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The map label for this gene is yrrO [H]

Identifier: 52786596

GI number: 52786596

Start: 2750662

End: 2751930

Strand: Reverse

Name: yrrO [H]

Synonym: BLi02862

Alternate gene names: 52786596

Gene position: 2751930-2750662 (Counterclockwise)

Preceding gene: 52786597

Following gene: 52786595

Centisome position: 65.17

GC content: 47.36

Gene sequence:

>1269_bases
ATGTCTGCAGTAAAAGATAAAATTTCCAAAATCGTTAATGGAAAACGCGTCATTACGAAAAAGCCAGAACTTCTTGCTCC
GGCGGGGAATTTGGAAAAACTGAAAATCGCTGTCCACTATGGAGCAGACGCTGTATTTATCGGCGGACGTGAATATGGAC
TCCGCTCAAACGCAGATAACTTTTCAATTGAAGAAATGGCTGAAGGTGTCGAATTCGCGAAAAAATACGGCGCAAGAATT
TATGTCACGACAAACATTTTTGCGCATGAAGAAAATATCGACGGACTGGAAGACTATTTGCGCGATCTCGAGGGAGCAGG
CGTGTCAGGCATTATCGTCGCTGATCCCCTGATCATTGAAACGTGCCGCAGGGTTGCGCCGAAGCTGGAAGTGCATTTGA
GCACACAGCAGTCCCTTTCAAACTGGAAAGCCGTTCAGTTCTGGAAGGAAGAAGGCCTTGAGCGGGTTGTGCTCGCACGT
GAAACGAGCGCACTTGAAATCAGGGAAATGAAAGAAAAAGTGGATATTGAAATCGAAACGTTTATTCACGGTGCGATGTG
TATCGCTTATTCCGGCCGCTGCGTGCTCAGCAACCATATGACGGCAAGGGACTCCAACCGCGGAGGCTGCTGCCAGTCAT
GCCGCTGGGACTATGATTTGTATCAGACGGACGGGACGAATGCACTGCCGCTATATGAAGAAGGCGATGCTCCATTTGCG
ATGAGCCCGAAAGATCTGAAGCTGGTCGAATCGATACCGCAAATGATTGAAATGGGCATCGACAGCCTGAAAATCGAAGG
CCGGATGAAATCGATCCACTACATTGCGACAGTCGTCAGTGTGTACAGAAAAGTGATCGATGCTTATTGCGCTGATCCTG
AAAACTTCGTCATCAAAGAAGAATGGCTGAAAGAACTGGACAAATGCGCCAATAGAGACACGGCGCCTGCTTTCTTTGAA
GGAACGCCAGGATATGAAGAGCAGATGTTCGGCGTCCACGGCAAAAAGACAACATACGACTTTGTCGGACTTGTCCTTGA
CTATGATGAAGAGACAAAAATGGTCACGCTCCAGCAGCGGAACTTCTTTAAATCCGGAGATGAAGTCGAATTTTTCGGTC
CGGAAATCGAAAATTTCACATGCAAAATTGACACGATTTGGGACGAAAAAGGCAATGTGCTTGACGCAGCCCGCCATCCC
CTGCAGATCGTCAAATTTAGAGTGGACAACAAGATTTATCCTAGCAACATGATGAGAAAGGGGCAGTAA

Upstream 100 bases:

>100_bases
AACAATGGATCGAGCGGATCGAACAGCTGCAGCCTGCAAACCGCAGCATTGATACCGGATTCTTTTTCAAAGAAACAGTA
TACTAAAAGGAGGGATAGCC

Downstream 100 bases:

>100_bases
TGGCATGGGGAAAAAACCGGTAGTTATCGGCATAGCGGGAGGCTCCGGATCAGGAAAAACGAGCGTCACCAGATCCATTT
ATGAACAGTTTAAAGGTCAT

Product: YrrO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSAVKDKISKIVNGKRVITKKPELLAPAGNLEKLKIAVHYGADAVFIGGREYGLRSNADNFSIEEMAEGVEFAKKYGARI
YVTTNIFAHEENIDGLEDYLRDLEGAGVSGIIVADPLIIETCRRVAPKLEVHLSTQQSLSNWKAVQFWKEEGLERVVLAR
ETSALEIREMKEKVDIEIETFIHGAMCIAYSGRCVLSNHMTARDSNRGGCCQSCRWDYDLYQTDGTNALPLYEEGDAPFA
MSPKDLKLVESIPQMIEMGIDSLKIEGRMKSIHYIATVVSVYRKVIDAYCADPENFVIKEEWLKELDKCANRDTAPAFFE
GTPGYEEQMFGVHGKKTTYDFVGLVLDYDEETKMVTLQQRNFFKSGDEVEFFGPEIENFTCKIDTIWDEKGNVLDAARHP
LQIVKFRVDNKIYPSNMMRKGQ

Sequences:

