Click here to switch to the map view.

The map label for this gene is 52788002

Identifier: 52788002

GI number: 52788002

Start: 4176590

End: 4177129

Strand: Reverse

Name: 52788002

Synonym: BLi04326

Alternate gene names: NA

Gene position: 4177129-4176590 (Counterclockwise)

Preceding gene: 52788003

Following gene: 52788001

Centisome position: 98.92

GC content: 39.07

Gene sequence:

>540_bases
ATGACAAGGATAAAAAGACCTGGAAGAACAGTTTTAAGGAAAGAAGAGTGTTTCAGCATGAGTAAGGAATTAGAGGAATT
TCCGAAAATAAAACCCTTATATGCGGTGTTATTAACGATCATAACGTCCGGCATATACATCCCGTATTGGTTTCTCTCAA
GAAGAAAGAATTTAGAACGATGCCAAATTAAGCTCCCGTATGTCGCCATTAAAGTGACGCTGCTGTTAAGCGTCTTTTCA
ATTTTGGAGCCTTTTTGGACTTTTTATTCAATCACATTTCAAAGTGAAGACCTGCTGCCATACAGCAACAGCATTTTGCT
TCTCCCGCTGCGCCCCGGACACAGCTTTCTCCCGCAGCTCTCATTCCTCCTTTTTTGGACGGTAAATTTATATAGTGCAT
TTAAGGTTAGAAAAGCGTTTATTGGGCTGTCGGAAAAGCAGGTTAACGGGTTTTGGACTTTCATTCTTAACGTTTCATAT
TTGCAGTATATTACAAATCAGCATTCTTTAGTTGTTCAGGAAAAAAGAGAAGCAGTATAA

Upstream 100 bases:

>100_bases
AATCCATATACCTAAGAAAATCCCAATTTAACACTTCAATGGATTTTGATTTATTGGATTCAATATAGTACATTTTGATA
TGGAAAGTGGAAAAGTATAG

Downstream 100 bases:

>100_bases
AAACAAGATTAAAGCATCAGCGAGATTGGCTGGTGTTTTTTATTTGGAGAGAACAGAGTTATCCAGAGGAATATAAAAGC
TTGTGGATAACCGCGTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTRIKRPGRTVLRKEECFSMSKELEEFPKIKPLYAVLLTIITSGIYIPYWFLSRRKNLERCQIKLPYVAIKVTLLLSVFS
ILEPFWTFYSITFQSEDLLPYSNSILLLPLRPGHSFLPQLSFLLFWTVNLYSAFKVRKAFIGLSEKQVNGFWTFILNVSY
LQYITNQHSLVVQEKREAV

Sequences:

>Translated_179_residues
MTRIKRPGRTVLRKEECFSMSKELEEFPKIKPLYAVLLTIITSGIYIPYWFLSRRKNLERCQIKLPYVAIKVTLLLSVFS
ILEPFWTFYSITFQSEDLLPYSNSILLLPLRPGHSFLPQLSFLLFWTVNLYSAFKVRKAFIGLSEKQVNGFWTFILNVSY
LQYITNQHSLVVQEKREAV
>Mature_178_residues
TRIKRPGRTVLRKEECFSMSKELEEFPKIKPLYAVLLTIITSGIYIPYWFLSRRKNLERCQIKLPYVAIKVTLLLSVFSI
LEPFWTFYSITFQSEDLLPYSNSILLLPLRPGHSFLPQLSFLLFWTVNLYSAFKVRKAFIGLSEKQVNGFWTFILNVSYL
QYITNQHSLVVQEKREAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21097; Mature: 20966

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRIKRPGRTVLRKEECFSMSKELEEFPKIKPLYAVLLTIITSGIYIPYWFLSRRKNLER
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCH
CQIKLPYVAIKVTLLLSVFSILEPFWTFYSITFQSEDLLPYSNSILLLPLRPGHSFLPQL
HEEECCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEECCCCHHHHHH
SFLLFWTVNLYSAFKVRKAFIGLSEKQVNGFWTFILNVSYLQYITNQHSLVVQEKREAV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCC
>Mature Secondary Structure 
TRIKRPGRTVLRKEECFSMSKELEEFPKIKPLYAVLLTIITSGIYIPYWFLSRRKNLER
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCH
CQIKLPYVAIKVTLLLSVFSILEPFWTFYSITFQSEDLLPYSNSILLLPLRPGHSFLPQL
HEEECCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEECCCCHHHHHH
SFLLFWTVNLYSAFKVRKAFIGLSEKQVNGFWTFILNVSYLQYITNQHSLVVQEKREAV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA