Definition | Bacillus licheniformis ATCC 14580, complete genome. |
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Accession | NC_006322 |
Length | 4,222,645 |
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The map label for this gene is yvfH [H]
Identifier: 52787361
GI number: 52787361
Start: 3503565
End: 3505256
Strand: Direct
Name: yvfH [H]
Synonym: BLi03677
Alternate gene names: 52787361
Gene position: 3503565-3505256 (Clockwise)
Preceding gene: 52787354
Following gene: 52787363
Centisome position: 82.97
GC content: 51.36
Gene sequence:
>1692_bases ATGGGATGGACGCAAGATTATACTCCGCTGGGGAACAGTTTGCTGCTCTCTTCGCTTGCAGCGCTTATACCGATTTTGTA TTTTTTCTGGGCTCTGGCAATCAAAAGAATGAAAGGGCATACAGCAGGCTTGACGACTTTGCTGATCGCACTCGTGCTGG CCGTTTTCGTATACGGCATGCCCGCTCAGCAGGCTGTGATGTCGGCTTCGCAAGGCGCGGTTTACGGGCTGCTGCCGATC GGCTGGATTATCGTGACTTCAGTTTTTTTGTACAAGCTTACGGTGAAAACCGGCCAATTTGAAATCATCAGGAGTTCGGT ATTGTCGATCACAGATGACCGCCGTTTGCAAGCACTTTTGATAGCGTTTTCATTCGGGGCATTTTTGGAAGGTGCGGCAG GCTTCGGCGCCCCTGTCGCGATATCGGCTGCATTGCTTGTCGGCCTCGGCTTTAATCCGTTGTATGCGGCGGGCATATGC CTGATCGCCAACACGGCGCCTGTCGCTTTCGGAGCGATCGGCATCCCGATTATCGCGGTTGAAGGGCCGACTGGGATTCC TGCGATGGACATTTCAAAAATGGTCGGACGCCAGCTGCCGTTTTTATCTGTATTTATTCCGTTTTATTTGATCATCATCA TGAGCGGTTTCAAAAGGGCTTTGGAAGTGCTGCCGGCCATTCTCGTGTCGGGCGTCTCTTTTGCCGTTACACAGTATGTA AGCTCAAACTTCCTGGGGCCTGAGCTCCCGGATATTTTGTCAGCTATCGTATCGCTTATCGCTCTCGCTGTATTCTTAAA ATTTTGGAAACCGAAAACGACATTCAGATTCTCACAAGAAAAGGAAATGGCCGCTGCAGCGGAGGCGCAGCAGCTTGAAC ATCAAAAGGCCTCATACTCGGCGGGGCAGATTTTCAAGGCATGGACACCGTTTTTGCTGCTCACGGCAATGGTCTCCATC TGGGGAATTCCATCTGTCAAACAGGCCTTGACGGGCCATTATGAAGGTTCAAATCCATTGCTGCTGTTCATAAATGATAT CGGCGGCAGGCTGACGTTTGCACCCGGCGTGCCTTTTTTGCACAATCAAATTCTCGATGGTTCCGGAAAACCGCTTGAGG CTCTTTACAAACTTGATCTCGCTGGATCGGCAGGTACGGCGATCCTGATTGCCGCCGTACTGACAAAGTTTGTCACAGGC ATGCCTTGGAAAGAATGGGGCGCCGTATTTACAGATTCGCTGAAGGAACTCGGCAAGCCGATATTAACGATCGCTTCCGT CGTCGGTTTTGCCTATGTCACCAATTCTTCGGGCATGAGCACAACACTGGGCATGTCCCTTGCGATGACCGGTTCAATGT TCGCATTCTTTTCTCCCGTTCTCGGCTGGCTCGGTGTGTTTATAACCGGTTCAGATACGTCGGCCAATTTGCTGTTCGGA AGCCTGCAAAAAATGACGGCACAGTCAGTCGGAATGGAGCCGGTGCTGTCTGTGGCGGCCAACTCTTCAGGCGGCGTCAC AGGAAAAATGATCTCTCCGCAGTCGATTGCGGTCGCCTGCGCAGCCGTCGGACTGGCAGGAAAGGAATCCGACTTGCTTC GCTTTACACTGAAACACAGTCTGTTTCTTCTTTTCCTCGTTTGCATGATCACTTTCCTGCAGCATCATCTGTTTTCGTGG ATGATCCCGTAA
Upstream 100 bases:
>100_bases TTTATGACATTGAGAAATATAATGCTAAATGATCAGTCTTATCATCATGTCATCAGATGACTAGATGAGGCTTTTTTGAC GAACAAAGGGGGAATTGGAG
Downstream 100 bases:
>100_bases AAAAGCCGCCGGCGCTCGTGCCGGACGGCTTCTTTATTGATATCTCTTTCTTACAGACGAAGGCAGTATATTGAGCTGAT CACGGTATTTGGCGACGGTC
Product: YvfH
