| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is deaD [H]
Identifier: 52787898
GI number: 52787898
Start: 4056446
End: 4057891
Strand: Reverse
Name: deaD [H]
Synonym: BLi04221
Alternate gene names: 52787898
Gene position: 4057891-4056446 (Counterclockwise)
Preceding gene: 52787899
Following gene: 52787897
Centisome position: 96.1
GC content: 47.51
Gene sequence:
>1446_bases ATGAGCAAAGCCAGTTTTAGAGACTATGCATTAAGCGGCGATATTACGAAAGCGCTCGATCACTTAGGATATAAGGAGCC GACTGCGGTGCAGAGCGAAGTGATTCCCGCGGTGCTTAAAAAGCGGGATGTTGTGGTGAAATCGCGGACGGGGAGCGGGA AGACGGCCGCGTTCGGAATTCCGCTTTGCGAGCTGACCGAATGGGAAGAGAACAAACCACAAGCCTTGGTTTTGACACCG ACGCGCGAGCTTGCCGCTCAGGTTAAGGAGGATTTGACGAACATCGGCCGCTATAAAAGAATAAAAGCAGCGGCTGTTTA CGGGAAGTCATCCTTTGAACGGCAAAAAACGGAGCTCAAGCAAAAATGCCATATCGTTGTCGGGCCGCCGGGCCGCGTAT TGGATCACATTGAAAAAGGAACCCTTCCATTAGAAAAACTGAAATACCTTGTCATCGATGAGGCCGATGAAATGCTGAAT ATGGGATTTATCGATCAAGTGGGAGCAATCATCCGCCATTTGCCTGAAGAACGGCTGACAATGCTGTTTTCAGCAACTTT TCCGGAGGATGTGGAGCATCTATCCCTTCAATATATGAAAGACCCTTTGAAAATCGAGATTAAAGCAGGCGGTACGACAA CCGCAGACATCGAGCATCAACTGATCATTGTAAACGAAAATGATCCATTTTCGCTTTTAGTGGATCTGTTCATTGTTGAA AACCCGGACAGCTGCATCGTCTTTTGCCGCACACAGGAGCAAGTGAATGAGTTGCAGTGGCGCCTATCCGTTTTGGGTTA TCCGTGCGAGAAAATTCACGGCGGCATGCCTCAGGAGGATCGTTTTGCCGTGATGAACCGTTTCAGACGGGGAGCGTTCC GCTATTTAATCGCGACAGATGTGGCGGCAAGAGGCATCGACATTGAGAACATCACACATGTCATCAACTATGAGCTGCCA TTAGATCAAGAAAGCTATGTGCATCGTACCGGAAGAACAGGCCGAGCCGGCAGCCGGGGAAAAGCGATTACTCTTGCCAG TGCGCGTGAAAAGAGGATGATTGCTGACATTGAAGACTATATCGGTTTTCATATTCCTATTATTGAGGAGCCGTCAAAAG AAGAAATTGCACGGGCAAAAGCGGCGTTTCAAAAGAAAATCAATAGGAAGCCGGAGCTTAAACAGGACAAGAGCGAATCG TTAAATAAGGAAATCATGAGGCTCTACTTTAACGGGGGAAAAAAGAAGAAGCTTAGAGCTGTTGATTTCGTCGGAACGAT TGCTAAAATTGACGGCGTCTCCGCCGAGGATATCGGGATTATCACGATCCAGGAGCAAGGTTCATTCGTTGAAATTTTAA ACGGCAAAGGTCCGCTCGTCTTAGATGCGATGAAAAACACGACAGTGAAAGGGAAATTGCTGAAAGTGCATAAAGCGAGG AAATAA
Upstream 100 bases:
>100_bases CTCTTTGTCATGTCTTTTTGAAATCAGTCATGATTAGCGTATAATCACATTCATAACACCGTCATCCACTGGAAATCATA TGACCAAAAGGAGTTCATTC
Downstream 100 bases:
>100_bases TCTTAGGCTGCCGATTTTGTCGGGAGCTTTTTTGCTCGTAATAAACCTTGGATAAGCAGCATATGATGGATTGTCAAAAA ATGAAAGCGTTTTAAAAGAG
Product: DeaD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MSKASFRDYALSGDITKALDHLGYKEPTAVQSEVIPAVLKKRDVVVKSRTGSGKTAAFGIPLCELTEWEENKPQALVLTP TRELAAQVKEDLTNIGRYKRIKAAAVYGKSSFERQKTELKQKCHIVVGPPGRVLDHIEKGTLPLEKLKYLVIDEADEMLN MGFIDQVGAIIRHLPEERLTMLFSATFPEDVEHLSLQYMKDPLKIEIKAGGTTTADIEHQLIIVNENDPFSLLVDLFIVE NPDSCIVFCRTQEQVNELQWRLSVLGYPCEKIHGGMPQEDRFAVMNRFRRGAFRYLIATDVAARGIDIENITHVINYELP LDQESYVHRTGRTGRAGSRGKAITLASAREKRMIADIEDYIGFHIPIIEEPSKEEIARAKAAFQKKINRKPELKQDKSES LNKEIMRLYFNGGKKKKLRAVDFVGTIAKIDGVSAEDIGIITIQEQGSFVEILNGKGPLVLDAMKNTTVKGKLLKVHKAR K
Sequences:
>Translated_481_residues MSKASFRDYALSGDITKALDHLGYKEPTAVQSEVIPAVLKKRDVVVKSRTGSGKTAAFGIPLCELTEWEENKPQALVLTP TRELAAQVKEDLTNIGRYKRIKAAAVYGKSSFERQKTELKQKCHIVVGPPGRVLDHIEKGTLPLEKLKYLVIDEADEMLN MGFIDQVGAIIRHLPEERLTMLFSATFPEDVEHLSLQYMKDPLKIEIKAGGTTTADIEHQLIIVNENDPFSLLVDLFIVE NPDSCIVFCRTQEQVNELQWRLSVLGYPCEKIHGGMPQEDRFAVMNRFRRGAFRYLIATDVAARGIDIENITHVINYELP LDQESYVHRTGRTGRAGSRGKAITLASAREKRMIADIEDYIGFHIPIIEEPSKEEIARAKAAFQKKINRKPELKQDKSES LNKEIMRLYFNGGKKKKLRAVDFVGTIAKIDGVSAEDIGIITIQEQGSFVEILNGKGPLVLDAMKNTTVKGKLLKVHKAR K >Mature_480_residues SKASFRDYALSGDITKALDHLGYKEPTAVQSEVIPAVLKKRDVVVKSRTGSGKTAAFGIPLCELTEWEENKPQALVLTPT RELAAQVKEDLTNIGRYKRIKAAAVYGKSSFERQKTELKQKCHIVVGPPGRVLDHIEKGTLPLEKLKYLVIDEADEMLNM GFIDQVGAIIRHLPEERLTMLFSATFPEDVEHLSLQYMKDPLKIEIKAGGTTTADIEHQLIIVNENDPFSLLVDLFIVEN PDSCIVFCRTQEQVNELQWRLSVLGYPCEKIHGGMPQEDRFAVMNRFRRGAFRYLIATDVAARGIDIENITHVINYELPL DQESYVHRTGRTGRAGSRGKAITLASAREKRMIADIEDYIGFHIPIIEEPSKEEIARAKAAFQKKINRKPELKQDKSESL NKEIMRLYFNGGKKKKLRAVDFVGTIAKIDGVSAEDIGIITIQEQGSFVEILNGKGPLVLDAMKNTTVKGKLLKVHKARK
Specific function: Has a helix-destabilizing activity. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. May function in rRNA maturation and ribosome biogenesis [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=362, Percent_Identity=36.1878453038674, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI301171467, Length=380, Percent_Identity=37.8947368421053, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI301171475, Length=380, Percent_Identity=37.8947368421053, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI87196351, Length=380, Percent_Identity=37.8947368421053, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI20149629, Length=364, Percent_Identity=36.5384615384615, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI169881239, Length=361, Percent_Identity=37.9501385041551, Blast_Score=245, Evalue=6e-65, Organism=Homo sapiens, GI13514809, Length=361, Percent_Identity=37.9501385041551, Blast_Score=245, Evalue=6e-65, Organism=Homo sapiens, GI41327773, Length=362, Percent_Identity=36.1878453038674, Blast_Score=239, Evalue=6e-63, Organism=Homo sapiens, GI41327771, Length=376, Percent_Identity=35.3723404255319, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI164664518, Length=364, Percent_Identity=34.3406593406593, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI50659095, Length=395, Percent_Identity=35.4430379746835, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI31542656, Length=366, Percent_Identity=36.6120218579235, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI4503529, Length=370, Percent_Identity=35.9459459459459, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI83700235, Length=359, Percent_Identity=36.2116991643454, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI224593278, Length=360, Percent_Identity=33.0555555555556, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI45446747, Length=361, Percent_Identity=34.3490304709141, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI45446743, Length=361, Percent_Identity=34.3490304709141, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI148613856, Length=334, Percent_Identity=35.6287425149701, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI38201710, Length=334, Percent_Identity=35.6287425149701, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI4758138, Length=365, Percent_Identity=32.8767123287671, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI13129006, Length=399, Percent_Identity=33.3333333333333, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI222352149, Length=401, Percent_Identity=32.9177057356608, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI4758112, Length=382, Percent_Identity=31.151832460733, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI18375623, Length=382, Percent_Identity=31.151832460733, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI55749865, Length=364, Percent_Identity=32.6923076923077, Blast_Score=209, Evalue=6e-54, Organism=Homo sapiens, GI21040371, Length=379, Percent_Identity=30.6068601583113, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI41327776, Length=364, Percent_Identity=33.7912087912088, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=33.8935574229692, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=33.8935574229692, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=33.8935574229692, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=33.8935574229692, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI21071032, Length=355, Percent_Identity=32.112676056338, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI164419743, Length=374, Percent_Identity=32.3529411764706, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI51094101, Length=376, Percent_Identity=32.1808510638298, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI188035877, Length=360, Percent_Identity=32.5, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI8922886, Length=390, Percent_Identity=32.3076923076923, Blast_Score=192, Evalue=8e-49, Organism=Homo sapiens, GI6005743, Length=390, Percent_Identity=32.3076923076923, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI62241022, Length=370, Percent_Identity=32.972972972973, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI256223453, Length=379, Percent_Identity=30.8707124010554, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI13514831, Length=361, Percent_Identity=33.2409972299169, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI9506931, Length=456, Percent_Identity=29.3859649122807, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=33.6206896551724, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI164419732, Length=369, Percent_Identity=30.6233062330623, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI38569503, Length=378, Percent_Identity=31.4814814814815, Blast_Score=172, Evalue=7e-43, Organism=Homo