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The map label for this gene is yurN [H]

Identifier: 52787858

GI number: 52787858

Start: 4009071

End: 4010009

Strand: Reverse

Name: yurN [H]

Synonym: BLi04181

Alternate gene names: 52787858

Gene position: 4010009-4009071 (Counterclockwise)

Preceding gene: 52787859

Following gene: 52787857

Centisome position: 94.96

GC content: 44.83

Gene sequence:

>939_bases
ATGAATAAAATTCCGTTGAAAGAAGCAAGGACGGCCTTTCCGCTGAAAAAAATCCCTGCCAGTAAAATAGGGTGGCGGGA
CAATGTGCTGGCCTATACATTTTTAGGTCCGGCCTTGCTGATTTTGTCAGTGTTTCTCGTGATTCCTTCGATTATGGCGG
TTTACTACGCATTTACAGATTATTATTTGTTAACACCTGACCTGCGCAAGTTTGTCGGTTTTGACAACTTTATCAAATTG
TTCAAAGACCCTATTTTCTTGAAAAGTTTGAGCAACACATTGAAATTTGTTGTCCTTGTGATTCCATTACAGATCGGGGC
CGCTCTCGGGCTGGCCCTTCTGTTGAATAAAAAGCGCAAGGCCAATACGTTTTTCAAAGTCGCATACTTTAGCCCCGTCG
TCATGTCGCTTGTTGTCATCTCCGTTTTGTGGCTGTACTTGCTGAATCCGAATGAAGGAATGATAAATAACGTACTGACG
CATGTCGGTTTGCCGCCACAGCCGTTTTTGACAAGTCCTAATCAGGCGATCTTTACAATTGTTTTCGTTTCAGTCTGGCA
GGGAGCCGGATTTCAGATGCTGATTTTTTTAGCGGGCCTGCAAAACATTCCCGGAGATGTCTACGAGGCGGCGCAATTGG
ATGGTATGAATAAATGGCAGCGGTTTATTTATATTACATTGCCTTTGTTGAAACCGACGTCGGTTTTTATCTTTATTACG
ACGCTGATCAGTGCGTTTAAGCTCCTCGTGCAGCCAATGGTCATGACCCAGGGGGGACCGGTCAATTCAACGATGACAGT
TGTCTATTATATTTATCAAACGGGATTTACCGATCGGATGGTCGGCTATGCAAGTTCAATTGCGCTCTTGTTTGGCACGA
TAATTGGATTGGTGACGCTTGCGCAGCGCAAGTTGGTGAAGGAGGATGAAGGCGGATGA

Upstream 100 bases:

>100_bases
TCAGCTTCTTTGATCAGCATCAGGATATTCAATCGGTTCTGGATACGCGTGCAAAAGAAATGCAATCAGCCATCGATAAG
GCAAACTAGAAGGTGGAGCC

Downstream 100 bases:

>100_bases
GAAGGAAATTCGGACCTTTAACGATACTGGAATATATATGCCTTGTTTTGCTGGCGGCTCTGTTTATATTTCCGCTGATT
TGGATGGTCGCTTCATCGAT

Product: YurN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNKIPLKEARTAFPLKKIPASKIGWRDNVLAYTFLGPALLILSVFLVIPSIMAVYYAFTDYYLLTPDLRKFVGFDNFIKL
FKDPIFLKSLSNTLKFVVLVIPLQIGAALGLALLLNKKRKANTFFKVAYFSPVVMSLVVISVLWLYLLNPNEGMINNVLT
HVGLPPQPFLTSPNQAIFTIVFVSVWQGAGFQMLIFLAGLQNIPGDVYEAAQLDGMNKWQRFIYITLPLLKPTSVFIFIT
TLISAFKLLVQPMVMTQGGPVNSTMTVVYYIYQTGFTDRMVGYASSIALLFGTIIGLVTLAQRKLVKEDEGG

Sequences:

>Translated_312_residues
MNKIPLKEARTAFPLKKIPASKIGWRDNVLAYTFLGPALLILSVFLVIPSIMAVYYAFTDYYLLTPDLRKFVGFDNFIKL
FKDPIFLKSLSNTLKFVVLVIPLQIGAALGLALLLNKKRKANTFFKVAYFSPVVMSLVVISVLWLYLLNPNEGMINNVLT
HVGLPPQPFLTSPNQAIFTIVFVSVWQGAGFQMLIFLAGLQNIPGDVYEAAQLDGMNKWQRFIYITLPLLKPTSVFIFIT
TLISAFKLLVQPMVMTQGGPVNSTMTVVYYIYQTGFTDRMVGYASSIALLFGTIIGLVTLAQRKLVKEDEGG
>Mature_312_residues
MNKIPLKEARTAFPLKKIPASKIGWRDNVLAYTFLGPALLILSVFLVIPSIMAVYYAFTDYYLLTPDLRKFVGFDNFIKL
FKDPIFLKSLSNTLKFVVLVIPLQIGAALGLALLLNKKRKANTFFKVAYFSPVVMSLVVISVLWLYLLNPNEGMINNVLT
HVGLPPQPFLTSPNQAIFTIVFVSVWQGAGFQMLIFLAGLQNIPGDVYEAAQLDGMNKWQRFIYITLPLLKPTSVFIFIT
TLISAFKLLVQPMVMTQGGPVNSTMTVVYYIYQTGFTDRMVGYASSIALLFGTIIGLVTLAQRKLVKEDEGG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=299, Percent_Identity=33.4448160535117, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1787570, Length=252, Percent_Identity=28.1746031746032, Blast_Score=98, Evalue=9e-22,
Organism=Escherichia coli, GI1790465, Length=235, Percent_Identity=27.6595744680851, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34814; Mature: 34814

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIPLKEARTAFPLKKIPASKIGWRDNVLAYTFLGPALLILSVFLVIPSIMAVYYAFTD
CCCCCCHHHHHCCCHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YYLLTPDLRKFVGFDNFIKLFKDPIFLKSLSNTLKFVVLVIPLQIGAALGLALLLNKKRK
CEEECHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ANTFFKVAYFSPVVMSLVVISVLWLYLLNPNEGMINNVLTHVGLPPQPFLTSPNQAIFTI
CCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHH
VFVSVWQGAGFQMLIFLAGLQNIPGDVYEAAQLDGMNKWQRFIYITLPLLKPTSVFIFIT
HHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHEEEEEEEECCCCHHHHHHHH
TLISAFKLLVQPMVMTQGGPVNSTMTVVYYIYQTGFTDRMVGYASSIALLFGTIIGLVTL
HHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQRKLVKEDEGG
HHHHHHHCCCCC
>Mature Secondary Structure
MNKIPLKEARTAFPLKKIPASKIGWRDNVLAYTFLGPALLILSVFLVIPSIMAVYYAFTD
CCCCCCHHHHHCCCHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YYLLTPDLRKFVGFDNFIKLFKDPIFLKSLSNTLKFVVLVIPLQIGAALGLALLLNKKRK
CEEECHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ANTFFKVAYFSPVVMSLVVISVLWLYLLNPNEGMINNVLTHVGLPPQPFLTSPNQAIFTI
CCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHH
VFVSVWQGAGFQMLIFLAGLQNIPGDVYEAAQLDGMNKWQRFIYITLPLLKPTSVFIFIT
HHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHEEEEEEEECCCCHHHHHHHH
TLISAFKLLVQPMVMTQGGPVNSTMTVVYYIYQTGFTDRMVGYASSIALLFGTIIGLVTL
HHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQRKLVKEDEGG
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]