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The map label for this gene is yvaA [H]

Identifier: 52787261

GI number: 52787261

Start: 3416251

End: 3417300

Strand: Direct

Name: yvaA [H]

Synonym: BLi03572

Alternate gene names: 52787261

Gene position: 3416251-3417300 (Clockwise)

Preceding gene: 52787256

Following gene: 52787266

Centisome position: 80.9

GC content: 51.05

Gene sequence:

>1050_bases
ATGGTGGACAAGGTTCGCACAGGGATATTAGGATACGGTTTGTCCGGTTCGGTGTTTCATGCGCCTTTATTATCAGTGTT
AGAAGATTATGAGATTCGAAAGGTTATGACTTCAAGGAAAGAACAAGTCAAACAGGACCTCCCCGAAGCAGAAGCGGTCA
GTACGATCGAAGACATCACAAAAGATCCGGACATTGATCTCGTCATCGTGACCACGCCGAGCGGCCTTCATTACGAAATG
GCGAAAGAGTGCATCCGCGCCGGAAAGCATGTCGTTCTTGAAAAGCCGATGACAGCAACAGCGGAAGAAGCGGAAGAGCT
CATTAATGCCGCGAAAGAAAAAGGCGTGCTTCTCAGCGTGTATCACAACCGAAGATGGGATAACGACTTTTTGACGATCA
AACAGCTCATCAAAGAGGGGCGCCTTGGAGAGGTCAACACATTCCACGCCTCCTACGACCGGTTCCGGCCGAATGTCAGA
CAGCGCTGGAGAGAACAGAAAGGACCGGGGTCAGGTGCACTGTACGATTTAGGTTCACACTTGATCGATCAGGCGCTTCA
TTTATTCGGCATGCCGAACGGCGTCACCGCTCAAGTGACCGCTCAGAGAGCCAATGCGGAAACAGACGATTACTTCCATG
TCATCCTTCACTATGATCAGCGCCAAGTGATTCTCCACTCGGGCTCGATTGTTCCGGCCAACGGCCCCCGCTACCAAATC
CACGGCTCAAAAGGAAGCTTTATTAAATACGGAATCGACGGCCAGGAGGATGCACTCAGAGCGGGTCATAAACCTGCAGG
CGATGAGTGGGGAGCCGATCAACCCGAATATTACGGGGAACTGGCCACAGTCGAAGGCGACGAGATCAGGAAGGAAACCG
TGGAAACGCTCCCGGGTTCATACTTAACTTATTACAAGCAGCTTGCTTCAAGTATTCTAGAAGGCGGCAGCTTGCCTGTC
ACGGCGGAAGAAGGACGCGACGTCATCCGAATCATCGAAGCTGCGCAAAAAAGCAGCGAAACGAATCAAACGGTGTTCTT
AAACAAATAA

Upstream 100 bases:

>100_bases
TAATTTAAAAAGGCCTTTAGGTTTGTTCCTATAGGCAAACAGGGTAAAATAAAGGGGTGTTGATTACATATTAAAAACAA
ACATGGGAGAGGAGAATGAA

Downstream 100 bases:

>100_bases
AACAAAACCGCGGATATGATCCGCGGTTTTTTCAAAAAGTCCTGCCCAATTCTTTGGCTCGGACAATCGCATTTTGTTTT
ATTTCTTCAGCTTTATCAGG

Product: YvaA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MVDKVRTGILGYGLSGSVFHAPLLSVLEDYEIRKVMTSRKEQVKQDLPEAEAVSTIEDITKDPDIDLVIVTTPSGLHYEM
AKECIRAGKHVVLEKPMTATAEEAEELINAAKEKGVLLSVYHNRRWDNDFLTIKQLIKEGRLGEVNTFHASYDRFRPNVR
QRWREQKGPGSGALYDLGSHLIDQALHLFGMPNGVTAQVTAQRANAETDDYFHVILHYDQRQVILHSGSIVPANGPRYQI
HGSKGSFIKYGIDGQEDALRAGHKPAGDEWGADQPEYYGELATVEGDEIRKETVETLPGSYLTYYKQLASSILEGGSLPV
TAEEGRDVIRIIEAAQKSSETNQTVFLNK

Sequences:

