| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is yvjB [H]
Identifier: 52787445
GI number: 52787445
Start: 3585731
End: 3587170
Strand: Reverse
Name: yvjB [H]
Synonym: BLi03765
Alternate gene names: 52787445
Gene position: 3587170-3585731 (Counterclockwise)
Preceding gene: 52787446
Following gene: 52787444
Centisome position: 84.95
GC content: 45.69
Gene sequence:
>1440_bases ATGAATCAGAAGATTGTGCGGCTCATCATTGCGCTCAGCCTGTTATGCGGCTTGGTAACAGGCGCCGGCCCGATTCCGTT ACATGATGTCGTTTCAAAAGCATCAGCGGCTGAAGAAGCTGCAGCCAAAAGCACCGCTAGAAACGAATTGGAGAAAATTG AGAAAGCATATGACCTGATTTCAAATGAATATGTGGAGCAGGTCGACAGGGAAAAACTGTTGGAAGGAGCCATACAGGGC ATGCTTTCAACATTGAATGACCCATACTCGGTCTATATGGATAAACAGACGGCAAAGCGGTTTTCAGATTCCCTTGATTC CTCTTTTGAAGGAATCGGTGCAGAAATCGGAATGGAAGACAGAAAAATCATTATCGTTTCTCCTTTTAAACAGTCTCCGG CAGAGAAAGCCGGATTAAAGCCGAACGATGAAATCATTAGCATCGACGGCGATTCCATGAGCGGAATGGATTTGAATGAC GCCGTATTAAAGATCAGAGGCAAAAAGGGATCGACGGTTACACTGAAAGTTCACCGACCCGGAATGAAAGACCAGCTGAC ATTTACGATTAAGCGCGATGAAATCCCGCTGGAAACGGTGTTTGCTTCCATAAAGAAAGTACAGGATAAACCTGTCGGCT ATATCGCAATATCTTCCTTTTCCGAACATACGGCAAAAGATTTTACTGCTGAACTGAAAAAGCTTGAGAAAAAGGGAATA AAAGGGCTCGTTTTGGATGTAAGAGGAAATCCGGGCGGGTACTTGCAAAGCGTGGAAGACATTTTAAAACATTTTGTGAC AAAAGATCATCCGTATATACAAATCGCCGAAAGAAACGGAAATAAAAAACAATACTTCTCAAAATTAAAAGAGAAAAAAC CATACCCTGTGAGCGTGATCACGGACAAGGGCAGCGCTTCGGCTTCGGAAATTCTTGCAGGCGCATTAAAAGAAGCCGAG GGCTACGACGTGGTTGGCGATCCTTCCTTTGGAAAGGGAACCGTCCAGCAGGCGGTGCCGATGGGAGACGGTAGCAATAT TAAGCTGACGCTGTACAAATGGCTGACACCTAAAGGAAATTGGATCCATAAGCAGGGCATTCAGCCGACCGTTCCAGTCA CGCAGCCTGCATATTTCTCGGCGGGGCCTTTACAGCTGAAAGAACCCCTCAAGCCGGATATGAACAACAATGAAATTAAG CGGGCGCAGTTCCTGCTGAAAGGACTCGGGTTTGTCCCCGGCCGGGAAGACGGCTATTACAATGAAAGCACAAAAAAAGC CGTCATGGCGTTTCAGGCAGCAAACAAGCTGAAGCAAACAGGGATCATTGACCAAAAAACGGCAAATACAATGAACCTGC GGATTGAGGAGAAAAAGATGGATGAAAAGAACGATCTTCAGCTGCAAGCCGCATTAAAAGTGCTGTTTAACAAAAAGTGA
Upstream 100 bases:
>100_bases TTTTGCTGTGGAATGGAAAATCGATTACATGATACGGGCGGTTTTGGCGCATACTACATCAAGCAACAAAACATAGTGCA GGCAGAAGAGGAGGTATAGG
Downstream 100 bases:
>100_bases GGGCACGGGATGTCCTCACTTTTTTTATTCTCAGAAAGTAAATTCTCAATCTTTTTACCTAAAATTTTTGCTTTTTCATA AAAAAAACATTCATAATGAA
Product: YvjB
Products: NA
Alternate protein names: C-terminal processing protease [H]
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MNQKIVRLIIALSLLCGLVTGAGPIPLHDVVSKASAAEEAAAKSTARNELEKIEKAYDLISNEYVEQVDREKLLEGAIQG MLSTLNDPYSVYMDKQTAKRFSDSLDSSFEGIGAEIGMEDRKIIIVSPFKQSPAEKAGLKPNDEIISIDGDSMSGMDLND AVLKIRGKKGSTVTLKVHRPGMKDQLTFTIKRDEIPLETVFASIKKVQDKPVGYIAISSFSEHTAKDFTAELKKLEKKGI KGLVLDVRGNPGGYLQSVEDILKHFVTKDHPYIQIAERNGNKKQYFSKLKEKKPYPVSVITDKGSASASEILAGALKEAE GYDVVGDPSFGKGTVQQAVPMGDGSNIKLTLYKWLTPKGNWIHKQGIQPTVPVTQPAYFSAGPLQLKEPLKPDMNNNEIK RAQFLLKGLGFVPGREDGYYNESTKKAVMAFQAANKLKQTGIIDQKTANTMNLRIEEKKMDEKNDLQLQAALKVLFNKK
Sequences:
>Translated_479_residues MNQKIVRLIIALSLLCGLVTGAGPIPLHDVVSKASAAEEAAAKSTARNELEKIEKAYDLISNEYVEQVDREKLLEGAIQG MLSTLNDPYSVYMDKQTAKRFSDSLDSSFEGIGAEIGMEDRKIIIVSPFKQSPAEKAGLKPNDEIISIDGDSMSGMDLND AVLKIRGKKGSTVTLKVHRPGMKDQLTFTIKRDEIPLETVFASIKKVQDKPVGYIAISSFSEHTAKDFTAELKKLEKKGI KGLVLDVRGNPGGYLQSVEDILKHFVTKDHPYIQIAERNGNKKQYFSKLKEKKPYPVSVITDKGSASASEILAGALKEAE GYDVVGDPSFGKGTVQQAVPMGDGSNIKLTLYKWLTPKGNWIHKQGIQPTVPVTQPAYFSAGPLQLKEPLKPDMNNNEIK RAQFLLKGLGFVPGREDGYYNESTKKAVMAFQAANKLKQTGIIDQKTANTMNLRIEEKKMDEKNDLQLQAALKVLFNKK >Mature_479_residues MNQKIVRLIIALSLLCGLVTGAGPIPLHDVVSKASAAEEAAAKSTARNELEKIEKAYDLISNEYVEQVDREKLLEGAIQG MLSTLNDPYSVYMDKQTAKRFSDSLDSSFEGIGAEIGMEDRKIIIVSPFKQSPAEKAGLKPNDEIISIDGDSMSGMDLND AVLKIRGKKGSTVTLKVHRPGMKDQLTFTIKRDEIPLETVFASIKKVQDKPVGYIAISSFSEHTAKDFTAELKKLEKKGI KGLVLDVRGNPGGYLQSVEDILKHFVTKDHPYIQIAERNGNKKQYFSKLKEKKPYPVSVITDKGSASASEILAGALKEAE GYDVVGDPSFGKGTVQQAVPMGDGSNIKLTLYKWLTPKGNWIHKQGIQPTVPVTQPAYFSAGPLQLKEPLKPDMNNNEIK RAQFLLKGLGFVPGREDGYYNESTKKAVMAFQAANKLKQTGIIDQKTANTMNLRIEEKKMDEKNDLQLQAALKVLFNKK
