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The map label for this gene is ybaR [H]

Identifier: 52788031

GI number: 52788031

Start: 4203728

End: 4205194

Strand: Reverse

Name: ybaR [H]

Synonym: BLi04359

Alternate gene names: 52788031

Gene position: 4205194-4203728 (Counterclockwise)

Preceding gene: 52788033

Following gene: 52788030

Centisome position: 99.59

GC content: 44.44

Gene sequence:

>1467_bases
TTGAATGTTAAACAATTAAATAGCGAATGGTTTTCTAATGTACGGGGGGATATCCTTTCGGGTATCGTCGTAGCGCTTGC
TCTCATTCCTGAAGCCATAGCGTTCTCCATCATTGCGGGTGTAGACCCGATGGTAGGTTTGTACGCATCTTTTTGTATCG
CCGTTGTCATTTCCTTTACGGGCGGCCGTCCGGCGATGATATCAGCCGCGACCGGGGCGATGGCTCTTTTGATGGGAACT
TTGGTCAGAGATCACGGGCTTGATTATTTATTTGCTGCTACGATTTTAACGGGAATCATCCAATTAATATTTGGGGTGCT
GAAGATTGCGCGCTTTATGAAATTTATTCCGCGGTCGGTTATGGTAGGTTTCGTAAATGCGCTGGCCATTTTAATCTTTA
TGGCGCAGGTTCCTCATTTTGTTGGAGTTTCGAATATGACGTATGTTGTGGCCGGTATTACGTTGTTGATTATCTATGTT
CTTCCCCGCTTTACAAAAGCCGTTCCATCTGCACTTGTTGCCATTATTGCGATGACTGTATTTGCCATTTTCGGTCATTT
TGATCTGCGCACTGTCGGTGATTTGGGAGAAATGAAGCAATCATTGCCTGCCTTTATGATTCCCAATATTCCTTTCAATT
TTGAGACATTGGCCATTATTTTTCCAACAGCCTTTGCGCTTTCCATCGTTGGCTTGCTTGAGTCATTATTAACCTCTTCT
ATTGTTGATGATATGACGGATACGGAAAGCGACAAAAACAGGGAAAGCCGCGGACAGGGCATCGCCAACATTGTCGCCGG
TTTTTTCGGAGGCATGGCGGGATGCGCGATGATCGGCCAGTCTGTGATCAATGTAAAATCAGGAGGAAGAGGCCGCTTGT
CCACCTTTGTTGCCGGTGTCTTCTTAATGTTTTTAATCATGGTGCTGGGCGACTGGGTCGTACAAATTCCGATGGCAGCT
TTGGCTGGCGTGATGATTATGGTATCGATCGGGACGTTTGACTGGTCTTCGTTTAGCATGTTAAGAAAGGTGCCGCTGAC
GGATTCCATTGTCATGATTGTAACCGTCGTTACCGTTGTGGCCACCCACGATTTATCAAAAGGGGTTTTCGCCGGCGTGA
TTTTAAGCGCAATCTTCTTCGTAGCGAAAATCTCCAAACTAAAAATTGAAGAAAAGTCAGAAGAAAACGCGGTCAAGTAC
ATCATCAAAGGACAAGTTTTCTTTGCATCGGTTCAAGATTTCGTAAACTCCTTTAAAACGGGAGAGCAAACGAAAAAGGT
CATTCTTGATTTTTCTGAGGCCCATATATGGGATGATTCCGCTGTGGCGGCTATCGATAAAGTCGTTTTGAAAATGAAAG
AGCAAGGAATAGATGTTGACTTGATTGGATTAAATGAATCCAGCTGGAAGCTGGTCGAAAAATTAGCAACCTATGATCAA
CCTCATCGTTCAGTGTCAAATCACTAA

Upstream 100 bases:

>100_bases
ATAGACATTTTGATACAGGTTTGCTAAAGTGAAACATGTTAAAAACAGATGGCTTCTATGAGAGTTAGAAGCAAATGATC
ACGAACGAGGTGTTGAATCT

Downstream 100 bases:

>100_bases
GAAACGGGTGATGAAGGGTGTATAGACATATACTGCTGGCTGCTGACGGTTCCAAGCATTCTGAAAGAGCTGCCGATCAT
GCGATTCATCTGGCTTCCAT

Product: YbaR

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MNVKQLNSEWFSNVRGDILSGIVVALALIPEAIAFSIIAGVDPMVGLYASFCIAVVISFTGGRPAMISAATGAMALLMGT
LVRDHGLDYLFAATILTGIIQLIFGVLKIARFMKFIPRSVMVGFVNALAILIFMAQVPHFVGVSNMTYVVAGITLLIIYV
LPRFTKAVPSALVAIIAMTVFAIFGHFDLRTVGDLGEMKQSLPAFMIPNIPFNFETLAIIFPTAFALSIVGLLESLLTSS
IVDDMTDTESDKNRESRGQGIANIVAGFFGGMAGCAMIGQSVINVKSGGRGRLSTFVAGVFLMFLIMVLGDWVVQIPMAA
LAGVMIMVSIGTFDWSSFSMLRKVPLTDSIVMIVTVVTVVATHDLSKGVFAGVILSAIFFVAKISKLKIEEKSEENAVKY
IIKGQVFFASVQDFVNSFKTGEQTKKVILDFSEAHIWDDSAVAAIDKVVLKMKEQGIDVDLIGLNESSWKLVEKLATYDQ
PHRSVSNH

Sequences:

>Translated_488_residues
MNVKQLNSEWFSNVRGDILSGIVVALALIPEAIAFSIIAGVDPMVGLYASFCIAVVISFTGGRPAMISAATGAMALLMGT
LVRDHGLDYLFAATILTGIIQLIFGVLKIARFMKFIPRSVMVGFVNALAILIFMAQVPHFVGVSNMTYVVAGITLLIIYV
LPRFTKAVPSALVAIIAMTVFAIFGHFDLRTVGDLGEMKQSLPAFMIPNIPFNFETLAIIFPTAFALSIVGLLESLLTSS
IVDDMTDTESDKNRESRGQGIANIVAGFFGGMAGCAMIGQSVINVKSGGRGRLSTFVAGVFLMFLIMVLGDWVVQIPMAA
LAGVMIMVSIGTFDWSSFSMLRKVPLTDSIVMIVTVVTVVATHDLSKGVFAGVILSAIFFVAKISKLKIEEKSEENAVKY
IIKGQVFFASVQDFVNSFKTGEQTKKVILDFSEAHIWDDSAVAAIDKVVLKMKEQGIDVDLIGLNESSWKLVEKLATYDQ
PHRSVSNH
>Mature_488_residues
MNVKQLNSEWFSNVRGDILSGIVVALALIPEAIAFSIIAGVDPMVGLYASFCIAVVISFTGGRPAMISAATGAMALLMGT
LVRDHGLDYLFAATILTGIIQLIFGVLKIARFMKFIPRSVMVGFVNALAILIFMAQVPHFVGVSNMTYVVAGITLLIIYV
LPRFTKAVPSALVAIIAMTVFAIFGHFDLRTVGDLGEMKQSLPAFMIPNIPFNFETLAIIFPTAFALSIVGLLESLLTSS
IVDDMTDTESDKNRESRGQGIANIVAGFFGGMAGCAMIGQSVINVKSGGRGRLSTFVAGVFLMFLIMVLGDWVVQIPMAA
LAGVMIMVSIGTFDWSSFSMLRKVPLTDSIVMIVTVVTVVATHDLSKGVFAGVILSAIFFVAKISKLKIEEKSEENAVKY
IIKGQVFFASVQDFVNSFKTGEQTKKVILDFSEAHIWDDSAVAAIDKVVLKMKEQGIDVDLIGLNESSWKLVEKLATYDQ
PHRSVSNH

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI45827800, Length=394, Percent_Identity=23.3502538071066, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI39752683, Length=394, Percent_Identity=23.3502538071066, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI4557535, Length=386, Percent_Identity=24.8704663212435, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI45827802, Length=435, Percent_Identity=22.7586206896552, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI16418457, Length=387, Percent_Identity=25.3229974160207, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI301601599, Length=387, Percent_Identity=25.3229974160207, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI94721259, Length=501, Percent_Identity=20.3592814371257, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI94721255, Length=501, Percent_Identity=20.3592814371257, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI94721253, Length=501, Percent_Identity=20.3592814371257, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI94721257, Length=501, Percent_Identity=20.3592814371257, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI4505697, Length=394, Percent_Identity=21.5736040609137, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI262206105, Length=525, Percent_Identity=21.3333333333333, Blast_Score=66, Evalue=9e-11,
Organism=Homo sapiens, GI262206075, Length=525, Percent_Identity=21.3333333333333, Blast_Score=66, Evalue=9e-11,
Organism=Homo sapiens, GI262206069, Length=525, Percent_Identity=21.3333333333333, Blast_Score=66, Evalue=9e-11,
Organism=Homo sapiens, GI262206063, Length=525, Percent_Identity=21.3333333333333, Blast_Score=66, Evalue=9e-11,
Organism=Escherichia coli, GI87081859, Length=517, Percent_Identity=24.9516441005803, Blast_Score=156, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI86565215, Length=496, Percent_Identity=20.3629032258065, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17566848, Length=543, Percent_Identity=21.1786372007366, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI193203292, Length=449, Percent_Identity=20.4899777282851, Blast_Score=78, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6325260, Length=448, Percent_Identity=21.6517857142857, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24651449, Length=538, Percent_Identity=24.1635687732342, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24649801, Length=507, Percent_Identity=22.4852071005917, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI21358229, Length=514, Percent_Identity=24.3190661478599, Blast_Score=83, Evalue=6e-16,
Organism=Drosophila melanogaster, GI85815873, Length=513, Percent_Identity=23.7816764132554, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI21358633, Length=517, Percent_Identity=20.3094777562863, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24647160, Length=128, Percent_Identity=28.90625, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355087, Length=128, Percent_Identity=28.90625, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI19922482, Length=144, Percent_Identity=31.25, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 52680; Mature: 52680

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS50801 STAS ; PS01130 SLC26A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKQLNSEWFSNVRGDILSGIVVALALIPEAIAFSIIAGVDPMVGLYASFCIAVVISFT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
GGRPAMISAATGAMALLMGTLVRDHGLDYLFAATILTGIIQLIFGVLKIARFMKFIPRSV
CCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVGFVNALAILIFMAQVPHFVGVSNMTYVVAGITLLIIYVLPRFTKAVPSALVAIIAMTV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAIFGHFDLRTVGDLGEMKQSLPAFMIPNIPFNFETLAIIFPTAFALSIVGLLESLLTSS
HHHHCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IVDDMTDTESDKNRESRGQGIANIVAGFFGGMAGCAMIGQSVINVKSGGRGRLSTFVAGV
HHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
FLMFLIMVLGDWVVQIPMAALAGVMIMVSIGTFDWSSFSMLRKVPLTDSIVMIVTVVTVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHH
ATHDLSKGVFAGVILSAIFFVAKISKLKIEEKSEENAVKYIIKGQVFFASVQDFVNSFKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHC
GEQTKKVILDFSEAHIWDDSAVAAIDKVVLKMKEQGIDVDLIGLNESSWKLVEKLATYDQ
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCC
PHRSVSNH
CCCCCCCC
>Mature Secondary Structure
MNVKQLNSEWFSNVRGDILSGIVVALALIPEAIAFSIIAGVDPMVGLYASFCIAVVISFT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
GGRPAMISAATGAMALLMGTLVRDHGLDYLFAATILTGIIQLIFGVLKIARFMKFIPRSV
CCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVGFVNALAILIFMAQVPHFVGVSNMTYVVAGITLLIIYVLPRFTKAVPSALVAIIAMTV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAIFGHFDLRTVGDLGEMKQSLPAFMIPNIPFNFETLAIIFPTAFALSIVGLLESLLTSS
HHHHCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IVDDMTDTESDKNRESRGQGIANIVAGFFGGMAGCAMIGQSVINVKSGGRGRLSTFVAGV
HHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
FLMFLIMVLGDWVVQIPMAALAGVMIMVSIGTFDWSSFSMLRKVPLTDSIVMIVTVVTVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHH
ATHDLSKGVFAGVILSAIFFVAKISKLKIEEKSEENAVKYIIKGQVFFASVQDFVNSFKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHC
GEQTKKVILDFSEAHIWDDSAVAAIDKVVLKMKEQGIDVDLIGLNESSWKLVEKLATYDQ
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCC
PHRSVSNH
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]