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The map label for this gene is yurI [H]

Identifier: 52787133

GI number: 52787133

Start: 3285857

End: 3286669

Strand: Direct

Name: yurI [H]

Synonym: BLi03441

Alternate gene names: 52787133

Gene position: 3285857-3286669 (Clockwise)

Preceding gene: 52787132

Following gene: 52787158

Centisome position: 77.82

GC content: 51.66

Gene sequence:

>813_bases
ATGAACCGAAAGTGTGTCATTCCGTTTATTTTGATGTTGTCGGCGATGTGCGCGCCCGCCCAAAACGCAGAGGCCTTCCA
GCTGTTTTCCTTACCCGTACAATCCTCGGCTCCGGCAGATTACTACGAACAGGCGCAGGGCAAAACAGGTGAAGCTTTAA
AACGAGCGCTTCACGACACAATCGACGATCATCGAGAGCTGTCTTACAGCGAGGTATGGGAAGCGCTGAAAGCAACGGAT
GAAGATCCGGCCAATCGAAACAACGTGATACTGTTATATTCCAGAGAGTCGCGCTCTAAACAGGCGAACGGGGGGCAAAC
GGGCGATTGGAACCGCGAGCACGTATGGGCAAAATCGCACGGTGATTTCGGGACAAGCAAAGGACCCGGGACAGATTTGC
ATCACCTCAGGCCCAGCGATGTGCAAGTTAACGCCGCCCGCGGAAACCTTGATTTTGACGAAGGCGGCAGCCCCTATCCC
GGAGCTCCCGGAAACTACTATGACGGCGATTCCTGGGAACCTGACAAAAGCATCAAAGGCGATGTCGCCAGAATGATTTT
CTATATGGCGGTCCGCTATGAAGGGGACGACGGTCATCCGGATCTTGAAATGAACAATACAACGAACAACGGGTCTAAAC
CGTACCACGGAAAAATGTCGGTTTTATTGAAATGGCATCATGAAGACCCTGTCGATGCCCTCGAAAGAAAGCGGAACGAT
ATCATCTATCAGCAATACCAGCATAACCGCAATCCGTTCATTGATCACCCTGAATGGGCGGAGGATATTTGGGGCTCGGG
CGTTTTGAATTGA

Upstream 100 bases:

>100_bases
GCTTCATTTACAAGACCGTAAGAAAACCGTAATCAAAATGATATTTCCTTTTCATGAAAAGATTGGATAATGAAAGAAAT
GAAAAGGAGGGGATCGATAG

Downstream 100 bases:

>100_bases
ACAAAAAAAGCGCCTGCTCAGCGCTCTTTTTTCAAACCTCTGTTTTTTTGTTCAGCACCGATTTTTTATCCATAAAACGA
AAGAAATCTGCTGTGCAGCA

Product: YurI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MNRKCVIPFILMLSAMCAPAQNAEAFQLFSLPVQSSAPADYYEQAQGKTGEALKRALHDTIDDHRELSYSEVWEALKATD
EDPANRNNVILLYSRESRSKQANGGQTGDWNREHVWAKSHGDFGTSKGPGTDLHHLRPSDVQVNAARGNLDFDEGGSPYP
GAPGNYYDGDSWEPDKSIKGDVARMIFYMAVRYEGDDGHPDLEMNNTTNNGSKPYHGKMSVLLKWHHEDPVDALERKRND
IIYQQYQHNRNPFIDHPEWAEDIWGSGVLN

Sequences:

>Translated_270_residues
MNRKCVIPFILMLSAMCAPAQNAEAFQLFSLPVQSSAPADYYEQAQGKTGEALKRALHDTIDDHRELSYSEVWEALKATD
EDPANRNNVILLYSRESRSKQANGGQTGDWNREHVWAKSHGDFGTSKGPGTDLHHLRPSDVQVNAARGNLDFDEGGSPYP
GAPGNYYDGDSWEPDKSIKGDVARMIFYMAVRYEGDDGHPDLEMNNTTNNGSKPYHGKMSVLLKWHHEDPVDALERKRND
IIYQQYQHNRNPFIDHPEWAEDIWGSGVLN
>Mature_270_residues
MNRKCVIPFILMLSAMCAPAQNAEAFQLFSLPVQSSAPADYYEQAQGKTGEALKRALHDTIDDHRELSYSEVWEALKATD
EDPANRNNVILLYSRESRSKQANGGQTGDWNREHVWAKSHGDFGTSKGPGTDLHHLRPSDVQVNAARGNLDFDEGGSPYP
GAPGNYYDGDSWEPDKSIKGDVARMIFYMAVRYEGDDGHPDLEMNNTTNNGSKPYHGKMSVLLKWHHEDPVDALERKRND
IIYQQYQHNRNPFIDHPEWAEDIWGSGVLN

Specific function: Mg(2+)-activated ribonuclease which hydrolyzes RNA apparently nonspecifically into oligonucleotides with 5'-terminal phosphate [H]

COG id: COG2356

COG function: function code L; Endonuclease I

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007346 [H]

Pfam domain/function: PF04231 Endonuclease_1 [H]

EC number: NA

Molecular weight: Translated: 30461; Mature: 30461

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKCVIPFILMLSAMCAPAQNAEAFQLFSLPVQSSAPADYYEQAQGKTGEALKRALHDT
CCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHH
IDDHRELSYSEVWEALKATDEDPANRNNVILLYSRESRSKQANGGQTGDWNREHVWAKSH
HHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCC
GDFGTSKGPGTDLHHLRPSDVQVNAARGNLDFDEGGSPYPGAPGNYYDGDSWEPDKSIKG
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
DVARMIFYMAVRYEGDDGHPDLEMNNTTNNGSKPYHGKMSVLLKWHHEDPVDALERKRND
HHHHHHHHHHHEECCCCCCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH
IIYQQYQHNRNPFIDHPEWAEDIWGSGVLN
HHHHHHHCCCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MNRKCVIPFILMLSAMCAPAQNAEAFQLFSLPVQSSAPADYYEQAQGKTGEALKRALHDT
CCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHH
IDDHRELSYSEVWEALKATDEDPANRNNVILLYSRESRSKQANGGQTGDWNREHVWAKSH
HHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCC
GDFGTSKGPGTDLHHLRPSDVQVNAARGNLDFDEGGSPYPGAPGNYYDGDSWEPDKSIKG
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
DVARMIFYMAVRYEGDDGHPDLEMNNTTNNGSKPYHGKMSVLLKWHHEDPVDALERKRND
HHHHHHHHHHHEECCCCCCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH
IIYQQYQHNRNPFIDHPEWAEDIWGSGVLN
HHHHHHHCCCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]