sapiens, GI38569505, Length=378, Percent_Identity=31.4814814814815, Blast_Score=172, Evalue=9e-43, Organism=Homo sapiens, GI41327779, Length=375, Percent_Identity=32.5333333333333, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI38327634, Length=344, Percent_Identity=33.1395348837209, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI17505907, Length=420, Percent_Identity=28.0952380952381, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI256773275, Length=376, Percent_Identity=29.5212765957447, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI9966805, Length=319, Percent_Identity=31.974921630094, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI154759257, Length=408, Percent_Identity=28.6764705882353, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI20336298, Length=356, Percent_Identity=27.8089887640449, Blast_Score=109, Evalue=5e-24, Organism=Homo sapiens, GI4826686, Length=120, Percent_Identity=40, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI87082221, Length=392, Percent_Identity=42.3469387755102, Blast_Score=311, Evalue=4e-86, Organism=Escherichia coli, GI1787605, Length=459, Percent_Identity=36.8191721132898, Blast_Score=295, Evalue=6e-81, Organism=Escherichia coli, GI1787016, Length=383, Percent_Identity=38.9033942558747, Blast_Score=273, Evalue=2e-74, Organism=Escherichia coli, GI1790214, Length=376, Percent_Identity=34.5744680851064, Blast_Score=236, Evalue=3e-63, Organism=Escherichia coli, GI1788930, Length=393, Percent_Identity=32.5699745547074, Blast_Score=185, Evalue=7e-48, Organism=Escherichia coli, GI48994977, Length=341, Percent_Identity=24.9266862170088, Blast_Score=81, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71995724, Length=362, Percent_Identity=37.0165745856354, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI17507121, Length=362, Percent_Identity=36.7403314917127, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI71987143, Length=362, Percent_Identity=35.0828729281768, Blast_Score=259, Evalue=2e-69, Organism=Caenorhabditis elegans, GI17555296, Length=363, Percent_Identity=37.1900826446281, Blast_Score=234, Evalue=5e-62, Organism=Caenorhabditis elegans, GI17510307, Length=377, Percent_Identity=36.3395225464191, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17510309, Length=377, Percent_Identity=36.3395225464191, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI71995514, Length=377, Percent_Identity=36.3395225464191, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI71995718, Length=379, Percent_Identity=35.8839050131926, Blast_Score=231, Evalue=7e-61, Organism=Caenorhabditis elegans, GI32565321, Length=387, Percent_Identity=32.5581395348837, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI17552114, Length=353, Percent_Identity=33.1444759206799, Blast_Score=221, Evalue=6e-58, Organism=Caenorhabditis elegans, GI86570094, Length=337, Percent_Identity=36.4985163204748, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI115533224, Length=352, Percent_Identity=36.6477272727273, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI71982858, Length=379, Percent_Identity=31.1345646437995, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI115532546, Length=372, Percent_Identity=32.258064516129, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI115532548, Length=372, Percent_Identity=32.258064516129, Blast_Score=205, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17507945, Length=354, Percent_Identity=33.0508474576271, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17510559, Length=384, Percent_Identity=30.9895833333333, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17537549, Length=340, Percent_Identity=34.4117647058824, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI17552642, Length=362, Percent_Identity=33.4254143646409, Blast_Score=201, Evalue=7e-52, Organism=Caenorhabditis