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The map label for this gene is xkdE [H]

Identifier: 52786699

GI number: 52786699

Start: 2855873

End: 2856094

Strand: Reverse

Name: xkdE [H]

Synonym: BLi02967

Alternate gene names: 52786699

Gene position: 2856094-2855873 (Counterclockwise)

Preceding gene: 52786700

Following gene: 52786698

Centisome position: 67.64

GC content: 42.34

Gene sequence:

>222_bases
ATGGCTCAACAATCTGTGAAAGCCACCGTGTTCAAGGCAAATGCCCCAAGTGAAACGACCAAACAGATTTACGAAGATCA
ATTCGACTATAAAGGAAATGACATCATCGAGCCGCCTTATAGTTTGAAGGAATTGAAAAGCACCGCAGAGTATTCAACGA
TCCTGCAGCAGTGCATCCATGCCTATAAGACCAAATATTCTCGGTTTTTGGTTTTGATGTAG

Upstream 100 bases:

>100_bases
TCTTTCGGCCATCTGGTATGCCCTCGATGATTACGAGGTCACCGATCTGAAGGAGAAACCGAAAATCCGGCAGCGGCCAA
ATAGAGAGAGGAGGTAAAGC

Downstream 100 bases:

>100_bases
AGTACACCTTTGATATTAACGGAGATGATGTAAAACCTGGATTTTGCTTTTGGCAACAGGGGAACGAATGTCCACTTTTT
AAACTTACGAATTAATTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MAQQSVKATVFKANAPSETTKQIYEDQFDYKGNDIIEPPYSLKELKSTAEYSTILQQCIHAYKTKYSRFLVLM

Sequences:

>Translated_73_residues
MAQQSVKATVFKANAPSETTKQIYEDQFDYKGNDIIEPPYSLKELKSTAEYSTILQQCIHAYKTKYSRFLVLM
>Mature_72_residues
AQQSVKATVFKANAPSETTKQIYEDQFDYKGNDIIEPPYSLKELKSTAEYSTILQQCIHAYKTKYSRFLVLM

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR016753
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 8444; Mature: 8313

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQQSVKATVFKANAPSETTKQIYEDQFDYKGNDIIEPPYSLKELKSTAEYSTILQQCIH
CCCCCCHHHEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AYKTKYSRFLVLM
HHHHHHHHEEEEC
>Mature Secondary Structure 
AQQSVKATVFKANAPSETTKQIYEDQFDYKGNDIIEPPYSLKELKSTAEYSTILQQCIH
CCCCCHHHEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AYKTKYSRFLVLM
HHHHHHHHEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]