| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is thrS [H]
Identifier: 52786773
GI number: 52786773
Start: 2927187
End: 2929118
Strand: Reverse
Name: thrS [H]
Synonym: BLi03043
Alternate gene names: 52786773
Gene position: 2929118-2927187 (Counterclockwise)
Preceding gene: 52786774
Following gene: 52786771
Centisome position: 69.37
GC content: 50.36
Gene sequence:
>1932_bases ATGTCAGATATGGTAAAAATCAAATTTCCTGACGGAGCGGTTAAGGAGTTTGCAAAAGCGACGACAACAGAAGATATCGC GGCATCAATCAGTCCCGGCTTAAAGAAAAAAGCGATAGCGGGGAAATTAAACGGCAAAGAAATCGATCTGCGCGCACCGA TCCTTGAGGACGGCGCCATCGAAATCATTACAGAAGGCAGCGAAGAAGCGCTTGAAATCATGCGCCACAGTACTGCACAC TTAATGGCCCAGGCGATCAAGCGCCTGTATAAAAACGTGAAGCTCGGGGTCGGCCCGGTTATCGAAAACGGCTTCTACTA CGACGTGGATTTGGAAGAAGCGCTGACTCCGGAAGACCTTCCGAAGATTGAGAAGGAAATGAAAAAAATCGTCGGGGAAA ATCTGCCGATCGTAAGAAAAGAAGTCAGCCGAGAGGAAGCCAGAGCCCTGTTTGCCGAAATCGGCGATGATCTGAAATTG GAACTGCTTGATGCGATTCCGGAAGGCGAGACGGTATCGATCTATGAGCAGGGCGAATTCTTCGATCTGTGCCGCGGTGT TCACGTTCCTTCGACGGGCAAAATCAAGGAGTTCAAGCTGCTGAGCCTTGCGGGGGCATACTGGCGCGGAGACAGCAACA ACAAGATGCTCCAGCGCATCTATGGGACGGCTTTCTTCAAAAAAGCCGAGCTTGAAGAGCATCTTCGCCTCCTTGAGGAA GCGAAAGAACGCGACCACAGAAAACTCGGAAAAGAACTGAAGCTGTTCGCCAATTCGCAAAAAGTCGGCCAGGGTCTGCC GCTTTGGCTGCCAAAGGGTGCGACCATCAGACGCGTCATCGAGCGCTATATCGTTGACAAAGAGCTCGCGCTCGGCTATG AGCACGTGTACACCCCTGTCCTCGGCAGCAAAGACCTGTATGAAACATCAGGCCACTGGGATCATTATCAAGACGGCATG TTCCCGCCGATGGAGATGGACAATGAAACACTTGTGCTTCGTCCGATGAACTGTCCGCACCATATGATGATTTATAAAAA CGACATTCACAGCTACCGTGAGCTTCCGATCCGGATCGCCGAGCTCGGAACGATGCACCGCTATGAAATGTCAGGGGCTC TTTCAGGGCTGCAGCGCGTCCGCGGAATGACGCTGAATGACGCCCACATTTTCGTCCGTCCAGATCAAATCAAAGACGAG TTCATTCGAACTGTCCGCCTGATTCAGGATGTATACGAAGACTTCGGACTGGAAGAGTATTCATTCCGCTTGTCTTACCG CGACCCTGAAGATACAGAGAAATACTACGATGACGATGAAATGTGGAACAAAGCGCAATCGATGCTGAAGGAGGCGATGG ACGAGATCGGCCATGATTATTACGAAGCTGAAGGGGAAGCGGCCTTCTACGGACCGAAGCTTGACGTTCAGGTCAAAACA GCAATCGGCAAAGAGGAAACTCTGTCAACTGTTCAGCTGGACTTCCTTCTTCCTGAAAAATTCGATCTGACATATGTCGG GGAAGACGGAAAACCTCATCGTCCGGTCGTCATTCACAGAGGTGTCGTATCGACAATGGAACGCTTTGTCGCTTTCTTAA TTGAGGAGCATAAAGGCGCATTGCCGACATGGCTTGCCCCTGTTCAGTTCCAGGTCATCCCTGTATCGCCGTCTGTGCAT CTTGACTACGCCAAAAAAGTTCAAGAGCGCCTGCAGCGTGAAGGGCTTCGCGTTGAAGTCGATACCCGCGACGAGAAAAT CGGCTATAAAATCCGTGAAGCGCAGATGCAAAAAATCCCTTACATGCTTGTCGTCGGCGACCAGGAAGTTGAAAACGAAG CCGTCAACGTCCGCAAATACGGAGAGCAAAAATCAGAAACGGTTGCAATTGCAGACTTTATCAAAAAAGCCGTTGCTGAA GCAAAGAAATAA
Upstream 100 bases:
>100_bases TCGGGAAAAAGGGTGGAACCACGAATTCCGTTTATTAATCCTCGTCCCTTTCTTAGGGGGACGGGGATTTTTTATTTTGT AAAAAAAAGGAGTGACTAGG
Downstream 100 bases:
>100_bases ACAAGAAAAAAGCATGATTCCCGCCCGGGAGTCATGCTTTTTTGCTTAGCTTGTCCGCTGCTTGTCCGCGGAGGATATCG AACAGTTCGCTTAAATGGCT
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 643; Mature: 642
Protein sequence:
>643_residues MSDMVKIKFPDGAVKEFAKATTTEDIAASISPGLKKKAIAGKLNGKEIDLRAPILEDGAIEIITEGSEEALEIMRHSTAH LMAQAIKRLYKNVKLGVGPVIENGFYYDVDLEEALTPEDLPKIEKEMKKIVGENLPIVRKEVSREEARALFAEIGDDLKL ELLDAIPEGETVSIYEQGEFFDLCRGVHVPSTGKIKEFKLLSLAGAYWRGDSNNKMLQRIYGTAFFKKAELEEHLRLLEE AKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKELALGYEHVYTPVLGSKDLYETSGHWDHYQDGM FPPMEMDNETLVLRPMNCPHHMMIYKNDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDE FIRTVRLIQDVYEDFGLEEYSFRLSYRDPEDTEKYYDDDEMWNKAQSMLKEAMDEIGHDYYEAEGEAAFYGPKLDVQVKT AIGKEETLSTVQLDFLLPEKFDLTYVGEDGKPHRPVVIHRGVVSTMERFVAFLIEEHKGALPTWLAPVQFQVIPVSPSVH LDYAKKVQERLQREGLRVEVDTRDEKIGYKIREAQMQKIPYMLVVGDQEVENEAVNVRKYGEQKSETVAIADFIKKAVAE AKK
Sequences:
>Translated_643_residues MSDMVKIKFPDGAVKEFAKATTTEDIAASISPGLKKKAIAGKLNGKEIDLRAPILEDGAIEIITEGSEEALEIMRHSTAH LMAQAIKRLYKNVKLGVGPVIENGFYYDVDLEEALTPEDLPKIEKEMKKIVGENLPIVRKEVSREEARALFAEIGDDLKL ELLDAIPEGETVSIYEQGEFFDLCRGVHVPSTGKIKEFKLLSLAGAYWRGDSNNKMLQRIYGTAFFKKAELEEHLRLLEE AKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKELALGYEHVYTPVLGSKDLYETSGHWDHYQDGM FPPMEMDNETLVLRPMNCPHHMMIYKNDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDE FIRTVRLIQDVYEDFGLEEYSFRLSYRDPEDTEKYYDDDEMWNKAQSMLKEAMDEIGHDYYEAEGEAAFYGPKLDVQVKT AIGKEETLSTVQLDFLLPEKFDLTYVGEDGKPHRPVVIHRGVVSTMERFVAFLIEEHKGALPTWLAPVQFQVIPVSPSVH LDYAKKVQERLQREGLRVEVDTRDEKIGYKIREAQMQKIPYMLVVGDQEVENEAVNVRKYGEQKSETVAIADFIKKAVAE AKK >Mature_642_residues SDMVKIKFPDGAVKEFAKATTTEDIAASISPGLKKKAIAGKLNGKEIDLRAPILEDGAIEIITEGSEEALEIMRHSTAHL MAQAIKRLYKNVKLGVGPVIENGFYYDVDLEEALTPEDLPKIEKEMKKIVGENLPIVRKEVSREEARALFAEIGDDLKLE LLDAIPEGETVSIYEQGEFFDLCRGVHVPSTGKIKEFKLLSLAGAYWRGDSNNKMLQRIYGTAFFKKAELEEHLRLLEEA KERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKELALGYEHVYTPVLGSKDLYETSGHWDHYQDGMF PPMEMDNETLVLRPMNCPHHMMIYKNDIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEF IRTVRLIQDVYEDFGLEEYSFRLSYRDPEDTEKYYDDDEMWNKAQSMLKEAMDEIGHDYYEAEGEAAFYGPKLDVQVKTA IGKEETLSTVQLDFLLPEKFDLTYVGEDGKPHRPVVIHRGVVSTMERFVAFLIEEHKGALPTWLAPVQFQVIPVSPSVHL DYAKKVQERLQREGLRVEVDTRDEKIGYKIREAQMQKIPYMLVVGDQEVENEAVNVRKYGEQKSETVAIADFIKKAVAEA KK
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38202255, Length=637, Percent_Identity=38.61852433281, Blast_Score=443, Evalue=1e-124, Organism=Homo sapiens, GI38570111, Length=621, Percent_Identity=38.3252818035427, Blast_Score=438, Evalue=1e-123, Organism=Homo sapiens, GI20070344, Length=634, Percent_Identity=35.6466876971609, Blast_Score=376, Evalue=1e-104, Organism=Escherichia coli, GI1788013, Length=640, Percent_Identity=43.4375, Blast_Score=548, Evalue=1e-157, Organism=Caenorhabditis elegans, GI71984184, Length=639, Percent_Identity=37.4021909233177, Blast_Score=432, Evalue=1e-121, Organism=Caenorhabditis elegans, GI71984192, Length=639, Percent_Identity=37.4021909233177, Blast_Score=431, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6322112, Length=656, Percent_Identity=35.8231707317073, Blast_Score=412, Evalue=1e-115, Organism=Saccharomyces cerevisiae, GI6322654, Length=392, Percent_Identity=36.4795918367347, Blast_Score=266, Evalue=8e-72, Organism=Drosophila melanogaster, GI24583842, Length=635, Percent_Identity=37.1653543307087, Blast_Score=440, Evalue=1e-123, Organism=Drosophila melanogaster, GI28574141, Length=635, Percent_Identity=37.1653543307087, Blast_Score=440, Evalue=1e-123, Organism=Drosophila melanogaster, GI24583839, Length=635, Percent_Identity=37.1653543307087, Blast_Score=440, Evalue=1e-123,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR012675 - InterPro: IPR004095 - InterPro: IPR012676 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF02824 TGS; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 73536; Mature: 73405
