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The map label for this gene is dnaB [H]

Identifier: 52786777

GI number: 52786777

Start: 2932002

End: 2933426

Strand: Reverse

Name: dnaB [H]

Synonym: BLi03047

Alternate gene names: 52786777

Gene position: 2933426-2932002 (Counterclockwise)

Preceding gene: 52786778

Following gene: 52786776

Centisome position: 69.47

GC content: 47.86

Gene sequence:

>1425_bases
ATGAGTAATTATTGGAAAGATTTGCTTCCTGTCGATCCGTATGTTGTCAAAAGCAGCGGATTGCTGCAGGATTTGGACCG
GCAAATTGTCACGCTATTGTATCAGCCTTTAATCGGCTCTTTTTCGTTCAGCTTGTTTCTCACGCTGTGGGGAGAGCTGG
AGCAAAACAGAGTCTGGGGAAAAAGCTCGACTCACAGACAGCTGATGGCGGCGATGCAGACCAGCCTGAAGACGATCCAC
TCAGAAAAGGAAAAGCTTGAGGGGATCGGACTGTTGAAAACTTATATAAAAGAAACGGAACACGAACGTTTGTTTATATA
TGAATTGATTCCGCCGCTCAGACCGGACGAGTTCTTTCAGGACGGCATGCTGAATGTCTTCTTGTACAACCGCGTCGGAA
AGGCGAGGTTTCAGCAGCTGAAAGAATATTTTTCCCACCCGTCTGTTCCTGAAGAAGCACGGGACATCACCCGTTCTTTC
AATGAAGTTTTTGCATCTGTCCAGCCGAGCGAATGGAAGATGTCCGACGATATGATCGAAGCGATGGAGCTTCGCGAAGA
TCATGAATGGATGAAAGAAGGGAATAGCCAACCGGCAGCAGTCACAGACGGCGCCTTTGACTTTCAACTGTTTCTCGCCG
GTTTATCTGACACGCTTATCCCGAGAAAAGCGCTGACAGACCAAGTGAAGGAAACGATTAAAAAGCTGGCCTTTCTCTAC
GGTATCGAACCGCTTCAGATGCAAAACGTCGTCATGTCAGCCGTTGACGAACACGATATGATCACGACAGAGGCGCTCAG
AAAAGCGGCGAGCGACTGGTATCAGATCGAGCGCGGCGGCCCGCTTCCGGAACTCGTCGACAAAGTGCAGCCGATGAATC
TCCGCGAACAGCCGAATCAACAGTCGTCCACAAACGCCAAGGAAGACAATTTGATCGCTTTGCTTGAGCAAGTATCGCCA
AGAAAGCTGCTGCAGGATATTGGCGGCGGAGCGGAACCATCCAAAGCCGATCTGAAAATTATAGAAGAAATTATGCTTGA
CCAAAAATTAGAGCCCGGCGTCATCAATGTTCTGATTTATTATGTCATGCTGAAAACCGATATGAAGCTTTCGAAAAATT
ACACGCAAAAAATCGCTTCCCACTGGGCCAGAAAAAAAGTTCGTACGGTTAGAGAGGCCATGAAGCTTGCGAAAGAAGAA
AACCGCCAATATCTTGAATGGGCGGAAGGGAAGAAAAAGACTTCCCGGAACAAGAAAGTCATCAGAGAAGAAAAGCTGCC
TGATTGGCTTCGGGAAAGTGACGATGCTGACAGCAAACCGCTGGAAACAGAGCAGGCTGGTCCTGCAACCAGAGAAGGCT
TTGACCAGCAGAAACAGAAGCTGCTCGAAGAAGTAAAAAAACTGAAAAACCATTCCGCTCTTTAA

Upstream 100 bases:

>100_bases
CCAGCTCTTTTCTCATGACAAAAACACAGTCGTGTGACATGAAGGCCTGAAAAAGGTGTAAAATGAGGACAAGAAACAAA
GTGGAAGGTTGACAAAAGAT

Downstream 100 bases:

>100_bases
TGTGAGGTGACAAGATGATGGAGCCGATTAAACGCGCTTTGCAAGGCGTGACGACGAGACCCGATTTTAAAAAACGCCTT
GAAGATATGAAAGAAAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MSNYWKDLLPVDPYVVKSSGLLQDLDRQIVTLLYQPLIGSFSFSLFLTLWGELEQNRVWGKSSTHRQLMAAMQTSLKTIH
SEKEKLEGIGLLKTYIKETEHERLFIYELIPPLRPDEFFQDGMLNVFLYNRVGKARFQQLKEYFSHPSVPEEARDITRSF
NEVFASVQPSEWKMSDDMIEAMELREDHEWMKEGNSQPAAVTDGAFDFQLFLAGLSDTLIPRKALTDQVKETIKKLAFLY
GIEPLQMQNVVMSAVDEHDMITTEALRKAASDWYQIERGGPLPELVDKVQPMNLREQPNQQSSTNAKEDNLIALLEQVSP
RKLLQDIGGGAEPSKADLKIIEEIMLDQKLEPGVINVLIYYVMLKTDMKLSKNYTQKIASHWARKKVRTVREAMKLAKEE
NRQYLEWAEGKKKTSRNKKVIREEKLPDWLRESDDADSKPLETEQAGPATREGFDQQKQKLLEEVKKLKNHSAL

Sequences:

>Translated_474_residues
MSNYWKDLLPVDPYVVKSSGLLQDLDRQIVTLLYQPLIGSFSFSLFLTLWGELEQNRVWGKSSTHRQLMAAMQTSLKTIH
SEKEKLEGIGLLKTYIKETEHERLFIYELIPPLRPDEFFQDGMLNVFLYNRVGKARFQQLKEYFSHPSVPEEARDITRSF
NEVFASVQPSEWKMSDDMIEAMELREDHEWMKEGNSQPAAVTDGAFDFQLFLAGLSDTLIPRKALTDQVKETIKKLAFLY
GIEPLQMQNVVMSAVDEHDMITTEALRKAASDWYQIERGGPLPELVDKVQPMNLREQPNQQSSTNAKEDNLIALLEQVSP
RKLLQDIGGGAEPSKADLKIIEEIMLDQKLEPGVINVLIYYVMLKTDMKLSKNYTQKIASHWARKKVRTVREAMKLAKEE
NRQYLEWAEGKKKTSRNKKVIREEKLPDWLRESDDADSKPLETEQAGPATREGFDQQKQKLLEEVKKLKNHSAL
>Mature_473_residues
SNYWKDLLPVDPYVVKSSGLLQDLDRQIVTLLYQPLIGSFSFSLFLTLWGELEQNRVWGKSSTHRQLMAAMQTSLKTIHS
EKEKLEGIGLLKTYIKETEHERLFIYELIPPLRPDEFFQDGMLNVFLYNRVGKARFQQLKEYFSHPSVPEEARDITRSFN
EVFASVQPSEWKMSDDMIEAMELREDHEWMKEGNSQPAAVTDGAFDFQLFLAGLSDTLIPRKALTDQVKETIKKLAFLYG
IEPLQMQNVVMSAVDEHDMITTEALRKAASDWYQIERGGPLPELVDKVQPMNLREQPNQQSSTNAKEDNLIALLEQVSPR
KLLQDIGGGAEPSKADLKIIEEIMLDQKLEPGVINVLIYYVMLKTDMKLSKNYTQKIASHWARKKVRTVREAMKLAKEEN
RQYLEWAEGKKKTSRNKKVIREEKLPDWLRESDDADSKPLETEQAGPATREGFDQQKQKLLEEVKKLKNHSAL

Specific function: Probable component of primosome involved in the initiation of DNA replication. It is essential for both replication initiation and membrane attachment of the origin region of the chromosome and plasmid pUB110 [H]

COG id: COG3611

COG function: function code L; Replication initiation/membrane attachment protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006343 [H]

Pfam domain/function: PF07261 DnaB_2 [H]

EC number: NA

Molecular weight: Translated: 54723; Mature: 54592

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNYWKDLLPVDPYVVKSSGLLQDLDRQIVTLLYQPLIGSFSFSLFLTLWGELEQNRVWG
CCCHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KSSTHRQLMAAMQTSLKTIHSEKEKLEGIGLLKTYIKETEHERLFIYELIPPLRPDEFFQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH
DGMLNVFLYNRVGKARFQQLKEYFSHPSVPEEARDITRSFNEVFASVQPSEWKMSDDMIE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
AMELREDHEWMKEGNSQPAAVTDGAFDFQLFLAGLSDTLIPRKALTDQVKETIKKLAFLY
HHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GIEPLQMQNVVMSAVDEHDMITTEALRKAASDWYQIERGGPLPELVDKVQPMNLREQPNQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCC
QSSTNAKEDNLIALLEQVSPRKLLQDIGGGAEPSKADLKIIEEIMLDQKLEPGVINVLIY
CCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
YVMLKTDMKLSKNYTQKIASHWARKKVRTVREAMKLAKEENRQYLEWAEGKKKTSRNKKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
IREEKLPDWLRESDDADSKPLETEQAGPATREGFDQQKQKLLEEVKKLKNHSAL
HHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SNYWKDLLPVDPYVVKSSGLLQDLDRQIVTLLYQPLIGSFSFSLFLTLWGELEQNRVWG
CCHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KSSTHRQLMAAMQTSLKTIHSEKEKLEGIGLLKTYIKETEHERLFIYELIPPLRPDEFFQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH
DGMLNVFLYNRVGKARFQQLKEYFSHPSVPEEARDITRSFNEVFASVQPSEWKMSDDMIE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
AMELREDHEWMKEGNSQPAAVTDGAFDFQLFLAGLSDTLIPRKALTDQVKETIKKLAFLY
HHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GIEPLQMQNVVMSAVDEHDMITTEALRKAASDWYQIERGGPLPELVDKVQPMNLREQPNQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCC
QSSTNAKEDNLIALLEQVSPRKLLQDIGGGAEPSKADLKIIEEIMLDQKLEPGVINVLIY
CCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
YVMLKTDMKLSKNYTQKIASHWARKKVRTVREAMKLAKEENRQYLEWAEGKKKTSRNKKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
IREEKLPDWLRESDDADSKPLETEQAGPATREGFDQQKQKLLEEVKKLKNHSAL
HHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3027697; 3027671; 8969504; 9387221; 9384377 [H]