elegans, GI71999646, Length=361, Percent_Identity=31.8559556786704, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI71999644, Length=371, Percent_Identity=31.5363881401617, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17509811, Length=376, Percent_Identity=34.0425531914894, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=33.2432432432432, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=30.8108108108108, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=30.8108108108108, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17553716, Length=356, Percent_Identity=28.6516853932584, Blast_Score=175, Evalue=6e-44, Organism=Caenorhabditis elegans, GI17505370, Length=342, Percent_Identity=31.2865497076023, Blast_Score=171, Evalue=9e-43, Organism=Caenorhabditis elegans, GI17536099, Length=394, Percent_Identity=30.4568527918782, Blast_Score=169, Evalue=4e-42, Organism=Caenorhabditis elegans, GI17536101, Length=394, Percent_Identity=30.4568527918782, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI193206561, Length=345, Percent_Identity=27.2463768115942, Blast_Score=164, Evalue=7e-41, Organism=Caenorhabditis elegans, GI17536103, Length=394, Percent_Identity=30.4568527918782, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI25148203, Length=406, Percent_Identity=26.3546798029557, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17508543, Length=384, Percent_Identity=28.125, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI17507641, Length=385, Percent_Identity=31.4285714285714, Blast_Score=157, Evalue=8e-39, Organism=Caenorhabditis elegans, GI193208216, Length=374, Percent_Identity=29.6791443850267, Blast_Score=151, Evalue=7e-37, Organism=Caenorhabditis elegans, GI32564046, Length=370, Percent_Identity=31.6216216216216, Blast_Score=147, Evalue=8e-36, Organism=Caenorhabditis elegans, GI71990816, Length=403, Percent_Identity=29.7766749379653, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI25148291, Length=338, Percent_Identity=27.5147928994083, Blast_Score=131, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17556951, Length=365, Percent_Identity=28.4931506849315, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI71982862, Length=201, Percent_Identity=33.3333333333333, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI71997889, Length=399, Percent_Identity=26.5664160401003, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI25148205, Length=332, Percent_Identity=24.3975903614458, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17566630, Length=329, Percent_Identity=26.4437689969605, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71987152, Length=99, Percent_Identity=43.4343434343434, Blast_Score=95, Evalue=8e-20, Organism=Saccharomyces cerevisiae, GI6320224, Length=366, Percent_Identity=35.2459016393443, Blast_Score=249, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6321856, Length=369, Percent_Identity=36.3143631436314, Blast_Score=244, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6324778, Length=361, Percent_Identity=35.7340720221607, Blast_Score=234, Evalue=3e-62, Organism=Saccharomyces cerevisiae, GI6325138, Length=352, Percent_Identity=36.6477272727273, Blast_Score=233, Evalue=5e-62, Organism=Saccharomyces cerevisiae, GI6324217, Length=369, Percent_Identity=34.1463414634146, Blast_Score=226, Evalue=7e-60, Organism=Saccharomyces cerevisiae, GI6320041, Length=364, Percent_Identity=33.5164835164835, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6321963, Length=376, Percent_Identity=36.1702127659575, Blast_Score=220, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6321360, Length=374, Percent_Identity=34.7593582887701, Blast_Score=219, Evalue=7e-58, Organism=Saccharomyces cerevisiae, GI6322912, Length=368, Percent_Identity=34.5108695652174, Blast_Score=219, Evalue=8e-58, Organism=Saccharomyces cerevisiae, GI6322323, Length=368, Percent_Identity=34.5108695652174, Blast_Score=219, Evalue=8e-58, Organism=Saccharomyces cerevisiae, GI6323021, Length=351, Percent_Identity=35.042735042735, Blast_Score=207, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6324620, Length=372, Percent_Identity=31.989247311828, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6319618, Length=413, Percent_Identity=31.7191283292978, Blast_Score=186, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6320119, Length=373, Percent_Identity=30.2949061662198, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6323947, Length=350, Percent_Identity=34.2857142857143, Blast_Score=181, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6322427, Length=363, Percent_Identity=32.7823691460055, Blast_Score=176, Evalue=7e-45, Organism=Saccharomyces