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The map label for this gene is flhO [H]

Identifier: 52787554

GI number: 52787554

Start: 3698629

End: 3699468

Strand: Reverse

Name: flhO [H]

Synonym: BLi03875

Alternate gene names: 52787554

Gene position: 3699468-3698629 (Counterclockwise)

Preceding gene: 52787555

Following gene: 52787553

Centisome position: 87.61

GC content: 47.86

Gene sequence:

>840_bases
ATGTTAAAAGGACTTTATACAGCAACTTCAGCAATGATCACCCAGCAGCGCCGCACAGAGATGCTGACGAATAATATCGC
GAATGCAAATACGCCGGGATATAAAGAAGACCAAGGATCAATACGTTCTTTCCCGGAAATGCTTTTGAGCCGGATTGAGT
CTGATTCTTTCAAAGCCGGCAGCGCTTCGCGTTCGTTTTCAACACAGACGCCAATCGGTTCAATCAATACAGGGGTTTAT
ATGCAGGAACTGAAGCCTCAATTTTCTCAAGGCGATCTGCAAAGCACGAATGAGCCGACAGATATTGCAATCAGCGAAGC
CGAAGTTCCGGTCAACGGCGAAACAAACGATAAAGCGGCGCTTTTCTACGCGGTCCGGCTTGAAAATGGGGATGTACGCT
ATTCAAGAAGCAGCCGTTTTTCTTTAAATGAAAATAATCAATTGACAATAAACGGCCGACTCGTCCTTTCAACGGAAAAC
CGGCCGATCACGGTGGGAAGCGAGAATTTTCAAGTCGCTGAGGACGGAACGGTGACTGAAAACGGCCAAAATCTGGGGAG
GATCGATGTCAGAATCGCGCTCGATACGAGAAATTTAGCAAGAGAAGGCGATGATCTGTATCGTACTGAAAACGGTGAGG
CGCTGCCAAGCGCAGTCGGCAATCCTGAAGTCACTTATTCTGTCAAGCAGGGGATGACCGAACGGTCGAATGTCGACGTG
ACGAGAGCCTATACGGAAATGACCGCTGCCTACCGCTCGTTTGAAGCCAACCAAAAAGTTCTTCAGGCTTATGATAAAAG
CATGGAAAAGGCGGCCAATGAGATTGGAAGGATCGGATAA

Upstream 100 bases:

>100_bases
CAAACGTTCTGTATTAGCAAATATAAATTGCAAGCATTTCGCAAAAGAGGTTTTTTCGATAGGAAACTCTGGAGCATGAC
ACTTATTTTGAGGTGAAATG

Downstream 100 bases:

>100_bases
ATGACCGATCGCGATCAGCGTAAATGGAGGATGTGGAAAAACGATGCTTAGATCCATGATCACGGCTTCAAACACAATGT
TTGAACTGCAAAAACAAATT

Product: FlhO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MLKGLYTATSAMITQQRRTEMLTNNIANANTPGYKEDQGSIRSFPEMLLSRIESDSFKAGSASRSFSTQTPIGSINTGVY
MQELKPQFSQGDLQSTNEPTDIAISEAEVPVNGETNDKAALFYAVRLENGDVRYSRSSRFSLNENNQLTINGRLVLSTEN
RPITVGSENFQVAEDGTVTENGQNLGRIDVRIALDTRNLAREGDDLYRTENGEALPSAVGNPEVTYSVKQGMTERSNVDV
TRAYTEMTAAYRSFEANQKVLQAYDKSMEKAANEIGRIG

Sequences:

>Translated_279_residues
MLKGLYTATSAMITQQRRTEMLTNNIANANTPGYKEDQGSIRSFPEMLLSRIESDSFKAGSASRSFSTQTPIGSINTGVY
MQELKPQFSQGDLQSTNEPTDIAISEAEVPVNGETNDKAALFYAVRLENGDVRYSRSSRFSLNENNQLTINGRLVLSTEN
RPITVGSENFQVAEDGTVTENGQNLGRIDVRIALDTRNLAREGDDLYRTENGEALPSAVGNPEVTYSVKQGMTERSNVDV
TRAYTEMTAAYRSFEANQKVLQAYDKSMEKAANEIGRIG
>Mature_279_residues
MLKGLYTATSAMITQQRRTEMLTNNIANANTPGYKEDQGSIRSFPEMLLSRIESDSFKAGSASRSFSTQTPIGSINTGVY
MQELKPQFSQGDLQSTNEPTDIAISEAEVPVNGETNDKAALFYAVRLENGDVRYSRSSRFSLNENNQLTINGRLVLSTEN
RPITVGSENFQVAEDGTVTENGQNLGRIDVRIALDTRNLAREGDDLYRTENGEALPSAVGNPEVTYSVKQGMTERSNVDV
TRAYTEMTAAYRSFEANQKVLQAYDKSMEKAANEIGRIG

Specific function: Not required for motility [H]

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=282, Percent_Identity=26.5957446808511, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1787317, Length=283, Percent_Identity=25.4416961130742, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 30741; Mature: 30741

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGLYTATSAMITQQRRTEMLTNNIANANTPGYKEDQGSIRSFPEMLLSRIESDSFKAG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
SASRSFSTQTPIGSINTGVYMQELKPQFSQGDLQSTNEPTDIAISEAEVPVNGETNDKAA
CCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEE
LFYAVRLENGDVRYSRSSRFSLNENNQLTINGRLVLSTENRPITVGSENFQVAEDGTVTE
EEEEEEECCCCEEECCCCCEEECCCCEEEEEEEEEEEECCCEEEECCCCEEECCCCCEEC
NGQNLGRIDVRIALDTRNLAREGDDLYRTENGEALPSAVGNPEVTYSVKQGMTERSNVDV
CCCCCCEEEEEEEECCCHHHHCCCHHEECCCCCCCCCCCCCCCEEEHHHHCCCCCCCCCH
TRAYTEMTAAYRSFEANQKVLQAYDKSMEKAANEIGRIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKGLYTATSAMITQQRRTEMLTNNIANANTPGYKEDQGSIRSFPEMLLSRIESDSFKAG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
SASRSFSTQTPIGSINTGVYMQELKPQFSQGDLQSTNEPTDIAISEAEVPVNGETNDKAA
CCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEE
LFYAVRLENGDVRYSRSSRFSLNENNQLTINGRLVLSTENRPITVGSENFQVAEDGTVTE
EEEEEEECCCCEEECCCCCEEECCCCEEEEEEEEEEEECCCEEEECCCCEEECCCCCEEC
NGQNLGRIDVRIALDTRNLAREGDDLYRTENGEALPSAVGNPEVTYSVKQGMTERSNVDV
CCCCCCEEEEEEEECCCHHHHCCCHHEECCCCCCCCCCCCCCCEEEHHHHCCCCCCCCCH
TRAYTEMTAAYRSFEANQKVLQAYDKSMEKAANEIGRIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836311; 9353933; 9384377 [H]