAGGAAGCAAAGAGGTG
AACGATGTTGGCCGATAAAG

Product: YyaD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MWRAGMKWMLLILGSLIGAGYASGQEIWQFFGDESGLAILLFTIMFSLSTYIVMKISYEQKSEHFLPVLETLIGPMLAKV
YDVLIILYLFTTTIVMIAGGGVTLQIFHIPFWTGVILFCLCTGLLFLWGLNGILSVNSYLIPILVAGLLYALISFQTAHH
QPWLLNLTHQYNWPAGIAFTSLNILSVVAVLSAVGKEMKGVGEAKIASILSGLVFGAISYMYNETLVELAGELAHYEIPL
FAVLEGAPFPIFIFMTAVLCVAIYTTTISSILGLSSRFLSFVNWPRWVIVILLLSIMAPFTSIGFSNLIAFLYPIYGLLN
LYLLVNILLYPILSKWK

Sequences:

>Translated_337_residues
MWRAGMKWMLLILGSLIGAGYASGQEIWQFFGDESGLAILLFTIMFSLSTYIVMKISYEQKSEHFLPVLETLIGPMLAKV
YDVLIILYLFTTTIVMIAGGGVTLQIFHIPFWTGVILFCLCTGLLFLWGLNGILSVNSYLIPILVAGLLYALISFQTAHH
QPWLLNLTHQYNWPAGIAFTSLNILSVVAVLSAVGKEMKGVGEAKIASILSGLVFGAISYMYNETLVELAGELAHYEIPL
FAVLEGAPFPIFIFMTAVLCVAIYTTTISSILGLSSRFLSFVNWPRWVIVILLLSIMAPFTSIGFSNLIAFLYPIYGLLN
LYLLVNILLYPILSKWK
>Mature_337_residues
MWRAGMKWMLLILGSLIGAGYASGQEIWQFFGDESGLAILLFTIMFSLSTYIVMKISYEQKSEHFLPVLETLIGPMLAKV
YDVLIILYLFTTTIVMIAGGGVTLQIFHIPFWTGVILFCLCTGLLFLWGLNGILSVNSYLIPILVAGLLYALISFQTAHH
QPWLLNLTHQYNWPAGIAFTSLNILSVVAVLSAVGKEMKGVGEAKIASILSGLVFGAISYMYNETLVELAGELAHYEIPL
FAVLEGAPFPIFIFMTAVLCVAIYTTTISSILGLSSRFLSFVNWPRWVIVILLLSIMAPFTSIGFSNLIAFLYPIYGLLN
LYLLVNILLYPILSKWK

Specific function: Unknown

COG id: COG3949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37393; Mature: 37393

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRAGMKWMLLILGSLIGAGYASGQEIWQFFGDESGLAILLFTIMFSLSTYIVMKISYEQ
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEHHH
KSEHFLPVLETLIGPMLAKVYDVLIILYLFTTTIVMIAGGGVTLQIFHIPFWTGVILFCL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHH
CTGLLFLWGLNGILSVNSYLIPILVAGLLYALISFQTAHHQPWLLNLTHQYNWPAGIAFT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHH
SLNILSVVAVLSAVGKEMKGVGEAKIASILSGLVFGAISYMYNETLVELAGELAHYEIPL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FAVLEGAPFPIFIFMTAVLCVAIYTTTISSILGLSSRFLSFVNWPRWVIVILLLSIMAPF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
TSIGFSNLIAFLYPIYGLLNLYLLVNILLYPILSKWK
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWRAGMKWMLLILGSLIGAGYASGQEIWQFFGDESGLAILLFTIMFSLSTYIVMKISYEQ
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEHHH
KSEHFLPVLETLIGPMLAKVYDVLIILYLFTTTIVMIAGGGVTLQIFHIPFWTGVILFCL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHH
CTGLLFLWGLNGILSVNSYLIPILVAGLLYALISFQTAHHQPWLLNLTHQYNWPAGIAFT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHH
SLNILSVVAVLSAVGKEMKGVGEAKIASILSGLVFGAISYMYNETLVELAGELAHYEIPL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FAVLEGAPFPIFIFMTAVLCVAIYTTTISSILGLSSRFLSFVNWPRWVIVILLLSIMAPF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
TSIGFSNLIAFLYPIYGLLNLYLLVNILLYPILSKWK
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377 [H]