cerevisiae, GI6319714, Length=362, Percent_Identity=30.939226519337, Blast_Score=173, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6320449, Length=378, Percent_Identity=30.6878306878307, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6321111, Length=381, Percent_Identity=32.0209973753281, Blast_Score=167, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6323306, Length=411, Percent_Identity=27.4939172749392, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6321267, Length=370, Percent_Identity=31.6216216216216, Blast_Score=153, Evalue=4e-38, Organism=Saccharomyces cerevisiae, GI6322876, Length=471, Percent_Identity=28.0254777070064, Blast_Score=132, Evalue=9e-32, Organism=Saccharomyces cerevisiae, GI6320173, Length=259, Percent_Identity=30.5019305019305, Blast_Score=130, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6324366, Length=354, Percent_Identity=27.683615819209, Blast_Score=130, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6320400, Length=401, Percent_Identity=27.930174563591, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6321374, Length=253, Percent_Identity=25.296442687747, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24645031, Length=362, Percent_Identity=35.0828729281768, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI24582080, Length=370, Percent_Identity=36.2162162162162, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24582078, Length=370, Percent_Identity=36.2162162162162, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI17136248, Length=370, Percent_Identity=36.2162162162162, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24582075, Length=370, Percent_Identity=36.2162162162162, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24585582, Length=394, Percent_Identity=36.0406091370558, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24642151, Length=360, Percent_Identity=36.6666666666667, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI24584399, Length=349, Percent_Identity=36.676217765043, Blast_Score=240, Evalue=1e-63, Organism=Drosophila melanogaster, GI17985987, Length=380, Percent_Identity=35.5263157894737, Blast_Score=234, Evalue=9e-62, Organism=Drosophila melanogaster, GI28574962, Length=355, Percent_Identity=34.6478873239437, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24584994, Length=391, Percent_Identity=34.7826086956522, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI21356161, Length=361, Percent_Identity=35.4570637119114, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24644487, Length=369, Percent_Identity=33.8753387533875, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI45551833, Length=369, Percent_Identity=33.8753387533875, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644485, Length=369, Percent_Identity=33.8753387533875, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI281361218, Length=369, Percent_Identity=33.8753387533875, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644481, Length=369, Percent_Identity=33.8753387533875, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644483, Length=369, Percent_Identity=33.8753387533875, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644479, Length=369, Percent_Identity=33.8753387533875, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI21355075, Length=375, Percent_Identity=33.6, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=34.5505617977528, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI24583279, Length=370, Percent_Identity=30.8108108108108, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI24583281, Length=370, Percent_Identity=30.8108108108108, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI17977678, Length=355, Percent_Identity=33.2394366197183, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI18857967, Length=360, Percent_Identity=34.4444444444444, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI17136814, Length=364, Percent_Identity=34.6153846153846, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI28575014, Length=361, Percent_Identity=32.409972299169, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24581954, Length=383, Percent_Identity=31.0704960835509, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI24581952, Length=383, Percent_Identity=31.0704960835509, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI24581956, Length=383, Percent_Identity=31.0704960835509, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI24642822, Length=398, Percent_Identity=29.8994974874372, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=32.5949367088608, Blast_Score=182, Evalue=6e-46, Organism=Drosophila