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The map label for this gene is ywqC [H]

Identifier: 52787534

GI number: 52787534

Start: 3682283

End: 3683005

Strand: Reverse

Name: ywqC [H]

Synonym: BLi03855

Alternate gene names: 52787534

Gene position: 3683005-3682283 (Counterclockwise)

Preceding gene: 52787535

Following gene: 52787533

Centisome position: 87.22

GC content: 44.54

Gene sequence:

>723_bases
ATGAGAGATCATATCGGCTTTAAAGATGTGTTCATCGTTTTGAAAAAAAGATTCGTTCTGATCGCACTGATCACCATTGC
GGCTGCTTTGTCCAGCGCTGCCGTCAACTTTTATTGGCTCAAACCCGTCTATCAGGCATCCGCCCAAATCCTCATCAACG
GCCGTCAAACGTCGAACTTCACCGACATCCAGACCAACCTTGAACTTATCAACACATACAACGTCATTATGAAAAGCCCG
ATCATTTTAAATAAGGTTAAAGACGAACTTAACCTTTCGGAAACGGCTGAAGACCTGAAGCAAAAAATCACGGTTATCAG
CGAAAATGAATCGCAGATTGTCAGTATCTCCGCGACTGACAAGGATTATTCCAAGGCGGCGGATATCGCGAATACAGTCG
CCGCCGTATTTCAAAGAGACATTGGCGATATTATGGGTGAAAATGCCGAAATCAGCCTTGTTGCGAAAGCCAATCCCGAT
CATTCACCTGTTCCCGTCAGCCCGAACAAGAAGTTCAACATCGCTCTTTTTACAGGGTTCGGCCTTCTGTTTGGCGCTGG
GCTAGCATTTTTGCTCGAGCTTTTGAAAAATACCGTTCGAAATGAAGAAGACATCGAAAAAGATCTGAATGTTCACGTGT
TGGGAAATATTCTGTATGTAAAACCGAAAAAAGGACAGGCCAGGAAGCTGGAAAGCTTTGTCGGCAAAGACCATACATTC
TGA

Upstream 100 bases:

>100_bases
TTCATTTCTTTCGGAAACGAAATAACCATGTATAATCAAAGGTAGGTGTTTAATTTGCTGAAAATTTAAATAAATACGCG
AATCGTAGAAGGGGGCTTTT

Downstream 100 bases:

>100_bases
AACGGGAAAACACGGGGAGGTCGCATATGATCGATATTCATTGCCACATTCTTGCGGGCGTTGATGATGGAGCAGCATGT
ATGAATGACAGTTTAGAAAT

Product: YwqC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MRDHIGFKDVFIVLKKRFVLIALITIAAALSSAAVNFYWLKPVYQASAQILINGRQTSNFTDIQTNLELINTYNVIMKSP
IILNKVKDELNLSETAEDLKQKITVISENESQIVSISATDKDYSKAADIANTVAAVFQRDIGDIMGENAEISLVAKANPD
HSPVPVSPNKKFNIALFTGFGLLFGAGLAFLLELLKNTVRNEEDIEKDLNVHVLGNILYVKPKKGQARKLESFVGKDHTF

Sequences:

>Translated_240_residues
MRDHIGFKDVFIVLKKRFVLIALITIAAALSSAAVNFYWLKPVYQASAQILINGRQTSNFTDIQTNLELINTYNVIMKSP
IILNKVKDELNLSETAEDLKQKITVISENESQIVSISATDKDYSKAADIANTVAAVFQRDIGDIMGENAEISLVAKANPD
HSPVPVSPNKKFNIALFTGFGLLFGAGLAFLLELLKNTVRNEEDIEKDLNVHVLGNILYVKPKKGQARKLESFVGKDHTF
>Mature_240_residues
MRDHIGFKDVFIVLKKRFVLIALITIAAALSSAAVNFYWLKPVYQASAQILINGRQTSNFTDIQTNLELINTYNVIMKSP
IILNKVKDELNLSETAEDLKQKITVISENESQIVSISATDKDYSKAADIANTVAAVFQRDIGDIMGENAEISLVAKANPD
HSPVPVSPNKKFNIALFTGFGLLFGAGLAFLLELLKNTVRNEEDIEKDLNVHVLGNILYVKPKKGQARKLESFVGKDHTF

Specific function: Required for YwqD kinase activity. May bring YwqD and its substrates into contact. Probably involved in the regulation of capsular polysaccharide biosynthesis [H]

COG id: COG3944

COG function: function code M; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsC/CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 26579; Mature: 26579

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDHIGFKDVFIVLKKRFVLIALITIAAALSSAAVNFYWLKPVYQASAQILINGRQTSNF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHCCEEEEEECCCCCCC
TDIQTNLELINTYNVIMKSPIILNKVKDELNLSETAEDLKQKITVISENESQIVSISATD
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCEEEEEEECC
KDYSKAADIANTVAAVFQRDIGDIMGENAEISLVAKANPDHSPVPVSPNKKFNIALFTGF
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEHHH
GLLFGAGLAFLLELLKNTVRNEEDIEKDLNVHVLGNILYVKPKKGQARKLESFVGKDHTF
HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRDHIGFKDVFIVLKKRFVLIALITIAAALSSAAVNFYWLKPVYQASAQILINGRQTSNF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHCCEEEEEECCCCCCC
TDIQTNLELINTYNVIMKSPIILNKVKDELNLSETAEDLKQKITVISENESQIVSISATD
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCEEEEEEECC
KDYSKAADIANTVAAVFQRDIGDIMGENAEISLVAKANPDHSPVPVSPNKKFNIALFTGF
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEHHH
GLLFGAGLAFLLELLKNTVRNEEDIEKDLNVHVLGNILYVKPKKGQARKLESFVGKDHTF
HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]