>Translated_349_residues
MVDKVRTGILGYGLSGSVFHAPLLSVLEDYEIRKVMTSRKEQVKQDLPEAEAVSTIEDITKDPDIDLVIVTTPSGLHYEM
AKECIRAGKHVVLEKPMTATAEEAEELINAAKEKGVLLSVYHNRRWDNDFLTIKQLIKEGRLGEVNTFHASYDRFRPNVR
QRWREQKGPGSGALYDLGSHLIDQALHLFGMPNGVTAQVTAQRANAETDDYFHVILHYDQRQVILHSGSIVPANGPRYQI
HGSKGSFIKYGIDGQEDALRAGHKPAGDEWGADQPEYYGELATVEGDEIRKETVETLPGSYLTYYKQLASSILEGGSLPV
TAEEGRDVIRIIEAAQKSSETNQTVFLNK
>Mature_349_residues
MVDKVRTGILGYGLSGSVFHAPLLSVLEDYEIRKVMTSRKEQVKQDLPEAEAVSTIEDITKDPDIDLVIVTTPSGLHYEM
AKECIRAGKHVVLEKPMTATAEEAEELINAAKEKGVLLSVYHNRRWDNDFLTIKQLIKEGRLGEVNTFHASYDRFRPNVR
QRWREQKGPGSGALYDLGSHLIDQALHLFGMPNGVTAQVTAQRANAETDDYFHVILHYDQRQVILHSGSIVPANGPRYQI
HGSKGSFIKYGIDGQEDALRAGHKPAGDEWGADQPEYYGELATVEGDEIRKETVETLPGSYLTYYKQLASSILEGGSLPV
TAEEGRDVIRIIEAAQKSSETNQTVFLNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=222, Percent_Identity=26.5765765765766, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI87081947, Length=347, Percent_Identity=44.956772334294, Blast_Score=310, Evalue=8e-86,
Organism=Escherichia coli, GI1789848, Length=332, Percent_Identity=33.1325301204819, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI1787574, Length=197, Percent_Identity=29.9492385786802, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082405, Length=271, Percent_Identity=28.4132841328413, Blast_Score=79, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6323975, Length=235, Percent_Identity=23.8297872340426, Blast_Score=69, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24581117, Length=217, Percent_Identity=28.110599078341, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38865; Mature: 38865

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDKVRTGILGYGLSGSVFHAPLLSVLEDYEIRKVMTSRKEQVKQDLPEAEAVSTIEDIT
CCCCHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
KDPDIDLVIVTTPSGLHYEMAKECIRAGKHVVLEKPMTATAEEAEELINAAKEKGVLLSV
CCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCEEEEE
YHNRRWDNDFLTIKQLIKEGRLGEVNTFHASYDRFRPNVRQRWREQKGPGSGALYDLGSH
ECCCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHH
LIDQALHLFGMPNGVTAQVTAQRANAETDDYFHVILHYDQRQVILHSGSIVPANGPRYQI
HHHHHHHHHCCCCCCEEEEEEHHCCCCCCCEEEEEEEECCCEEEEECCCEEECCCCEEEE
HGSKGSFIKYGIDGQEDALRAGHKPAGDEWGADQPEYYGELATVEGDEIRKETVETLPGS
ECCCCCEEEECCCCCHHHHHCCCCCCCCCCCCCCCHHHCCEEECCCHHHHHHHHHHCCCH
YLTYYKQLASSILEGGSLPVTAEEGRDVIRIIEAAQKSSETNQTVFLNK
HHHHHHHHHHHHHCCCCCCEEHHHCHHHHHHHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MVDKVRTGILGYGLSGSVFHAPLLSVLEDYEIRKVMTSRKEQVKQDLPEAEAVSTIEDIT
CCCCHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
KDPDIDLVIVTTPSGLHYEMAKECIRAGKHVVLEKPMTATAEEAEELINAAKEKGVLLSV
CCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCEEEEE
YHNRRWDNDFLTIKQLIKEGRLGEVNTFHASYDRFRPNVRQRWREQKGPGSGALYDLGSH
ECCCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHH
LIDQALHLFGMPNGVTAQVTAQRANAETDDYFHVILHYDQRQVILHSGSIVPANGPRYQI
HHHHHHHHHCCCCCCEEEEEEHHCCCCCCCEEEEEEEECCCEEEEECCCEEECCCCEEEE
HGSKGSFIKYGIDGQEDALRAGHKPAGDEWGADQPEYYGELATVEGDEIRKETVETLPGS
ECCCCCEEEECCCCCHHHHHCCCCCCCCCCCCCCCHHHCCEEECCCHHHHHHHHHHCCCH
YLTYYKQLASSILEGGSLPVTAEEGRDVIRIIEAAQKSSETNQTVFLNK
HHHHHHHHHHHHHCCCCCCEEHHHCHHHHHHHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]