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The map label for this gene is oxdC [H]

Identifier: 52787267

GI number: 52787267

Start: 3420589

End: 3421743

Strand: Direct

Name: oxdC [H]

Synonym: BLi03580

Alternate gene names: 52787267

Gene position: 3420589-3421743 (Clockwise)

Preceding gene: 52787266

Following gene: 52787268

Centisome position: 81.01

GC content: 48.66

Gene sequence:

>1155_bases
ATGGAAAAAAACAAACAAATTCCACAGCCGATCAGAGGAGAAAAAGGAGCGGAAACGAAAATTCCGCACAACGTTGAGCG
CGACCGCCAAAACCCGGACATGCTCGTACCGCCTGAAACCGACCACGGAACGGTGCCAAACATGAAATTTTCATTTTCCG
ATGTCCATAACCGTCTTGAAAAAGGCGGATATGCACGGGAAGTCACAGTTCGCGAGCTGCCGATTTCAGACAAGCTTGCT
TCTGTCAACATGAGGCTGAAACCTGGGGCCATCAGGGAGCTGCACTGGCATAAGGAAGCCGAATGGGCGTATATGCTGTA
CGGAAAAGCACGGATTACGTCTGTTGACCAAGACGGCAGAAACTTTATTGAAGATGTGAAAGAAGGAGATCTCTGGTACT
TCCCGTCAGGTCTGCCGCATTCAATTCAAGCACTTGAAGACGGATGCGAATTCCTGCTTGTCTTCGATGACGGCTCCTTC
TCTGAAAACAGCACCTTCCAGGTGACAGATTGGCTGGCCCATACGCCTGATGAGGTGATTGCCGCAAACTTCGGCATTTC
AAAAGACGTCGTCGCCTCTCTTCCAGTTGAAGAAAAGTATATTTTCCAAGAAGCGATCCCTGGCTGTCTTGAGAAAGACA
AAGTTGAAAGCCCGAACGGAACGGTACCTCTATCTTTCAGCTACAATTTGCTTGAACAGGAACCGATTATATCCATCGGA
GGAAAAGTATGGATTGCCGATTCCACGAACTTCAAAGCATCGAAAACGATCGCTTCTGCGTTAGTGGAAGTCGAACCTGG
AGGCATCCGGGAGCTGCACTGGCATCCGAATACAGACGAATGGCAGTATTACATTTCCGGACAAGCGAAAATGACGGTTT
TCGCTGCCGACGGGCATGCCAGAACATTTAATTACCAGGCCGGAGATGTCGGCTATGTGCCGTTCGCAATGGGACACTAC
GTCCAAAATACAGGAGATGAGCCGCTTCGGTTCCTCGAAATTTTCAAAGACGACCACTATGCTGACGTTTCGTTAAACCA
ATGGCTCGCGCTTGTTCCGGAAGAGCTTGTCCGCCAGCACCTTGACGTCGGCAGCGAATTTACAAAAATGCTCTCTAAAG
AAAAGCATCCGGTCGTCAAATTTGATAAGAAATAA

Upstream 100 bases:

>100_bases
TGATTGACATCGGCCTCACTTTTTTCACTTAACATGACAGAAGGGGAAAACGAAAGGCCTTTCAGCTCTCCTTTACATTT
TTAGAAAGAGGGGATATCAC

Downstream 100 bases:

>100_bases
CCAGCCAGGCTTGCAGGAGACATATCCTGCAGGCCTTTGGCGCTTGTGTACATATTTTAAAGGAGTTGTGTCATGAAACA
TTTCATTATTTGCTGCATAT

Product: OxdC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MEKNKQIPQPIRGEKGAETKIPHNVERDRQNPDMLVPPETDHGTVPNMKFSFSDVHNRLEKGGYAREVTVRELPISDKLA
SVNMRLKPGAIRELHWHKEAEWAYMLYGKARITSVDQDGRNFIEDVKEGDLWYFPSGLPHSIQALEDGCEFLLVFDDGSF
SENSTFQVTDWLAHTPDEVIAANFGISKDVVASLPVEEKYIFQEAIPGCLEKDKVESPNGTVPLSFSYNLLEQEPIISIG
GKVWIADSTNFKASKTIASALVEVEPGGIRELHWHPNTDEWQYYISGQAKMTVFAADGHARTFNYQAGDVGYVPFAMGHY
VQNTGDEPLRFLEIFKDDHYADVSLNQWLALVPEELVRQHLDVGSEFTKMLSKEKHPVVKFDKK

Sequences:

>Translated_384_residues
MEKNKQIPQPIRGEKGAETKIPHNVERDRQNPDMLVPPETDHGTVPNMKFSFSDVHNRLEKGGYAREVTVRELPISDKLA
SVNMRLKPGAIRELHWHKEAEWAYMLYGKARITSVDQDGRNFIEDVKEGDLWYFPSGLPHSIQALEDGCEFLLVFDDGSF
SENSTFQVTDWLAHTPDEVIAANFGISKDVVASLPVEEKYIFQEAIPGCLEKDKVESPNGTVPLSFSYNLLEQEPIISIG
GKVWIADSTNFKASKTIASALVEVEPGGIRELHWHPNTDEWQYYISGQAKMTVFAADGHARTFNYQAGDVGYVPFAMGHY
VQNTGDEPLRFLEIFKDDHYADVSLNQWLALVPEELVRQHLDVGSEFTKMLSKEKHPVVKFDKK
>Mature_384_residues
MEKNKQIPQPIRGEKGAETKIPHNVERDRQNPDMLVPPETDHGTVPNMKFSFSDVHNRLEKGGYAREVTVRELPISDKLA
SVNMRLKPGAIRELHWHKEAEWAYMLYGKARITSVDQDGRNFIEDVKEGDLWYFPSGLPHSIQALEDGCEFLLVFDDGSF
SENSTFQVTDWLAHTPDEVIAANFGISKDVVASLPVEEKYIFQEAIPGCLEKDKVESPNGTVPLSFSYNLLEQEPIISIG
GKVWIADSTNFKASKTIASALVEVEPGGIRELHWHPNTDEWQYYISGQAKMTVFAADGHARTFNYQAGDVGYVPFAMGHY
VQNTGDEPLRFLEIFKDDHYADVSLNQWLALVPEELVRQHLDVGSEFTKMLSKEKHPVVKFDKK

Specific function: Converts oxalate to formate and CO(2) in an O(2)- dependent reaction. Can also catalyze minor side reactions:oxalate oxidation to produce H(2)O(2), and oxalate-dependent, H(2)O(2)-independent dye oxidations [H]

COG id: COG2140

COG function: function code GR; Thermophilic glucose-6-phosphate isomerase and related metalloenzymes

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis oxdD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017774
- InterPro:   IPR006045
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00190 Cupin_1 [H]

EC number: =4.1.1.2 [H]

Molecular weight: Translated: 43479; Mature: 43479

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNKQIPQPIRGEKGAETKIPHNVERDRQNPDMLVPPETDHGTVPNMKFSFSDVHNRLE
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEECCCCCCCCCCCCCEEEHHHHHHHHH
KGGYAREVTVRELPISDKLASVNMRLKPGAIRELHWHKEAEWAYMLYGKARITSVDQDGR
HCCCEEEEEEEECCCCCCCEEEEEEECCCCHHHHHCCCCCCEEEEEECCEEEEECCCCHH
NFIEDVKEGDLWYFPSGLPHSIQALEDGCEFLLVFDDGSFSENSTFQVTDWLAHTPDEVI
HHHHHHHCCCEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCEEEEHHHHCCCHHHE
AANFGISKDVVASLPVEEKYIFQEAIPGCLEKDKVESPNGTVPLSFSYNLLEQEPIISIG
EECCCCCHHHHHHCCCHHHHHHHHHCCCHHCCCCCCCCCCCEEEEEECCCCCCCCEEEEC
GKVWIADSTNFKASKTIASALVEVEPGGIRELHWHPNTDEWQYYISGQAKMTVFAADGHA
CEEEEECCCCCCHHHHHHHHHEEECCCCEEEEEECCCCCCEEEEEECCEEEEEEEECCCE
RTFNYQAGDVGYVPFAMGHYVQNTGDEPLRFLEIFKDDHYADVSLNQWLALVPEELVRQH
EEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCEECCCHHHHHHHCHHHHHHHH
LDVGSEFTKMLSKEKHPVVKFDKK
HCCCHHHHHHHHCCCCCCEEECCC
>Mature Secondary Structure
MEKNKQIPQPIRGEKGAETKIPHNVERDRQNPDMLVPPETDHGTVPNMKFSFSDVHNRLE
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEECCCCCCCCCCCCCEEEHHHHHHHHH
KGGYAREVTVRELPISDKLASVNMRLKPGAIRELHWHKEAEWAYMLYGKARITSVDQDGR
HCCCEEEEEEEECCCCCCCEEEEEEECCCCHHHHHCCCCCCEEEEEECCEEEEECCCCHH
NFIEDVKEGDLWYFPSGLPHSIQALEDGCEFLLVFDDGSFSENSTFQVTDWLAHTPDEVI
HHHHHHHCCCEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCEEEEHHHHCCCHHHE
AANFGISKDVVASLPVEEKYIFQEAIPGCLEKDKVESPNGTVPLSFSYNLLEQEPIISIG
EECCCCCHHHHHHCCCHHHHHHHHHCCCHHCCCCCCCCCCCEEEEEECCCCCCCCEEEEC
GKVWIADSTNFKASKTIASALVEVEPGGIRELHWHPNTDEWQYYISGQAKMTVFAADGHA
CEEEEECCCCCCHHHHHHHHHEEECCCCEEEEEECCCCCCEEEEEECCEEEEEEEECCCE
RTFNYQAGDVGYVPFAMGHYVQNTGDEPLRFLEIFKDDHYADVSLNQWLALVPEELVRQH
EEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCEECCCHHHHHHHCHHHHHHHH
LDVGSEFTKMLSKEKHPVVKFDKK
HCCCHHHHHHHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377; 10960116; 11546787; 12056897 [H]