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDMVKIKFPDGAVKEFAKATTTEDIAASISPGLKKKAIAGKLNGKEIDLRAPILEDGAI CCCCEEEECCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCCCEEEEECCCCCCCCE EIITEGSEEALEIMRHSTAHLMAQAIKRLYKNVKLGVGPVIENGFYYDVDLEEALTPEDL EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEECHHHCCCCCCH PKIEKEMKKIVGENLPIVRKEVSREEARALFAEIGDDLKLELLDAIPEGETVSIYEQGEF HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCEEEEEECCCH FDLCRGVHVPSTGKIKEFKLLSLAGAYWRGDSNNKMLQRIYGTAFFKKAELEEHLRLLEE HHHHCCCCCCCCCCCHHEEHHHHHCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKELALGYEHVYTPV HHHHHHHHHHHHHHHHCCCHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHCCHHHHHCCC LGSKDLYETSGHWDHYQDGMFPPMEMDNETLVLRPMNCPHHMMIYKNDIHSYRELPIRIA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECHHHHHHHCCEEEE ELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYEDFGLEEY HHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEE SFRLSYRDPEDTEKYYDDDEMWNKAQSMLKEAMDEIGHDYYEAEGEAAFYGPKLDVQVKT EEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCEEEEE AIGKEETLSTVQLDFLLPEKFDLTYVGEDGKPHRPVVIHRGVVSTMERFVAFLIEEHKGA CCCCHHHHHEEEEEEECCCCCCEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCC LPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQREGLRVEVDTRDEKIGYKIREAQMQKIP CCCEECCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCC YMLVVGDQEVENEAVNVRKYGEQKSETVAIADFIKKAVAEAKK EEEEECCCHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDMVKIKFPDGAVKEFAKATTTEDIAASISPGLKKKAIAGKLNGKEIDLRAPILEDGAI CCCEEEECCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCCCEEEEECCCCCCCCE EIITEGSEEALEIMRHSTAHLMAQAIKRLYKNVKLGVGPVIENGFYYDVDLEEALTPEDL EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEECHHHCCCCCCH PKIEKEMKKIVGENLPIVRKEVSREEARALFAEIGDDLKLELLDAIPEGETVSIYEQGEF HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCEEEEEECCCH FDLCRGVHVPSTGKIKEFKLLSLAGAYWRGDSNNKMLQRIYGTAFFKKAELEEHLRLLEE HHHHCCCCCCCCCCCHHEEHHHHHCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AKERDHRKLGKELKLFANSQKVGQGLPLWLPKGATIRRVIERYIVDKELALGYEHVYTPV HHHHHHHHHHHHHHHHCCCHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHCCHHHHHCCC LGSKDLYETSGHWDHYQDGMFPPMEMDNETLVLRPMNCPHHMMIYKNDIHSYRELPIRIA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECHHHHHHHCCEEEE ELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFIRTVRLIQDVYEDFGLEEY HHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEE SFRLSYRDPEDTEKYYDDDEMWNKAQSMLKEAMDEIGHDYYEAEGEAAFYGPKLDVQVKT EEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCEEEEE AIGKEETLSTVQLDFLLPEKFDLTYVGEDGKPHRPVVIHRGVVSTMERFVAFLIEEHKGA CCCCHHHHHEEEEEEECCCCCCEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCC LPTWLAPVQFQVIPVSPSVHLDYAKKVQERLQREGLRVEVDTRDEKIGYKIREAQMQKIP CCCEECCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCC YMLVVGDQEVENEAVNVRKYGEQKSETVAIADFIKKAVAEAKK EEEEECCCHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2115870; 8969504; 9387221; 9384377; 3027671; 1379177 [H]