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The map label for this gene is ysdA [H]

Identifier: 52786762

GI number: 52786762

Start: 2918408

End: 2918671

Strand: Reverse

Name: ysdA [H]

Synonym: BLi03032

Alternate gene names: 52786762

Gene position: 2918671-2918408 (Counterclockwise)

Preceding gene: 52786763

Following gene: 52786760

Centisome position: 69.12

GC content: 47.35

Gene sequence:

>264_bases
TTGACTCTCATATGGATATACATGATCCTCATAAACGGATACGGTTTTTTCTTAATGAAAGCCGATAAGCAAAAAGCGGT
CAGAGGCAAATGGAGGGTGTCTGAGCGCCGCATCTGGCTCGTTGCGGCTGCTTTTGGCTCCGCAGGCGTCTGGTTCGGGA
TGATGCGGTTCAGACATAAGACAAAACACCTTTCCTTCAGGCTCGGCATTCCTTTTTTGCTCGGCGTGCAAGCTGTTTTG
ACCGGCTTTTATATGATGAATTAA

Upstream 100 bases:

>100_bases
CTCCGGCCTTTTTCTTTTGTTCTTCGAGCAGGATGTAAAACGATTCGGGGAGGCCGGCCGCAGCAGGCGCCCAAACCGAA
AAACAAGGGGAAATGAACAA

Downstream 100 bases:

>100_bases
AAAAGCAGACGAGGCTTTATTGCTCTTCTGCTTTTTTGTTTTTCCACTTTTGGATGTTCGAATCCCAGTCGATTTTGCAA
TCGGGATAGTGCTCTTTAAT

Product: YsdA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MTLIWIYMILINGYGFFLMKADKQKAVRGKWRVSERRIWLVAAAFGSAGVWFGMMRFRHKTKHLSFRLGIPFLLGVQAVL
TGFYMMN

Sequences:

>Translated_87_residues
MTLIWIYMILINGYGFFLMKADKQKAVRGKWRVSERRIWLVAAAFGSAGVWFGMMRFRHKTKHLSFRLGIPFLLGVQAVL
TGFYMMN
>Mature_86_residues
TLIWIYMILINGYGFFLMKADKQKAVRGKWRVSERRIWLVAAAFGSAGVWFGMMRFRHKTKHLSFRLGIPFLLGVQAVLT
GFYMMN

Specific function: Unknown

COG id: COG3326

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010718 [H]

Pfam domain/function: PF06961 DUF1294 [H]

EC number: NA

Molecular weight: Translated: 10179; Mature: 10047

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLIWIYMILINGYGFFLMKADKQKAVRGKWRVSERRIWLVAAAFGSAGVWFGMMRFRHK
CHHHHEEHHHHCCCCEEEEECCCCCHHCCCEEECCCEEEEEEEECCCCHHHHHHHHHHHH
TKHLSFRLGIPFLLGVQAVLTGFYMMN
HHCEEEEECCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLIWIYMILINGYGFFLMKADKQKAVRGKWRVSERRIWLVAAAFGSAGVWFGMMRFRHK
HHHHEEHHHHCCCCEEEEECCCCCHHCCCEEECCCEEEEEEEECCCCHHHHHHHHHHHH
TKHLSFRLGIPFLLGVQAVLTGFYMMN
HHCEEEEECCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]