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The map label for this gene is yxiD [H]

Identifier: 52787901

GI number: 52787901

Start: 4059445

End: 4061037

Strand: Reverse

Name: yxiD [H]

Synonym: BLi04224

Alternate gene names: 52787901

Gene position: 4061037-4059445 (Counterclockwise)

Preceding gene: 52787902

Following gene: 52787900

Centisome position: 96.17

GC content: 40.18

Gene sequence:

>1593_bases
TTGAAAGTTTTAGATGTTTCTGAAGTCATTGACGCGATTGACCAATTGATTAAGGAAAAAAAGCAGGAGGAAAAAGAGAT
CAACGCCATAAGGGAAAGTGTACAAAAAATTGCAGAGCTTGATGATGCATTAAAAGGAGAAGGCGGAAATGCGATCAAAG
AACACTTTTCTGTTCTTCATCTTCCCGTGCTGCTTTATTTTCAGCACTTTATAGATCAATACATACAGAATTTAAAAGAC
ATTAAAGCAAAAATCAGAACTTATGAATCAACAGAGGGTTTTGTAAAAGAAGAATTTCTGACGCATGACGTCAAAAAGGG
CTTAACAGAACTGAAACGTCAAACGAATGATACGGTTGATTCGATTAATGACGAAGTTGATAAAATCAGCCACTTAATTG
GGGGCGGATCTATCTCTTTGGCATCATTTAATGAGCATATTTCCGAAGCCAAAAAACATGTGAACAACACGGTGTCTGAT
TTAAAAGAGCTTGATCGCGATGCTAATTCTATATTAAAACAATCGTCAAATTCGATCGCTCAGCTATCCAAGCTCACTGA
AAAGGTGAACACTTGGTCAAAGGGAGGCGCGATCTTATCTAAAAAAACGATTAAAGAGGTTGAAAACTACTTTTCTGAAA
CAGATGTCGTTAAACAAATGATTGACGAAGCCGTTGATTTAGCAGAAAAACAAGACGATCCGACAATGATGGGCAGAATC
GCTGAATGGCTTGATTTAATCGGAACAGGAAACGGCGCGTTGGCCGTAACAAAAGGCGTCATAGCCGTGAATGTACTGGC
GACGAAAATGCTTGAGCTTGAAAAAGACGGAAAAGGAAACTTCCGTGTGAAAGCCTCTCCGAAATGGACGCAAGGAGCTA
ACGGAAAATACGATTCCAAGGTGGCTCAGTTTGTTTACAACATCCTGAAAAAAGGCGATCCAAACTCAAGCAAACCAATA
AAAAAATGGCTCGGCAAATTTCAAAATAAACCAAGCGGCCTTTTGAGAAAGATTGTTGGATTGGGGCCTAACACAACAAG
GATCTCCTACAAGAAAATTTTGGAGAGCCAAAGTTTCCTAAAGCATAAGCCAGAGGAACTGAAGAGTTATAAGACTAAGG
TTGATGTGAAAGGGACTGTTGGGAAGTTTAAGGATGAAGCTAGTATTACAAAACTCGCCAAAAAAATACCTTATGCTGGA
ACAATATTCTCCTTGACTACAAATGGAGCTGAGTTTTTTAGTGATGATAATAAAGATAAATCTTGGTTCGAAAAATTTGG
CCGATTTTCAGCAGGGATTGGAATGGATGCTGGAGTTGGAGCGTTGACCGCTAGCGGAGCTGGACTGGGTTCATTAGTAT
GTCCAGGTCCTGGCACCCTTATTGGAGGAGCAATTGGAGCTGGTATTGGTATAACTGGATCCATAATTGCGGGAGATCAA
GTAAAAGAATGGGGAGAAGATGCTGCAGGTTGGATAGAAGATAAAGGTAAGGAAGCTGGTGAATGGTTAAGTCAAAAGGC
CTCTGAAACTACAGATACAATTTCAGACGGACTCTCAGGTGCAAAGGAATTTGTCACTAGCTGGTTCAGGTAA

Upstream 100 bases:

>100_bases
TATCATCAGTTGAAAAGGACGCATGGTCAAACATTAAAGTCTTGATTGATACTGATAAAAACATCTCTCAAAAAATGAAA
TAAGGAGGGCTGGTTTTCTC

Downstream 100 bases:

>100_bases
TAAGGAGGAGTATAATGTTAGACTCTAAAATTATATTAACAACAAATGAACTCGTTGCCGCATTTTTATTGTGTAGGTAT
GAAAAAGCTGCTGAAGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MKVLDVSEVIDAIDQLIKEKKQEEKEINAIRESVQKIAELDDALKGEGGNAIKEHFSVLHLPVLLYFQHFIDQYIQNLKD
IKAKIRTYESTEGFVKEEFLTHDVKKGLTELKRQTNDTVDSINDEVDKISHLIGGGSISLASFNEHISEAKKHVNNTVSD
LKELDRDANSILKQSSNSIAQLSKLTEKVNTWSKGGAILSKKTIKEVENYFSETDVVKQMIDEAVDLAEKQDDPTMMGRI
AEWLDLIGTGNGALAVTKGVIAVNVLATKMLELEKDGKGNFRVKASPKWTQGANGKYDSKVAQFVYNILKKGDPNSSKPI
KKWLGKFQNKPSGLLRKIVGLGPNTTRISYKKILESQSFLKHKPEELKSYKTKVDVKGTVGKFKDEASITKLAKKIPYAG
TIFSLTTNGAEFFSDDNKDKSWFEKFGRFSAGIGMDAGVGALTASGAGLGSLVCPGPGTLIGGAIGAGIGITGSIIAGDQ
VKEWGEDAAGWIEDKGKEAGEWLSQKASETTDTISDGLSGAKEFVTSWFR

