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The map label for this gene is yxlJ

Identifier: 52787769

GI number: 52787769

Start: 3916506

End: 3917096

Strand: Reverse

Name: yxlJ

Synonym: BLi04092

Alternate gene names: NA

Gene position: 3917096-3916506 (Counterclockwise)

Preceding gene: 52787774

Following gene: 52787768

Centisome position: 92.76

GC content: 52.45

Gene sequence:

>591_bases
ATGAATCCAGCTCACGAACCTCTCCCGCTCGAATTTTACAACAAGCCAACAATTGAACTTGCCAGGTCCCTGTTGGGCTG
TCTTCTCGTTAAAGAAACGGAAGAAGGGCCTGCTTCAGGATATATTGTGGAGACAGAGGCTTATAAAGGGCCAGGGGACA
GAGCAGCTCACAGCTATGGCAACCGCCGGACAAAGCGCACCGAAATCATGTATCGTGAAGCCGGCGTGGTGTATACGTAC
ACCATGCATACCCACACACTCATCAATGTTGTAAGCGGAGGAGCCGATGAACCTGAGGCCGTGCTGATCAGAGCGCTTGA
ACCTCATGAAGGCCTCGCGCTGATGGAGAAGCGAAGGAGCGGAAAGAAACCGCGCGATTGGACAAACGGTCCGGGAAAGC
TGACAAAGGCGCTTTCCATCACGATGAACGATTACGGCAGACCGCTGACGGGGCCGCCGCTTTATATCGCAAAAGGGTAT
GAACCCCAAGATATTTTGAGCGGTCCGCGAATTGGCATTGACAACTCAGGTGAAGCGAGGGAATACCCTTGGCGATTCTG
GATAAAAGGGAACCGCTATGTCTCAAGATAG

Upstream 100 bases:

>100_bases
ATTGCCTTCATTTCTGGCATCTCGTCTGTCGAAAATGGTAAAATATATCACAATCGACAAAGAGGCGATTTGCTTTTTAG
CAAAAAGGAGGCCAACAAAA

Downstream 100 bases:

>100_bases
TTAAAAGGTTTGGCTCCCGTTCATCAGGGAAAACAGTAAAAAAAACAGGAGGGAGTCAAGCCATGAAAAAAATGATTAAA
AGCGCCGTCAAATGGGCGCC

Product: 3-methyladenine DNA glycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNPAHEPLPLEFYNKPTIELARSLLGCLLVKETEEGPASGYIVETEAYKGPGDRAAHSYGNRRTKRTEIMYREAGVVYTY
TMHTHTLINVVSGGADEPEAVLIRALEPHEGLALMEKRRSGKKPRDWTNGPGKLTKALSITMNDYGRPLTGPPLYIAKGY
EPQDILSGPRIGIDNSGEAREYPWRFWIKGNRYVSR

Sequences:

>Translated_196_residues
MNPAHEPLPLEFYNKPTIELARSLLGCLLVKETEEGPASGYIVETEAYKGPGDRAAHSYGNRRTKRTEIMYREAGVVYTY
TMHTHTLINVVSGGADEPEAVLIRALEPHEGLALMEKRRSGKKPRDWTNGPGKLTKALSITMNDYGRPLTGPPLYIAKGY
EPQDILSGPRIGIDNSGEAREYPWRFWIKGNRYVSR
>Mature_196_residues
MNPAHEPLPLEFYNKPTIELARSLLGCLLVKETEEGPASGYIVETEAYKGPGDRAAHSYGNRRTKRTEIMYREAGVVYTY
TMHTHTLINVVSGGADEPEAVLIRALEPHEGLALMEKRRSGKKPRDWTNGPGKLTKALSITMNDYGRPLTGPPLYIAKGY
EPQDILSGPRIGIDNSGEAREYPWRFWIKGNRYVSR

Specific function: Unknown

COG id: COG2094

COG function: function code L; 3-methyladenine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA glycosylase MPG family

Homologues:

Organism=Homo sapiens, GI62632769, Length=203, Percent_Identity=37.4384236453202, Blast_Score=103, Evalue=9e-23,
Organism=Homo sapiens, GI62632771, Length=203, Percent_Identity=37.4384236453202, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI62632765, Length=203, Percent_Identity=37.4384236453202, Blast_Score=103, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): 3MGH_BACLD (Q65DF9)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_081170.1
- RefSeq:   YP_093598.1
- HSSP:   P29372
- ProteinModelPortal:   Q65DF9
- SMR:   Q65DF9
- STRING:   Q65DF9
- EnsemblBacteria:   EBBACT00000054270
- EnsemblBacteria:   EBBACT00000059929
- GeneID:   3029474
- GeneID:   3097706
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi04092
- KEGG:   bli:BL05369
- NMPDR:   fig|279010.5.peg.3502
- eggNOG:   COG2094
- GeneTree:   EBGT00050000001691
- HOGENOM:   HBG664239
- OMA:   EHISSQY
- ProtClustDB:   PRK00802
- BioCyc:   BLIC279010-1:BLI04092-MONOMER
- BioCyc:   BLIC279010:BL05369-MONOMER
- HAMAP:   MF_00527
- InterPro:   IPR011034
- InterPro:   IPR003180
- Gene3D:   G3DSA:3.10.300.10
- PANTHER:   PTHR10429
- TIGRFAMs:   TIGR00567

Pfam domain/function: PF02245 Pur_DNA_glyco; SSF50486 FMT_C_like

EC number: 3.2.2.-

Molecular weight: Translated: 21988; Mature: 21988

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPAHEPLPLEFYNKPTIELARSLLGCLLVKETEEGPASGYIVETEAYKGPGDRAAHSYG
CCCCCCCCCEEECCCCHHHHHHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCHHHHHHC
NRRTKRTEIMYREAGVVYTYTMHTHTLINVVSGGADEPEAVLIRALEPHEGLALMEKRRS
CCCCHHHHEEEECCCEEEEEEECHHEEHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHC
GKKPRDWTNGPGKLTKALSITMNDYGRPLTGPPLYIAKGYEPQDILSGPRIGIDNSGEAR
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCC
EYPWRFWIKGNRYVSR
CCCEEEEEECCEEECC
>Mature Secondary Structure
MNPAHEPLPLEFYNKPTIELARSLLGCLLVKETEEGPASGYIVETEAYKGPGDRAAHSYG
CCCCCCCCCEEECCCCHHHHHHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCHHHHHHC
NRRTKRTEIMYREAGVVYTYTMHTHTLINVVSGGADEPEAVLIRALEPHEGLALMEKRRS
CCCCHHHHEEEECCCEEEEEEECHHEEHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHC
GKKPRDWTNGPGKLTKALSITMNDYGRPLTGPPLYIAKGYEPQDILSGPRIGIDNSGEAR
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCC
EYPWRFWIKGNRYVSR
CCCEEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA