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The map label for this gene is tuaB [H]

Identifier: 52787486

GI number: 52787486

Start: 3624217

End: 3625656

Strand: Reverse

Name: tuaB [H]

Synonym: BLi03806

Alternate gene names: 52787486

Gene position: 3625656-3624217 (Counterclockwise)

Preceding gene: 52787487

Following gene: 52787485

Centisome position: 85.86

GC content: 46.32

Gene sequence:

>1440_bases
ATGTCTACCATTACGAAACAAATATTAAGCGGTGCAAAATGGACAAGTGTTTCAACTTTGATCGTCACGGTCATTCAAAT
TATACAGTTTGCACTGCTCGGCAATATCATGACAATTGCCGAATTCGGTTTGGTCGGAATGCTGACCACCGTAACGATTT
TCACACAAATTGTACTCGATATGGGATTCGGGGCCGCTTTAATTCAAAAGGAGAACATCAGTGAACGCCAATTATCGACC
TTGTATTGGCTGAATATCCTAACGGGCATCCTTTTGTTTATCGGCCTCTTTTTCCTGAGTCCGTTCATCGCAGACTTTTA
TCAGCGGGACGAACTTGTTTTTCTAGTGCGGATTTTGGCCGTCATGTTTTTAATCGCCCCGGTCGGCCAGCAGTATCAAT
ATATGCTGCAAAAAGATCTGAAGTTTAATGTGCTGAGCAAAATAGAAGCGGGAGTCACCGTTTTGTCTTTTGTGCTCCTG
CTCGTTTTGGTTTTTCTGATGGATCCGATTGTGGCCTATGCATTGTCACAAGTTTTTCTTAATTCGGTTAAAGGCATCAT
GTTTTTTGCTGTATATTTAAAAAAATGGCGTCCTTCTTTCGTCTTTGCATTGGGGGAAGTGAAAGAATTTTTCTCGTTCG
GCGCGTTTCAGCTTGCTTCAAGGCTTGTAAACAGGCTTGGCGCCAATATCGACATGATTTTAATCGGGCGGTTTCTCGGT
GCGGAAGCATTGGGAATCTATAACCTGGCGTATCAGATTATTACGATTCCCGTATTAAAAATCAATCCGATCGTAACAAG
GGTAGCGTTTCCTGTCTTCTCAAAGAATCAAGGGGACAACCAAACGCTGCGCGAAGGCTTTTTAAATATGACAAAGCTTC
TCGCGCTGATTTCATTCCCGCTCCTGATCGGACTGACGACTGTTTCAGATTTATTTGTTGAAGTCGTCTTCGGAGAAAAA
TGGCTGCAGGCCGTACCGGTTCTGAACATCCTCGCGATTGTCGGGCTGCTCAGGGTTCTGATGAATCCGAACGGATCGGT
TTTGCTGGCGAAGGGGCGAGCAGACCTGGCATTTTATTGGGACAGCGGGATCATGCTCCTTTATGGGCTGTCTCTTTACG
CGGCGGTATTAACGAATGATTTGACGATCACCGCCTGGACATATGCAGCGATCAGCCTGGTCAATTTCTTTATCGGCAGA
TGGCTGCTCAAATATGTCATCCAGCTGAAGCTGGGCGAATATTTCAGAACCGTTGGAAAACCGCTGGCCTTGACGCTGCT
CATGGCATTGCTGGCTCTTGTCTTGAGCGTCGGCAGCAGACATCTGCTTCACGGCGCCATGCTTCAGCTGGCAGTTTCCG
TCGGGATCAGCGGGATTTTTTACGGTTTTCTGGTCGGCAAATTTTATCGGCGGGCTATGAGGGCCCAATTAGGAAGATGA

Upstream 100 bases:

>100_bases
ATTTAACGTTTCTTCTCGATTTGAAGGTTATGCTGAAAACGATTAAAGTAGTATTGACTGGCGAAGGAGCCAGATAATAC
GAGGAAGTTAGGAATATGCT

Downstream 100 bases:

>100_bases
CAGCAGAAAGGGCGGTTCATCATTGAAGGTTCTTTGGATTACCAGCGTTTATCCAAGCAGTCAAAGGCCGGGAGAAGGCG
TTTTTCATGAAACACAGGTT

Product: colanic acid exporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MSTITKQILSGAKWTSVSTLIVTVIQIIQFALLGNIMTIAEFGLVGMLTTVTIFTQIVLDMGFGAALIQKENISERQLST
LYWLNILTGILLFIGLFFLSPFIADFYQRDELVFLVRILAVMFLIAPVGQQYQYMLQKDLKFNVLSKIEAGVTVLSFVLL
LVLVFLMDPIVAYALSQVFLNSVKGIMFFAVYLKKWRPSFVFALGEVKEFFSFGAFQLASRLVNRLGANIDMILIGRFLG
AEALGIYNLAYQIITIPVLKINPIVTRVAFPVFSKNQGDNQTLREGFLNMTKLLALISFPLLIGLTTVSDLFVEVVFGEK
WLQAVPVLNILAIVGLLRVLMNPNGSVLLAKGRADLAFYWDSGIMLLYGLSLYAAVLTNDLTITAWTYAAISLVNFFIGR
WLLKYVIQLKLGEYFRTVGKPLALTLLMALLALVLSVGSRHLLHGAMLQLAVSVGISGIFYGFLVGKFYRRAMRAQLGR