>Translated_422_residues
MSAVKDKISKIVNGKRVITKKPELLAPAGNLEKLKIAVHYGADAVFIGGREYGLRSNADNFSIEEMAEGVEFAKKYGARI
YVTTNIFAHEENIDGLEDYLRDLEGAGVSGIIVADPLIIETCRRVAPKLEVHLSTQQSLSNWKAVQFWKEEGLERVVLAR
ETSALEIREMKEKVDIEIETFIHGAMCIAYSGRCVLSNHMTARDSNRGGCCQSCRWDYDLYQTDGTNALPLYEEGDAPFA
MSPKDLKLVESIPQMIEMGIDSLKIEGRMKSIHYIATVVSVYRKVIDAYCADPENFVIKEEWLKELDKCANRDTAPAFFE
GTPGYEEQMFGVHGKKTTYDFVGLVLDYDEETKMVTLQQRNFFKSGDEVEFFGPEIENFTCKIDTIWDEKGNVLDAARHP
LQIVKFRVDNKIYPSNMMRKGQ
>Mature_421_residues
SAVKDKISKIVNGKRVITKKPELLAPAGNLEKLKIAVHYGADAVFIGGREYGLRSNADNFSIEEMAEGVEFAKKYGARIY
VTTNIFAHEENIDGLEDYLRDLEGAGVSGIIVADPLIIETCRRVAPKLEVHLSTQQSLSNWKAVQFWKEEGLERVVLARE
TSALEIREMKEKVDIEIETFIHGAMCIAYSGRCVLSNHMTARDSNRGGCCQSCRWDYDLYQTDGTNALPLYEEGDAPFAM
SPKDLKLVESIPQMIEMGIDSLKIEGRMKSIHYIATVVSVYRKVIDAYCADPENFVIKEEWLKELDKCANRDTAPAFFEG
TPGYEEQMFGVHGKKTTYDFVGLVLDYDEETKMVTLQQRNFFKSGDEVEFFGPEIENFTCKIDTIWDEKGNVLDAARHPL
QIVKFRVDNKIYPSNMMRKGQ

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=426, Percent_Identity=33.0985915492958, Blast_Score=211, Evalue=6e-56,
Organism=Escherichia coli, GI87081910, Length=272, Percent_Identity=38.2352941176471, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1789548, Length=318, Percent_Identity=33.0188679245283, Blast_Score=158, Evalue=7e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 47773; Mature: 47642

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVKDKISKIVNGKRVITKKPELLAPAGNLEKLKIAVHYGADAVFIGGREYGLRSNADN
CCHHHHHHHHHHCCCEEEECCCCEECCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCCC
FSIEEMAEGVEFAKKYGARIYVTTNIFAHEENIDGLEDYLRDLEGAGVSGIIVADPLIIE
CCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECHHHHH
TCRRVAPKLEVHLSTQQSLSNWKAVQFWKEEGLERVVLARETSALEIREMKEKVDIEIET
HHHHHCCCEEEEECCHHHHHCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCEEEEH
FIHGAMCIAYSGRCVLSNHMTARDSNRGGCCQSCRWDYDLYQTDGTNALPLYEEGDAPFA
HHHHEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCC
MSPKDLKLVESIPQMIEMGIDSLKIEGRMKSIHYIATVVSVYRKVIDAYCADPENFVIKE
CCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHH
EWLKELDKCANRDTAPAFFEGTPGYEEQMFGVHGKKTTYDFVGLVLDYDEETKMVTLQQR
HHHHHHHHHCCCCCCCCEECCCCCHHHHHCCCCCCCCEEEEEEEEEECCCCCCEEEEECC
NFFKSGDEVEFFGPEIENFTCKIDTIWDEKGNVLDAARHPLQIVKFRVDNKIYPSNMMRK
CCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCHHHHCCCEEEEEEEECCEECCHHHHCC
GQ
CC
>Mature Secondary Structure 
SAVKDKISKIVNGKRVITKKPELLAPAGNLEKLKIAVHYGADAVFIGGREYGLRSNADN
CHHHHHHHHHHCCCEEEECCCCEECCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCCC
FSIEEMAEGVEFAKKYGARIYVTTNIFAHEENIDGLEDYLRDLEGAGVSGIIVADPLIIE
CCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECHHHHH
TCRRVAPKLEVHLSTQQSLSNWKAVQFWKEEGLERVVLARETSALEIREMKEKVDIEIET
HHHHHCCCEEEEECCHHHHHCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCEEEEH
FIHGAMCIAYSGRCVLSNHMTARDSNRGGCCQSCRWDYDLYQTDGTNALPLYEEGDAPFA
HHHHEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCC
MSPKDLKLVESIPQMIEMGIDSLKIEGRMKSIHYIATVVSVYRKVIDAYCADPENFVIKE
CCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHH
EWLKELDKCANRDTAPAFFEGTPGYEEQMFGVHGKKTTYDFVGLVLDYDEETKMVTLQQR
HHHHHHHHHCCCCCCCCEECCCCCHHHHHCCCCCCCCEEEEEEEEEECCCCCCEEEEECC
NFFKSGDEVEFFGPEIENFTCKIDTIWDEKGNVLDAARHPLQIVKFRVDNKIYPSNMMRK
CCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCHHHHCCCEEEEEEEECCEECCHHHHCC
GQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]