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The map label for this gene is ycgT [C]

Identifier: 52786545

GI number: 52786545

Start: 2693834

End: 2694883

Strand: Reverse

Name: ycgT [C]

Synonym: BLi02810

Alternate gene names: 52786545

Gene position: 2694883-2693834 (Counterclockwise)

Preceding gene: 52786555

Following gene: 52786541

Centisome position: 63.82

GC content: 51.24

Gene sequence:

>1050_bases
ATGAGCAGAAATGAATTGTTTGATGTGACCGTTATCGGCGGAGGTCCGGCTGGGTTATATTCCGCCTTTTACAGCGGACT
GCGGGGAATGAAGGCAAAGATTATTGAATATCAGCCGATGCTGGGCGGAAAGGTTCACGTTTATCCTGAAAAAATGATCT
GGGATGTCGGGGGATTAACGCCTATTTCCGGAGCCAAGCTGATAGAACAGCTGGTGCAGCAGGGGTTAACGTTTCATCCT
GAAGTGCTGCTGAATGAGAAAGTCGAATCGATTGCCCGCAATGAAGAAGGGTTGTTTGAATTACATACGGCTGCCTCAGG
TGTGCATCTTTCCAAGACGGTCATCGTTGCCGTGGGCGGCGGCATCCTCAATCCGCAAAAGCTTCAGATAGAAGGCGCAG
AGCGTTTTGAAGTGTCCAATCTGAATTATACGGTTAAGTCACTGCAGCATTTTAAAGATAAAACGGTCATTGTATCCGGC
GGCGGCAATTCGGCTGTCGATTGGGCCAACGAACTCGAACCTGTAGCGAAAAAGGTCTACCTCGCTTACCGCAAAGATGC
GCTCAGCGGGCATGAGGCCCAGGTGGATCAGCTTCTGAACAGCTCGGTGAGCTGCTTCTTTCATACAGAGATTACCAAGC
TGATCGCTTCGGAAGATCATGAGGTGATCGAACGGGTCGAGCTCACGAACGCTCAAACAGGTGAGGTGATGGAACTGCCT
GTCGACGAGGTGGTTATCAACCACGGATATGAACGCGACACCTCACTTCTGGAGAACAGCCGCCTTGATGTTACCCGAGT
GGATGACTATTATATTGCAGGTACTTCCAACTGCCAGTCTTCCGTGCCCGGTCTGTATGCGGCGGGGGATATTGTGCATT
ACGAAGGCAAGCTGCACCTGATCGCCGGAGCGTTTCAAGATGCGGCAAACGCGGTCAACAGCGCCAAGCGATTTATCGAT
CCCGAAGCGCACAAGAGTGCGATGGTGTCGTCGCATAATGAGGTTTTCAAAGAGCGCAACCGCGAGCTTGTCAAGAAGAT
GTTCGTGTAG

Upstream 100 bases:

>100_bases
GGATTGTAAAAATGGAGCAATCAAAGTACACTTAATGATAATGATAATCATTTGCGTTTGGTGTTTGTGAACTCATGACA
TATACCGGGAGTGAAGAGCG

Downstream 100 bases:

>100_bases
ATAAGGAATATTTTTCACCCGCGGGAGCGGCTGATTCGTCAAAGAGGATCTTGGACATATGGCAAGATCCTCTTTTTATT
TAAACCAGCCTTTTTCCTTT

Product: YcgT

Products: NA

Alternate protein names: FNR 1; Fd-NADP+ reductase 1

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MSRNELFDVTVIGGGPAGLYSAFYSGLRGMKAKIIEYQPMLGGKVHVYPEKMIWDVGGLTPISGAKLIEQLVQQGLTFHP
EVLLNEKVESIARNEEGLFELHTAASGVHLSKTVIVAVGGGILNPQKLQIEGAERFEVSNLNYTVKSLQHFKDKTVIVSG
GGNSAVDWANELEPVAKKVYLAYRKDALSGHEAQVDQLLNSSVSCFFHTEITKLIASEDHEVIERVELTNAQTGEVMELP
VDEVVINHGYERDTSLLENSRLDVTRVDDYYIAGTSNCQSSVPGLYAAGDIVHYEGKLHLIAGAFQDAANAVNSAKRFID
PEAHKSAMVSSHNEVFKERNRELVKKMFV

Sequences:

>Translated_349_residues
MSRNELFDVTVIGGGPAGLYSAFYSGLRGMKAKIIEYQPMLGGKVHVYPEKMIWDVGGLTPISGAKLIEQLVQQGLTFHP
EVLLNEKVESIARNEEGLFELHTAASGVHLSKTVIVAVGGGILNPQKLQIEGAERFEVSNLNYTVKSLQHFKDKTVIVSG
GGNSAVDWANELEPVAKKVYLAYRKDALSGHEAQVDQLLNSSVSCFFHTEITKLIASEDHEVIERVELTNAQTGEVMELP
VDEVVINHGYERDTSLLENSRLDVTRVDDYYIAGTSNCQSSVPGLYAAGDIVHYEGKLHLIAGAFQDAANAVNSAKRFID
PEAHKSAMVSSHNEVFKERNRELVKKMFV
>Mature_348_residues
SRNELFDVTVIGGGPAGLYSAFYSGLRGMKAKIIEYQPMLGGKVHVYPEKMIWDVGGLTPISGAKLIEQLVQQGLTFHPE
VLLNEKVESIARNEEGLFELHTAASGVHLSKTVIVAVGGGILNPQKLQIEGAERFEVSNLNYTVKSLQHFKDKTVIVSGG
GNSAVDWANELEPVAKKVYLAYRKDALSGHEAQVDQLLNSSVSCFFHTEITKLIASEDHEVIERVELTNAQTGEVMELPV
DEVVINHGYERDTSLLENSRLDVTRVDDYYIAGTSNCQSSVPGLYAAGDIVHYEGKLHLIAGAFQDAANAVNSAKRFIDP
EAHKSAMVSSHNEVFKERNRELVKKMFV

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ferredoxin--NADP reductase type 2 family

Homologues:

Organism=Escherichia coli, GI1787114, Length=322, Percent_Identity=23.6024844720497, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6320560, Length=296, Percent_Identity=25.3378378378378, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): FENR1_BACLD (Q65GY3)

Other databases:

- EMBL:   CP000002
- EMBL:   AE017333
- RefSeq:   YP_079953.1
- RefSeq:   YP_092374.1
- ProteinModelPortal:   Q65GY3
- STRING:   Q65GY3
- EnsemblBacteria:   EBBACT00000058018
- EnsemblBacteria:   EBBACT00000058693
- GeneID:   3028262
- GeneID:   3097980
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi02810
- KEGG:   bli:BL02042
- NMPDR:   fig|279010.5.peg.3102
- eggNOG:   COG0492
- GeneTree:   EBGT00050000000432
- HOGENOM:   HBG669726
- OMA:   KKVYVTY
- ProtClustDB:   CLSK904552
- BioCyc:   BLIC279010-1:BLI02810-MONOMER
- BioCyc:   BLIC279010:BL02042-MONOMER
- HAMAP:   MF_01685
- InterPro:   IPR013027
- InterPro:   IPR022890
- InterPro:   IPR000103
- PRINTS:   PR00368
- PRINTS:   PR00469

Pfam domain/function: PF07992 Pyr_redox_2

EC number: =1.18.1.2

Molecular weight: Translated: 38343; Mature: 38212

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: BINDING 36-36 BINDING 44-44 BINDING 48-48 BINDING 88-88 BINDING 123-123 BINDING 290-290 BINDING 331-331

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNELFDVTVIGGGPAGLYSAFYSGLRGMKAKIIEYQPMLGGKVHVYPEKMIWDVGGLT
CCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHEEEEECCCCCCEEEECCHHHEEECCCCC
PISGAKLIEQLVQQGLTFHPEVLLNEKVESIARNEEGLFELHTAASGVHLSKTVIVAVGG
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHCCCCEEEEEEEEEECC
GILNPQKLQIEGAERFEVSNLNYTVKSLQHFKDKTVIVSGGGNSAVDWANELEPVAKKVY
CCCCCCEEEECCCCEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
LAYRKDALSGHEAQVDQLLNSSVSCFFHTEITKLIASEDHEVIERVELTNAQTGEVMELP
HHHHHHHCCCCHHHHHHHHCCCCEEEEHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECC
VDEVVINHGYERDTSLLENSRLDVTRVDDYYIAGTSNCQSSVPGLYAAGDIVHYEGKLHL
HHHHHHCCCCCHHHHHHHCCCCCEEECCCEEEECCCCCCCCCCCCEECCCEEEECCEEEE
IAGAFQDAANAVNSAKRFIDPEAHKSAMVSSHNEVFKERNRELVKKMFV
EEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRNELFDVTVIGGGPAGLYSAFYSGLRGMKAKIIEYQPMLGGKVHVYPEKMIWDVGGLT
CCCCEEEEEEECCCHHHHHHHHHHHHCCCHHEEEEECCCCCCEEEECCHHHEEECCCCC
PISGAKLIEQLVQQGLTFHPEVLLNEKVESIARNEEGLFELHTAASGVHLSKTVIVAVGG
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHCCCCEEEEEEEEEECC
GILNPQKLQIEGAERFEVSNLNYTVKSLQHFKDKTVIVSGGGNSAVDWANELEPVAKKVY
CCCCCCEEEECCCCEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
LAYRKDALSGHEAQVDQLLNSSVSCFFHTEITKLIASEDHEVIERVELTNAQTGEVMELP
HHHHHHHCCCCHHHHHHHHCCCCEEEEHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECC
VDEVVINHGYERDTSLLENSRLDVTRVDDYYIAGTSNCQSSVPGLYAAGDIVHYEGKLHL
HHHHHHCCCCCHHHHHHHCCCCCEEECCCEEEECCCCCCCCCCCCEECCCEEEECCEEEE
IAGAFQDAANAVNSAKRFIDPEAHKSAMVSSHNEVFKERNRELVKKMFV
EEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA