Click here to switch to the map view.

The map label for this gene is yxdK [H]

Identifier: 52787947

GI number: 52787947

Start: 4111598

End: 4112605

Strand: Reverse

Name: yxdK [H]

Synonym: BLi04270

Alternate gene names: 52787947

Gene position: 4112605-4111598 (Counterclockwise)

Preceding gene: 52787948

Following gene: 52787946

Centisome position: 97.39

GC content: 47.02

Gene sequence:

>1008_bases
ATGAAGCTTTTTTTCAAAGAGCACTATTTGTTGATTGCCGTGCAGGCGCTGCAGTTTATCACAATGCTGTCAGTGTACTG
GCTTGATGGGTATCAGCACATCAGACCGGCTTTTTATGCCGTTTTTCTCGGCTTTTTCTTTCTTGGCTTCTATCTTTTCT
ACCATTACTATACGCGCCGGAAGTTCTACAAACGGATGACGAGCGGGCTGGAGTCATTGGATGACACCTTCAGGCAATCG
AATCAGCCCCAATCCCCTTTGTCGGAAGCGCTTGAACAGCTGCTGAAAAGCCAGTACAAGCAATACCGCCAAGAATTAAA
GAAGCTGGAGCTTGGCCAAAAAGAGCATTTGACTTTCATGGATCAATGGGTGCACCAAATGAAGACGCCGTTGTCGGTCA
TCGAACTGACGGCTCAAAATTTGGATGAACCGGAATCATCCAGCATCCGCGAGGAGACCGAGCGGATGAAAACGGGCCTC
AATACGATTCTCTATATGGCCAGACTGCGGACGATCGAACAGGATTTCCGTATAAAACCGGTCGCATTGGCGGATATCGT
TCACGAGGTCAATCGCGAAAATAAGCGCTTTTACATTCGCAGTCAAGTTTATCCTAAGTTCAAAGAAATCAAAAAAGGCA
TCACCGTCGAAACAGATGAAAAGTGGCTGTTTTTCATCATTTCCCAGTTTGTCAACAATGCGGTCAAATATTCGGCGGGG
AAAAGCAATACAGTCATTATTTCTGTATACGAAAATGATTCGGAAGCGGTATTGGAAGTGGCAGATTTCGGCGCCGGCAT
CCCGGATACAGATCAAAAGCGGGTTTTCGACCCGTTTTTCACAGGAGAAAACGGACGCCGTTTCAGAGAATCGACCGGAA
TGGGTCTTTACTTGGCAAAATCGGCGGCTGACCAGCTCGGCCACCGGATCGAACTTGATTCACAAGAAGGGAAAGGCACG
ACAATTCGGCTGATTTTCACGGCTACGCAAAACCTTACATCGATGTAA

Upstream 100 bases:

>100_bases
TCAGAAAAAAATTTCAGGAGCTCGGTATTGAAGATGCAGTGGAAACAGTGCGGGGCGCGGGCTATCGCTTGAATGTATCC
TGGGTGAAGGCGGGAGAGGA

Downstream 100 bases:

>100_bases
TGAAAGTGAAAGAAGAATCGATAGTTCATCAACAAGAGATTTAGGTAAACTGGTCACAGATCGAAAGTTAAAGGTGAAAG
GAGATCTTGTGATGCTTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MKLFFKEHYLLIAVQALQFITMLSVYWLDGYQHIRPAFYAVFLGFFFLGFYLFYHYYTRRKFYKRMTSGLESLDDTFRQS
NQPQSPLSEALEQLLKSQYKQYRQELKKLELGQKEHLTFMDQWVHQMKTPLSVIELTAQNLDEPESSSIREETERMKTGL
NTILYMARLRTIEQDFRIKPVALADIVHEVNRENKRFYIRSQVYPKFKEIKKGITVETDEKWLFFIISQFVNNAVKYSAG
KSNTVIISVYENDSEAVLEVADFGAGIPDTDQKRVFDPFFTGENGRRFRESTGMGLYLAKSAADQLGHRIELDSQEGKGT
TIRLIFTATQNLTSM

Sequences:

>Translated_335_residues
MKLFFKEHYLLIAVQALQFITMLSVYWLDGYQHIRPAFYAVFLGFFFLGFYLFYHYYTRRKFYKRMTSGLESLDDTFRQS
NQPQSPLSEALEQLLKSQYKQYRQELKKLELGQKEHLTFMDQWVHQMKTPLSVIELTAQNLDEPESSSIREETERMKTGL
NTILYMARLRTIEQDFRIKPVALADIVHEVNRENKRFYIRSQVYPKFKEIKKGITVETDEKWLFFIISQFVNNAVKYSAG
KSNTVIISVYENDSEAVLEVADFGAGIPDTDQKRVFDPFFTGENGRRFRESTGMGLYLAKSAADQLGHRIELDSQEGKGT
TIRLIFTATQNLTSM
>Mature_335_residues
MKLFFKEHYLLIAVQALQFITMLSVYWLDGYQHIRPAFYAVFLGFFFLGFYLFYHYYTRRKFYKRMTSGLESLDDTFRQS
NQPQSPLSEALEQLLKSQYKQYRQELKKLELGQKEHLTFMDQWVHQMKTPLSVIELTAQNLDEPESSSIREETERMKTGL
NTILYMARLRTIEQDFRIKPVALADIVHEVNRENKRFYIRSQVYPKFKEIKKGITVETDEKWLFFIISQFVNNAVKYSAG
KSNTVIISVYENDSEAVLEVADFGAGIPDTDQKRVFDPFFTGENGRRFRESTGMGLYLAKSAADQLGHRIELDSQEGKGT
TIRLIFTATQNLTSM

Specific function: Probable member of the two-component regulatory system yxdK/yxdJ. May activate yxdJ in response to the antibacterial protein LL-37 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI145693157, Length=229, Percent_Identity=23.5807860262009, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 39244; Mature: 39244

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFFKEHYLLIAVQALQFITMLSVYWLDGYQHIRPAFYAVFLGFFFLGFYLFYHYYTRR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFYKRMTSGLESLDDTFRQSNQPQSPLSEALEQLLKSQYKQYRQELKKLELGQKEHLTFM
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
DQWVHQMKTPLSVIELTAQNLDEPESSSIREETERMKTGLNTILYMARLRTIEQDFRIKP
HHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
VALADIVHEVNRENKRFYIRSQVYPKFKEIKKGITVETDEKWLFFIISQFVNNAVKYSAG
HHHHHHHHHHCCCCCEEEEEHHCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHCCCC
KSNTVIISVYENDSEAVLEVADFGAGIPDTDQKRVFDPFFTGENGRRFRESTGMGLYLAK
CCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCHHHHHCCCCEEEHH
SAADQLGHRIELDSQEGKGTTIRLIFTATQNLTSM
HHHHHCCCEEEECCCCCCCCEEEEEEEECCHHCCC
>Mature Secondary Structure
MKLFFKEHYLLIAVQALQFITMLSVYWLDGYQHIRPAFYAVFLGFFFLGFYLFYHYYTRR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFYKRMTSGLESLDDTFRQSNQPQSPLSEALEQLLKSQYKQYRQELKKLELGQKEHLTFM
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
DQWVHQMKTPLSVIELTAQNLDEPESSSIREETERMKTGLNTILYMARLRTIEQDFRIKP
HHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
VALADIVHEVNRENKRFYIRSQVYPKFKEIKKGITVETDEKWLFFIISQFVNNAVKYSAG
HHHHHHHHHHCCCCCEEEEEHHCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHCCCC
KSNTVIISVYENDSEAVLEVADFGAGIPDTDQKRVFDPFFTGENGRRFRESTGMGLYLAK
CCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCHHHHHCCCCEEEHH
SAADQLGHRIELDSQEGKGTTIRLIFTATQNLTSM
HHHHHCCCEEEECCCCCCCCEEEEEEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7952181; 9384377; 8867804 [H]