Sequences:

>Translated_479_residues
MSTITKQILSGAKWTSVSTLIVTVIQIIQFALLGNIMTIAEFGLVGMLTTVTIFTQIVLDMGFGAALIQKENISERQLST
LYWLNILTGILLFIGLFFLSPFIADFYQRDELVFLVRILAVMFLIAPVGQQYQYMLQKDLKFNVLSKIEAGVTVLSFVLL
LVLVFLMDPIVAYALSQVFLNSVKGIMFFAVYLKKWRPSFVFALGEVKEFFSFGAFQLASRLVNRLGANIDMILIGRFLG
AEALGIYNLAYQIITIPVLKINPIVTRVAFPVFSKNQGDNQTLREGFLNMTKLLALISFPLLIGLTTVSDLFVEVVFGEK
WLQAVPVLNILAIVGLLRVLMNPNGSVLLAKGRADLAFYWDSGIMLLYGLSLYAAVLTNDLTITAWTYAAISLVNFFIGR
WLLKYVIQLKLGEYFRTVGKPLALTLLMALLALVLSVGSRHLLHGAMLQLAVSVGISGIFYGFLVGKFYRRAMRAQLGR
>Mature_478_residues
STITKQILSGAKWTSVSTLIVTVIQIIQFALLGNIMTIAEFGLVGMLTTVTIFTQIVLDMGFGAALIQKENISERQLSTL
YWLNILTGILLFIGLFFLSPFIADFYQRDELVFLVRILAVMFLIAPVGQQYQYMLQKDLKFNVLSKIEAGVTVLSFVLLL
VLVFLMDPIVAYALSQVFLNSVKGIMFFAVYLKKWRPSFVFALGEVKEFFSFGAFQLASRLVNRLGANIDMILIGRFLGA
EALGIYNLAYQIITIPVLKINPIVTRVAFPVFSKNQGDNQTLREGFLNMTKLLALISFPLLIGLTTVSDLFVEVVFGEKW
LQAVPVLNILAIVGLLRVLMNPNGSVLLAKGRADLAFYWDSGIMLLYGLSLYAAVLTNDLTITAWTYAAISLVNFFIGRW
LLKYVIQLKLGEYFRTVGKPLALTLLMALLALVLSVGSRHLLHGAMLQLAVSVGISGIFYGFLVGKFYRRAMRAQLGR

Specific function: Might be involved in the translocation of teichuronic acid repeating units from the inner to the outer surface of the membrane [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788359, Length=360, Percent_Identity=36.1111111111111, Blast_Score=256, Evalue=3e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 53319; Mature: 53188

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTITKQILSGAKWTSVSTLIVTVIQIIQFALLGNIMTIAEFGLVGMLTTVTIFTQIVLD
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGFGAALIQKENISERQLSTLYWLNILTGILLFIGLFFLSPFIADFYQRDELVFLVRILA
HCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VMFLIAPVGQQYQYMLQKDLKFNVLSKIEAGVTVLSFVLLLVLVFLMDPIVAYALSQVFL
HHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSVKGIMFFAVYLKKWRPSFVFALGEVKEFFSFGAFQLASRLVNRLGANIDMILIGRFLG
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AEALGIYNLAYQIITIPVLKINPIVTRVAFPVFSKNQGDNQTLREGFLNMTKLLALISFP
HHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LLIGLTTVSDLFVEVVFGEKWLQAVPVLNILAIVGLLRVLMNPNGSVLLAKGRADLAFYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEE
DSGIMLLYGLSLYAAVLTNDLTITAWTYAAISLVNFFIGRWLLKYVIQLKLGEYFRTVGK
CCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLALTLLMALLALVLSVGSRHLLHGAMLQLAVSVGISGIFYGFLVGKFYRRAMRAQLGR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STITKQILSGAKWTSVSTLIVTVIQIIQFALLGNIMTIAEFGLVGMLTTVTIFTQIVLD
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGFGAALIQKENISERQLSTLYWLNILTGILLFIGLFFLSPFIADFYQRDELVFLVRILA
HCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VMFLIAPVGQQYQYMLQKDLKFNVLSKIEAGVTVLSFVLLLVLVFLMDPIVAYALSQVFL
HHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSVKGIMFFAVYLKKWRPSFVFALGEVKEFFSFGAFQLASRLVNRLGANIDMILIGRFLG
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AEALGIYNLAYQIITIPVLKINPIVTRVAFPVFSKNQGDNQTLREGFLNMTKLLALISFP
HHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LLIGLTTVSDLFVEVVFGEKWLQAVPVLNILAIVGLLRVLMNPNGSVLLAKGRADLAFYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEE
DSGIMLLYGLSLYAAVLTNDLTITAWTYAAISLVNFFIGRWLLKYVIQLKLGEYFRTVGK
CCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLALTLLMALLALVLSVGSRHLLHGAMLQLAVSVGISGIFYGFLVGKFYRRAMRAQLGR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10048024; 9384377 [H]