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The map label for this gene is yoaV [H]

Identifier: 52787918

GI number: 52787918

Start: 4078466

End: 4079404

Strand: Reverse

Name: yoaV [H]

Synonym: BLi04241

Alternate gene names: 52787918

Gene position: 4079404-4078466 (Counterclockwise)

Preceding gene: 52787919

Following gene: 52787917

Centisome position: 96.61

GC content: 44.09

Gene sequence:

>939_bases
ATGCTGACAAACGTTTTAAAGTATCGGGTTCATATTTTATTTATCGTGTTATGTTTGATCGGCGGGACGACATGGGCTTT
TCAAAAAGCCGGGCTGAGTGACAGCCTTCCATTTTGGTCCGCCGGCATGCGGTTCATGATCGCAAGCATTTTGATCGCGG
CGTTTCTGTTGGCACGGAGGCAGTTTGTTCTGTCAAAGGAACTGCTAGTGCTGTCGTTTTTGAACGGCATCATGTATTTT
TCCGTTCCATTCGGATCTGTTTATTGGGCCTCTCTTTATTTGCCGAGCGGGTTGGTGTCTATATTAGCGGCAAGCATTTC
AGTCTTTGCCCTGATGATCAACCGCCTCGTCAAAGGGACACCGGCGACGAAACTGCAGAAATGGGGGATATGCCTGGCTT
TGCTCGGCATTACAATCGTGTTTGGCAACCAACTGCTGATCAAAGTCGATGTTATTGAAATTGTCGCAATGATTGTGATT
TTGTGTGCGATGTTTGGCTCGGCTTTTATTCAAATCAAAGTACAGCAGAGAATTCGTTCGCTTCCGATCTTAAGCTTTAA
CTCCCTTTCAATGCTGAGCGGCGGAGCGGTATTGCTCATCAGCAGCCTCATCTTTGAAAGCGGGACAAGAACGTTTTCCG
GTGTGAGTCTTTATGCGCTGCTTTATTTAGCGGTTGTCGGCTCGATTTTGGGTTTTTGGATCAACATTTATCTGCTTAAA
AAATGGCACATCTCAAAAGCGACTTCCCACTTGTTCATCTCCCCTGTCATTGCGCTCTATATCGGATTTCTGTTTCTGGA
TGAAAAACTGAATGCGAATATTTATTTAGGAACGCTGTTTGTCATATTCGGTGTGATGTTCATCAACTTAAAAAAAGAAG
AGAGGATCGCGAAAATTGACGAAACGAAACAAAAACTTGGCCATCATTTGTCAAAATAA

Upstream 100 bases:

>100_bases
AATAGTTATAATTTCCCTCATAATCCATTTTGATCAGAAAAGATTTTATTTTCTGAAAATAAATGACAGCAAGACAATAA
CTAAATCAGGTGAATGCTAT

Downstream 100 bases:

>100_bases
GCACCTGCCATTTATTTTTGAAGAAGCTGAGCGTTTAGGATTGAAGGTCACGTTCTTTTACAATTCGGCCGAAGATTTCC
CGGGCAATCTTCCGGCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MLTNVLKYRVHILFIVLCLIGGTTWAFQKAGLSDSLPFWSAGMRFMIASILIAAFLLARRQFVLSKELLVLSFLNGIMYF
SVPFGSVYWASLYLPSGLVSILAASISVFALMINRLVKGTPATKLQKWGICLALLGITIVFGNQLLIKVDVIEIVAMIVI
LCAMFGSAFIQIKVQQRIRSLPILSFNSLSMLSGGAVLLISSLIFESGTRTFSGVSLYALLYLAVVGSILGFWINIYLLK
KWHISKATSHLFISPVIALYIGFLFLDEKLNANIYLGTLFVIFGVMFINLKKEERIAKIDETKQKLGHHLSK

Sequences:

>Translated_312_residues
MLTNVLKYRVHILFIVLCLIGGTTWAFQKAGLSDSLPFWSAGMRFMIASILIAAFLLARRQFVLSKELLVLSFLNGIMYF
SVPFGSVYWASLYLPSGLVSILAASISVFALMINRLVKGTPATKLQKWGICLALLGITIVFGNQLLIKVDVIEIVAMIVI
LCAMFGSAFIQIKVQQRIRSLPILSFNSLSMLSGGAVLLISSLIFESGTRTFSGVSLYALLYLAVVGSILGFWINIYLLK
KWHISKATSHLFISPVIALYIGFLFLDEKLNANIYLGTLFVIFGVMFINLKKEERIAKIDETKQKLGHHLSK
>Mature_312_residues
MLTNVLKYRVHILFIVLCLIGGTTWAFQKAGLSDSLPFWSAGMRFMIASILIAAFLLARRQFVLSKELLVLSFLNGIMYF
SVPFGSVYWASLYLPSGLVSILAASISVFALMINRLVKGTPATKLQKWGICLALLGITIVFGNQLLIKVDVIEIVAMIVI
LCAMFGSAFIQIKVQQRIRSLPILSFNSLSMLSGGAVLLISSLIFESGTRTFSGVSLYALLYLAVVGSILGFWINIYLLK
KWHISKATSHLFISPVIALYIGFLFLDEKLNANIYLGTLFVIFGVMFINLKKEERIAKIDETKQKLGHHLSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI87081929, Length=281, Percent_Identity=25.6227758007117, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788269, Length=201, Percent_Identity=28.8557213930348, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34642; Mature: 34642

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTNVLKYRVHILFIVLCLIGGTTWAFQKAGLSDSLPFWSAGMRFMIASILIAAFLLARR
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QFVLSKELLVLSFLNGIMYFSVPFGSVYWASLYLPSGLVSILAASISVFALMINRLVKGT
HHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PATKLQKWGICLALLGITIVFGNQLLIKVDVIEIVAMIVILCAMFGSAFIQIKVQQRIRS
CHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHH
LPILSFNSLSMLSGGAVLLISSLIFESGTRTFSGVSLYALLYLAVVGSILGFWINIYLLK
CCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KWHISKATSHLFISPVIALYIGFLFLDEKLNANIYLGTLFVIFGVMFINLKKEERIAKID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
ETKQKLGHHLSK
HHHHHHHHHCCC
>Mature Secondary Structure
MLTNVLKYRVHILFIVLCLIGGTTWAFQKAGLSDSLPFWSAGMRFMIASILIAAFLLARR
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QFVLSKELLVLSFLNGIMYFSVPFGSVYWASLYLPSGLVSILAASISVFALMINRLVKGT
HHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PATKLQKWGICLALLGITIVFGNQLLIKVDVIEIVAMIVILCAMFGSAFIQIKVQQRIRS
CHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHH
LPILSFNSLSMLSGGAVLLISSLIFESGTRTFSGVSLYALLYLAVVGSILGFWINIYLLK
CCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KWHISKATSHLFISPVIALYIGFLFLDEKLNANIYLGTLFVIFGVMFINLKKEERIAKID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
ETKQKLGHHLSK
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]