Sequences:

>Translated_530_residues
MKVLDVSEVIDAIDQLIKEKKQEEKEINAIRESVQKIAELDDALKGEGGNAIKEHFSVLHLPVLLYFQHFIDQYIQNLKD
IKAKIRTYESTEGFVKEEFLTHDVKKGLTELKRQTNDTVDSINDEVDKISHLIGGGSISLASFNEHISEAKKHVNNTVSD
LKELDRDANSILKQSSNSIAQLSKLTEKVNTWSKGGAILSKKTIKEVENYFSETDVVKQMIDEAVDLAEKQDDPTMMGRI
AEWLDLIGTGNGALAVTKGVIAVNVLATKMLELEKDGKGNFRVKASPKWTQGANGKYDSKVAQFVYNILKKGDPNSSKPI
KKWLGKFQNKPSGLLRKIVGLGPNTTRISYKKILESQSFLKHKPEELKSYKTKVDVKGTVGKFKDEASITKLAKKIPYAG
TIFSLTTNGAEFFSDDNKDKSWFEKFGRFSAGIGMDAGVGALTASGAGLGSLVCPGPGTLIGGAIGAGIGITGSIIAGDQ
VKEWGEDAAGWIEDKGKEAGEWLSQKASETTDTISDGLSGAKEFVTSWFR
>Mature_530_residues
MKVLDVSEVIDAIDQLIKEKKQEEKEINAIRESVQKIAELDDALKGEGGNAIKEHFSVLHLPVLLYFQHFIDQYIQNLKD
IKAKIRTYESTEGFVKEEFLTHDVKKGLTELKRQTNDTVDSINDEVDKISHLIGGGSISLASFNEHISEAKKHVNNTVSD
LKELDRDANSILKQSSNSIAQLSKLTEKVNTWSKGGAILSKKTIKEVENYFSETDVVKQMIDEAVDLAEKQDDPTMMGRI
AEWLDLIGTGNGALAVTKGVIAVNVLATKMLELEKDGKGNFRVKASPKWTQGANGKYDSKVAQFVYNILKKGDPNSSKPI
KKWLGKFQNKPSGLLRKIVGLGPNTTRISYKKILESQSFLKHKPEELKSYKTKVDVKGTVGKFKDEASITKLAKKIPYAG
TIFSLTTNGAEFFSDDNKDKSWFEKFGRFSAGIGMDAGVGALTASGAGLGSLVCPGPGTLIGGAIGAGIGITGSIIAGDQ
VKEWGEDAAGWIEDKGKEAGEWLSQKASETTDTISDGLSGAKEFVTSWFR

Specific function: Unknown

COG id: COG5444

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0720 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003615
- InterPro:   IPR006829 [H]

Pfam domain/function: PF04740 Transposase_30 [H]

EC number: NA

Molecular weight: Translated: 57929; Mature: 57929

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLDVSEVIDAIDQLIKEKKQEEKEINAIRESVQKIAELDDALKGEGGNAIKEHFSVLH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LPVLLYFQHFIDQYIQNLKDIKAKIRTYESTEGFVKEEFLTHDVKKGLTELKRQTNDTVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
SINDEVDKISHLIGGGSISLASFNEHISEAKKHVNNTVSDLKELDRDANSILKQSSNSIA
HHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
QLSKLTEKVNTWSKGGAILSKKTIKEVENYFSETDVVKQMIDEAVDLAEKQDDPTMMGRI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AEWLDLIGTGNGALAVTKGVIAVNVLATKMLELEKDGKGNFRVKASPKWTQGANGKYDSK
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHH
VAQFVYNILKKGDPNSSKPIKKWLGKFQNKPSGLLRKIVGLGPNTTRISYKKILESQSFL
HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
KHKPEELKSYKTKVDVKGTVGKFKDEASITKLAKKIPYAGTIFSLTTNGAEFFSDDNKDK
HCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCH
SWFEKFGRFSAGIGMDAGVGALTASGAGLGSLVCPGPGTLIGGAIGAGIGITGSIIAGDQ
HHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCEECCCCCCHHHHHHHCCCCCCCCEECCHH
VKEWGEDAAGWIEDKGKEAGEWLSQKASETTDTISDGLSGAKEFVTSWFR
HHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVLDVSEVIDAIDQLIKEKKQEEKEINAIRESVQKIAELDDALKGEGGNAIKEHFSVLH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LPVLLYFQHFIDQYIQNLKDIKAKIRTYESTEGFVKEEFLTHDVKKGLTELKRQTNDTVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
SINDEVDKISHLIGGGSISLASFNEHISEAKKHVNNTVSDLKELDRDANSILKQSSNSIA
HHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
QLSKLTEKVNTWSKGGAILSKKTIKEVENYFSETDVVKQMIDEAVDLAEKQDDPTMMGRI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AEWLDLIGTGNGALAVTKGVIAVNVLATKMLELEKDGKGNFRVKASPKWTQGANGKYDSK
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHH
VAQFVYNILKKGDPNSSKPIKKWLGKFQNKPSGLLRKIVGLGPNTTRISYKKILESQSFL
HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
KHKPEELKSYKTKVDVKGTVGKFKDEASITKLAKKIPYAGTIFSLTTNGAEFFSDDNKDK
HCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCH
SWFEKFGRFSAGIGMDAGVGALTASGAGLGSLVCPGPGTLIGGAIGAGIGITGSIIAGDQ
HHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCEECCCCCCHHHHHHHCCCCCCCCEECCHH
VKEWGEDAAGWIEDKGKEAGEWLSQKASETTDTISDGLSGAKEFVTSWFR
HHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704263; 9384377 [H]