Click here to switch to the map view.

The map label for this gene is csbA [H]

Identifier: 52787441

GI number: 52787441

Start: 3582746

End: 3582979

Strand: Reverse

Name: csbA [H]

Synonym: BLi03760

Alternate gene names: 52787441

Gene position: 3582979-3582746 (Counterclockwise)

Preceding gene: 52787442

Following gene: 52787440

Centisome position: 84.85

GC content: 42.74

Gene sequence:

>234_bases
GTGTTTACAAAAGCCGTTTTTGCACTGATATTTCCTTTTATTCTTGTCTTGTTTTTTACAAGGGTGACCTATAACCATTA
CGTCGGAATTGCGCTCACTGCAGCGCTGTTGTTCGCTTCATATTTAAAAGGTTATACGGAAACCTTTTTTATTGTAGGAC
TTGATATCGCCTCGCTCGTCGCCGGTTCGCTCTATGCGGCAAAAAAGGCGGGCGAAAAGAAGGAAGACTCATAG

Upstream 100 bases:

>100_bases
GCGGCAAGATGATGGACAAAATGAATGAGTGTCCATGTTTGTCCGTTTCTTTGTTCTTTAATATAATCGAATAAGATCAA
GAAACGTGAGGAGGGTTTTT

Downstream 100 bases:

>100_bases
AAACCGTAAGATTGATTGCCGTGAAGCCCTGCTTTTGATGACAAAAAGGAGGGGTTTTTTGATAGATCAGAAATCGCCGG
CTTTTGTGGGAAAACACAAA

Product: CsbA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MFTKAVFALIFPFILVLFFTRVTYNHYVGIALTAALLFASYLKGYTETFFIVGLDIASLVAGSLYAAKKAGEKKEDS

Sequences:

>Translated_77_residues
MFTKAVFALIFPFILVLFFTRVTYNHYVGIALTAALLFASYLKGYTETFFIVGLDIASLVAGSLYAAKKAGEKKEDS
>Mature_77_residues
MFTKAVFALIFPFILVLFFTRVTYNHYVGIALTAALLFASYLKGYTETFFIVGLDIASLVAGSLYAAKKAGEKKEDS

Specific function: Unknown

COG id: COG4897

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019242 [H]

Pfam domain/function: PF09964 DUF2198 [H]

EC number: NA

Molecular weight: Translated: 8495; Mature: 8495

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTKAVFALIFPFILVLFFTRVTYNHYVGIALTAALLFASYLKGYTETFFIVGLDIASLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGSLYAAKKAGEKKEDS
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFTKAVFALIFPFILVLFFTRVTYNHYVGIALTAALLFASYLKGYTETFFIVGLDIASLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGSLYAAKKAGEKKEDS
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1744042; 1847907; 9384377 [H]