Products: lactate [Cytoplasm]; Proton [Cytoplasm]; glycolate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MGWTQDYTPLGNSLLLSSLAALIPILYFFWALAIKRMKGHTAGLTTLLIALVLAVFVYGMPAQQAVMSASQGAVYGLLPI GWIIVTSVFLYKLTVKTGQFEIIRSSVLSITDDRRLQALLIAFSFGAFLEGAAGFGAPVAISAALLVGLGFNPLYAAGIC LIANTAPVAFGAIGIPIIAVEGPTGIPAMDISKMVGRQLPFLSVFIPFYLIIIMSGFKRALEVLPAILVSGVSFAVTQYV SSNFLGPELPDILSAIVSLIALAVFLKFWKPKTTFRFSQEKEMAAAAEAQQLEHQKASYSAGQIFKAWTPFLLLTAMVSI WGIPSVKQALTGHYEGSNPLLLFINDIGGRLTFAPGVPFLHNQILDGSGKPLEALYKLDLAGSAGTAILIAAVLTKFVTG MPWKEWGAVFTDSLKELGKPILTIASVVGFAYVTNSSGMSTTLGMSLAMTGSMFAFFSPVLGWLGVFITGSDTSANLLFG SLQKMTAQSVGMEPVLSVAANSSGGVTGKMISPQSIAVACAAVGLAGKESDLLRFTLKHSLFLLFLVCMITFLQHHLFSW MIP
Sequences:
>Translated_563_residues MGWTQDYTPLGNSLLLSSLAALIPILYFFWALAIKRMKGHTAGLTTLLIALVLAVFVYGMPAQQAVMSASQGAVYGLLPI GWIIVTSVFLYKLTVKTGQFEIIRSSVLSITDDRRLQALLIAFSFGAFLEGAAGFGAPVAISAALLVGLGFNPLYAAGIC LIANTAPVAFGAIGIPIIAVEGPTGIPAMDISKMVGRQLPFLSVFIPFYLIIIMSGFKRALEVLPAILVSGVSFAVTQYV SSNFLGPELPDILSAIVSLIALAVFLKFWKPKTTFRFSQEKEMAAAAEAQQLEHQKASYSAGQIFKAWTPFLLLTAMVSI WGIPSVKQALTGHYEGSNPLLLFINDIGGRLTFAPGVPFLHNQILDGSGKPLEALYKLDLAGSAGTAILIAAVLTKFVTG MPWKEWGAVFTDSLKELGKPILTIASVVGFAYVTNSSGMSTTLGMSLAMTGSMFAFFSPVLGWLGVFITGSDTSANLLFG SLQKMTAQSVGMEPVLSVAANSSGGVTGKMISPQSIAVACAAVGLAGKESDLLRFTLKHSLFLLFLVCMITFLQHHLFSW MIP >Mature_562_residues GWTQDYTPLGNSLLLSSLAALIPILYFFWALAIKRMKGHTAGLTTLLIALVLAVFVYGMPAQQAVMSASQGAVYGLLPIG WIIVTSVFLYKLTVKTGQFEIIRSSVLSITDDRRLQALLIAFSFGAFLEGAAGFGAPVAISAALLVGLGFNPLYAAGICL IANTAPVAFGAIGIPIIAVEGPTGIPAMDISKMVGRQLPFLSVFIPFYLIIIMSGFKRALEVLPAILVSGVSFAVTQYVS SNFLGPELPDILSAIVSLIALAVFLKFWKPKTTFRFSQEKEMAAAAEAQQLEHQKASYSAGQIFKAWTPFLLLTAMVSIW GIPSVKQALTGHYEGSNPLLLFINDIGGRLTFAPGVPFLHNQILDGSGKPLEALYKLDLAGSAGTAILIAAVLTKFVTGM PWKEWGAVFTDSLKELGKPILTIASVVGFAYVTNSSGMSTTLGMSLAMTGSMFAFFSPVLGWLGVFITGSDTSANLLFGS LQKMTAQSVGMEPVLSVAANSSGGVTGKMISPQSIAVACAAVGLAGKESDLLRFTLKHSLFLLFLVCMITFLQHHLFSWM IP
Specific function: Is the principal permease for the uptake of L-lactate in B.subtilis [H]
COG id: COG1620
COG function: function code C; L-lactate permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lactate permease family [H]
Homologues:
Organism=Escherichia coli, GI1789347, Length=573, Percent_Identity=54.6247818499127, Blast_Score=559, Evalue=1e-160, Organism=Escherichia coli, GI1790031, Length=566, Percent_Identity=52.2968197879859, Blast_Score=537, Evalue=1e-154,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003804 [H]
Pfam domain/function: PF02652 Lactate_perm [H]
EC number: NA
Molecular weight: Translated: 59840; Mature: 59708