Specific function: Involved in the signal transduction pathway leading to the proteolytic activation of the mother cell transcription factor pro-sigma-K during sporulation. The signaling serine protease CtpB triggers pro-sigma-K processing by cleaving the regulatory protein
COG id: COG0793
COG function: function code M; Periplasmic protease
Gene ontology:
Cell location: Forespore intermembrane space. Note=Is expressed in both the mother cell and forespore compartments but that synthesis in the forespore is both necessary and sufficient for the proper timing of pro-sigma-K processing [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1788134, Length=314, Percent_Identity=31.2101910828025, Blast_Score=122, Evalue=5e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR005151 - InterPro: IPR004447 - InterPro: IPR002477 [H]
Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41; PF01471 PG_binding_1 [H]
EC number: =3.4.21.102 [H]
Molecular weight: Translated: 52776; Mature: 52776
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKIVRLIIALSLLCGLVTGAGPIPLHDVVSKASAAEEAAAKSTARNELEKIEKAYDLI CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNEYVEQVDREKLLEGAIQGMLSTLNDPYSVYMDKQTAKRFSDSLDSSFEGIGAEIGMED HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCC RKIIIVSPFKQSPAEKAGLKPNDEIISIDGDSMSGMDLNDAVLKIRGKKGSTVTLKVHRP CEEEEEECCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECC GMKDQLTFTIKRDEIPLETVFASIKKVQDKPVGYIAISSFSEHTAKDFTAELKKLEKKGI CCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC KGLVLDVRGNPGGYLQSVEDILKHFVTKDHPYIQIAERNGNKKQYFSKLKEKKPYPVSVI CEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEE TDKGSASASEILAGALKEAEGYDVVGDPSFGKGTVQQAVPMGDGSNIKLTLYKWLTPKGN ECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEECCCCC WIHKQGIQPTVPVTQPAYFSAGPLQLKEPLKPDMNNNEIKRAQFLLKGLGFVPGREDGYY EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC NESTKKAVMAFQAANKLKQTGIIDQKTANTMNLRIEEKKMDEKNDLQLQAALKVLFNKK CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNQKIVRLIIALSLLCGLVTGAGPIPLHDVVSKASAAEEAAAKSTARNELEKIEKAYDLI CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNEYVEQVDREKLLEGAIQGMLSTLNDPYSVYMDKQTAKRFSDSLDSSFEGIGAEIGMED HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCC RKIIIVSPFKQSPAEKAGLKPNDEIISIDGDSMSGMDLNDAVLKIRGKKGSTVTLKVHRP CEEEEEECCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECC GMKDQLTFTIKRDEIPLETVFASIKKVQDKPVGYIAISSFSEHTAKDFTAELKKLEKKGI CCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC KGLVLDVRGNPGGYLQSVEDILKHFVTKDHPYIQIAERNGNKKQYFSKLKEKKPYPVSVI CEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEE TDKGSASASEILAGALKEAEGYDVVGDPSFGKGTVQQAVPMGDGSNIKLTLYKWLTPKGN ECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEECCCCC WIHKQGIQPTVPVTQPAYFSAGPLQLKEPLKPDMNNNEIKRAQFLLKGLGFVPGREDGYY EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC NESTKKAVMAFQAANKLKQTGIIDQKTANTMNLRIEEKKMDEKNDLQLQAALKVLFNKK CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9570401; 9384377 [H]