melanogaster, GI17647335, Length=378, Percent_Identity=28.042328042328, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI28571808, Length=410, Percent_Identity=31.9512195121951, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI28571809, Length=410, Percent_Identity=31.9512195121951, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24643725, Length=390, Percent_Identity=28.2051282051282, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI21355559, Length=365, Percent_Identity=32.0547945205479, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24666101, Length=421, Percent_Identity=30.8788598574822, Blast_Score=159, Evalue=6e-39, Organism=Drosophila melanogaster, GI20130173, Length=303, Percent_Identity=32.3432343234323, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI24668515, Length=330, Percent_Identity=29.3939393939394, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI17136666, Length=438, Percent_Identity=26.9406392694064, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI19920478, Length=359, Percent_Identity=25.3481894150418, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI18859659, Length=206, Percent_Identity=34.9514563106796, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI28571338, Length=206, Percent_Identity=34.9514563106796, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI24640164, Length=375, Percent_Identity=22.6666666666667, Blast_Score=114, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 54021; Mature: 53890
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKASFRDYALSGDITKALDHLGYKEPTAVQSEVIPAVLKKRDVVVKSRTGSGKTAAFGI CCCCCCCCEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEECC PLCELTEWEENKPQALVLTPTRELAAQVKEDLTNIGRYKRIKAAAVYGKSSFERQKTELK CHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHEEECCCHHHHHHHHHH QKCHIVVGPPGRVLDHIEKGTLPLEKLKYLVIDEADEMLNMGFIDQVGAIIRHLPEERLT HCCEEEECCCHHHHHHHHCCCCCHHHHHEEEEECHHHHHCCCCHHHHHHHHHHCCHHHHH MLFSATFPEDVEHLSLQYMKDPLKIEIKAGGTTTADIEHQLIIVNENDPFSLLVDLFIVE HHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCEEECCCEEEEEEECCCCCEEEEEEEEEE NPDSCIVFCRTQEQVNELQWRLSVLGYPCEKIHGGMPQEDRFAVMNRFRRGAFRYLIATD CCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH VAARGIDIENITHVINYELPLDQESYVHRTGRTGRAGSRGKAITLASAREKRMIADIEDY HHHCCCCHHHHHEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHH IGFHIPIIEEPSKEEIARAKAAFQKKINRKPELKQDKSESLNKEIMRLYFNGGKKKKLRA CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEH VDFVGTIAKIDGVSAEDIGIITIQEQGSFVEILNGKGPLVLDAMKNTTVKGKLLKVHKAR HHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCHHEEECCCCC K C >Mature Secondary Structure SKASFRDYALSGDITKALDHLGYKEPTAVQSEVIPAVLKKRDVVVKSRTGSGKTAAFGI CCCCCCCEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEECC PLCELTEWEENKPQALVLTPTRELAAQVKEDLTNIGRYKRIKAAAVYGKSSFERQKTELK CHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHEEECCCHHHHHHHHHH QKCHIVVGPPGRVLDHIEKGTLPLEKLKYLVIDEADEMLNMGFIDQVGAIIRHLPEERLT HCCEEEECCCHHHHHHHHCCCCCHHHHHEEEEECHHHHHCCCCHHHHHHHHHHCCHHHHH MLFSATFPEDVEHLSLQYMKDPLKIEIKAGGTTTADIEHQLIIVNENDPFSLLVDLFIVE HHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCEEECCCEEEEEEECCCCCEEEEEEEEEE NPDSCIVFCRTQEQVNELQWRLSVLGYPCEKIHGGMPQEDRFAVMNRFRRGAFRYLIATD CCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH VAARGIDIENITHVINYELPLDQESYVHRTGRTGRAGSRGKAITLASAREKRMIADIEDY HHHCCCCHHHHHEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHH IGFHIPIIEEPSKEEIARAKAAFQKKINRKPELKQDKSESLNKEIMRLYFNGGKKKKLRA CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEH VDFVGTIAKIDGVSAEDIGIITIQEQGSFVEILNGKGPLVLDAMKNTTVKGKLLKVHKAR HHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCHHEEECCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377; 10481020 [H]