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWTQDYTPLGNSLLLSSLAALIPILYFFWALAIKRMKGHTAGLTTLLIALVLAVFVYGM CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC PAQQAVMSASQGAVYGLLPIGWIIVTSVFLYKLTVKTGQFEIIRSSVLSITDDRRLQALL CHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHH IAFSFGAFLEGAAGFGAPVAISAALLVGLGFNPLYAAGICLIANTAPVAFGAIGIPIIAV HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCHHHEECCCCHHHHCCCCEEEEE EGPTGIPAMDISKMVGRQLPFLSVFIPFYLIIIMSGFKRALEVLPAILVSGVSFAVTQYV ECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSNFLGPELPDILSAIVSLIALAVFLKFWKPKTTFRFSQEKEMAAAAEAQQLEHQKASYS HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHCCC AGQIFKAWTPFLLLTAMVSIWGIPSVKQALTGHYEGSNPLLLFINDIGGRLTFAPGVPFL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCHH HNQILDGSGKPLEALYKLDLAGSAGTAILIAAVLTKFVTGMPWKEWGAVFTDSLKELGKP HHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHH ILTIASVVGFAYVTNSSGMSTTLGMSLAMTGSMFAFFSPVLGWLGVFITGSDTSANLLFG HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHH SLQKMTAQSVGMEPVLSVAANSSGGVTGKMISPQSIAVACAAVGLAGKESDLLRFTLKHS HHHHHHHHHCCCHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH LFLLFLVCMITFLQHHLFSWMIP HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GWTQDYTPLGNSLLLSSLAALIPILYFFWALAIKRMKGHTAGLTTLLIALVLAVFVYGM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC PAQQAVMSASQGAVYGLLPIGWIIVTSVFLYKLTVKTGQFEIIRSSVLSITDDRRLQALL CHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHH IAFSFGAFLEGAAGFGAPVAISAALLVGLGFNPLYAAGICLIANTAPVAFGAIGIPIIAV HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCHHHEECCCCHHHHCCCCEEEEE EGPTGIPAMDISKMVGRQLPFLSVFIPFYLIIIMSGFKRALEVLPAILVSGVSFAVTQYV ECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSNFLGPELPDILSAIVSLIALAVFLKFWKPKTTFRFSQEKEMAAAAEAQQLEHQKASYS HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHCCC AGQIFKAWTPFLLLTAMVSIWGIPSVKQALTGHYEGSNPLLLFINDIGGRLTFAPGVPFL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCHH HNQILDGSGKPLEALYKLDLAGSAGTAILIAAVLTKFVTGMPWKEWGAVFTDSLKELGKP HHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHH ILTIASVVGFAYVTNSSGMSTTLGMSLAMTGSMFAFFSPVLGWLGVFITGSDTSANLLFG HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHH SLQKMTAQSVGMEPVLSVAANSSGGVTGKMISPQSIAVACAAVGLAGKESDLLRFTLKHS HHHHHHHHHCCCHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH LFLLFLVCMITFLQHHLFSWMIP HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: lactate [Periplasm]; Proton [Periplasm]; glycolate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + lactate [Periplasm] = Proton [Cytoplasm] + lactate [Cytoplasm] Proton [Periplasm] + glycolate [Periplasm] = Proton [Cytoplasm] + glycolate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 8969506 [H]