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The map label for this gene is yvcK [H]

Identifier: 52787407

GI number: 52787407

Start: 3549842

End: 3550837

Strand: Reverse

Name: yvcK [H]

Synonym: BLi03724

Alternate gene names: 52787407

Gene position: 3550837-3549842 (Counterclockwise)

Preceding gene: 52787408

Following gene: 52787406

Centisome position: 84.09

GC content: 49.9

Gene sequence:

>996_bases
ATGTTACTCACCGGGACATCGAGAAGAAAAGCAGAAAATAGCATGGCAGATCAGAAAAAAATCGCAATCTTTGGCGGAGG
AACTGGCCTTTCGGTACTGCTCAGAGGATTGAAGCAGCAGCCGGTAGACATCACGGCGATTGTGACAGTCGCAGATGACG
GCGGAAGCTCGGGGAGGCTGCGCGACGAGCTGAAAATTCCCCCGCCGGGGGACGTCAGAAATGTCCTCGCTGCACTGTCT
GATGTCGAACCGCTTGTTGAAGACCTGTTCCAGCACCGCTTCTCTAAAGGCGGCGATTTAATCGGCCATTCATTGGGAAA
TTTGATTTTGGCGGCGATGACGAATATAACCGGTGATTTCTTTCACGCCGTCACTGAAATGAGCAAAGTCTTAAATGTGA
GAGGAAGGGTTCTGCCCGCGGCCAATACCAGCGTTGTCCTTCATGCGGAAATGGATGACGGACAGATCATATCAGGGGAA
TCGACGATTCCGTCTTACGGGAAGCGGATTAAACGGGTGTTTTTAACCCCTGAAAAAATCGAACCCGTTCCGGAAACGAT
TGACGTGATCCGCGGCGCCGACCTGATTATTCTCGGCCCCGGAAGCCTGTATACGAGCATCTTGCCGAACCTTCTCGTTC
CGAAGATAAGGGAAGAGATATTAAACGCCCCGGCAAAAAAAGTTTATATTTGCAATGTAATGACCCAGCCGGGAGAAACG
CTGTACTACAGTGCGGCAGACCATGTAAAAGCGCTTAACCAGCATATGGGCGGTCCGTTTATCGATACGATCCTCGTCAA
CAATGAGGAAATCCCGGACGACATTCGGGAACGCTATGCGAAGGAGCAGGCACAGCCCGTCCAGTTTAATATTGATGATC
TGTCTGCGATGGGGCTTGAGGTCATCAAAGATCAGATTGTGACATACGAGAATGGCGTGATCCGTCATGATACACATAAA
GTCGCTTCGCTACTTGTTGATTTGTTAAAAGAATAG

Upstream 100 bases:

>100_bases
AGCCAGCTTGTCATCGCGATTGGCTGCACCGGCGGACAGCATCGTTCTGTGACGCTGGCTGAATACCTTGCCGATTATTT
TAAAAAGGACTACTATACTC

Downstream 100 bases:

>100_bases
CAGGCCTTGGAATGGGGGTGTCTATAATATGTCATTTGCATCGGAAACGAAAAAAGAACTTACAAACCTTGAAGTAAAGG
ATTGCTGCGCGAAAGCAGAG

Product: YvcK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MLLTGTSRRKAENSMADQKKIAIFGGGTGLSVLLRGLKQQPVDITAIVTVADDGGSSGRLRDELKIPPPGDVRNVLAALS
DVEPLVEDLFQHRFSKGGDLIGHSLGNLILAAMTNITGDFFHAVTEMSKVLNVRGRVLPAANTSVVLHAEMDDGQIISGE
STIPSYGKRIKRVFLTPEKIEPVPETIDVIRGADLIILGPGSLYTSILPNLLVPKIREEILNAPAKKVYICNVMTQPGET
LYYSAADHVKALNQHMGGPFIDTILVNNEEIPDDIRERYAKEQAQPVQFNIDDLSAMGLEVIKDQIVTYENGVIRHDTHK
VASLLVDLLKE

Sequences:

>Translated_331_residues
MLLTGTSRRKAENSMADQKKIAIFGGGTGLSVLLRGLKQQPVDITAIVTVADDGGSSGRLRDELKIPPPGDVRNVLAALS
DVEPLVEDLFQHRFSKGGDLIGHSLGNLILAAMTNITGDFFHAVTEMSKVLNVRGRVLPAANTSVVLHAEMDDGQIISGE
STIPSYGKRIKRVFLTPEKIEPVPETIDVIRGADLIILGPGSLYTSILPNLLVPKIREEILNAPAKKVYICNVMTQPGET
LYYSAADHVKALNQHMGGPFIDTILVNNEEIPDDIRERYAKEQAQPVQFNIDDLSAMGLEVIKDQIVTYENGVIRHDTHK
VASLLVDLLKE
>Mature_331_residues
MLLTGTSRRKAENSMADQKKIAIFGGGTGLSVLLRGLKQQPVDITAIVTVADDGGSSGRLRDELKIPPPGDVRNVLAALS
DVEPLVEDLFQHRFSKGGDLIGHSLGNLILAAMTNITGDFFHAVTEMSKVLNVRGRVLPAANTSVVLHAEMDDGQIISGE
STIPSYGKRIKRVFLTPEKIEPVPETIDVIRGADLIILGPGSLYTSILPNLLVPKIREEILNAPAKKVYICNVMTQPGET
LYYSAADHVKALNQHMGGPFIDTILVNNEEIPDDIRERYAKEQAQPVQFNIDDLSAMGLEVIKDQIVTYENGVIRHDTHK
VASLLVDLLKE

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=270, Percent_Identity=33.3333333333333, Blast_Score=130, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 36072; Mature: 36072

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTGTSRRKAENSMADQKKIAIFGGGTGLSVLLRGLKQQPVDITAIVTVADDGGSSGRL
CCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCC
RDELKIPPPGDVRNVLAALSDVEPLVEDLFQHRFSKGGDLIGHSLGNLILAAMTNITGDF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHH
FHAVTEMSKVLNVRGRVLPAANTSVVLHAEMDDGQIISGESTIPSYGKRIKRVFLTPEKI
HHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHCCHHHC
EPVPETIDVIRGADLIILGPGSLYTSILPNLLVPKIREEILNAPAKKVYICNVMTQPGET
CCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCE
LYYSAADHVKALNQHMGGPFIDTILVNNEEIPDDIRERYAKEQAQPVQFNIDDLSAMGLE
EEECHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHH
VIKDQIVTYENGVIRHDTHKVASLLVDLLKE
HHHHHHHHHCCCEEECHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLTGTSRRKAENSMADQKKIAIFGGGTGLSVLLRGLKQQPVDITAIVTVADDGGSSGRL
CCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCC
RDELKIPPPGDVRNVLAALSDVEPLVEDLFQHRFSKGGDLIGHSLGNLILAAMTNITGDF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHH
FHAVTEMSKVLNVRGRVLPAANTSVVLHAEMDDGQIISGESTIPSYGKRIKRVFLTPEKI
HHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHCCHHHC
EPVPETIDVIRGADLIILGPGSLYTSILPNLLVPKIREEILNAPAKKVYICNVMTQPGET
CCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCE
LYYSAADHVKALNQHMGGPFIDTILVNNEEIPDDIRERYAKEQAQPVQFNIDDLSAMGLE
EEECHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHH
VIKDQIVTYENGVIRHDTHKVASLLVDLLKE
HHHHHHHHHCCCEEECHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]