| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is ywqJ [H]
Identifier: 52786443
GI number: 52786443
Start: 2603479
End: 2605488
Strand: Reverse
Name: ywqJ [H]
Synonym: BLi02707
Alternate gene names: 52786443
Gene position: 2605488-2603479 (Counterclockwise)
Preceding gene: 52786444
Following gene: 52786442
Centisome position: 61.7
GC content: 44.98
Gene sequence:
>2010_bases ATGAAAGTATTTGAAGCGCATTCTTTAATTGAAGCAGCGAATAACCGCAAGAAACAATACGAAACCTTTGAGGATCAACT GCAAACGCTCAAAAAAGCGTTTCTCGGAGTCGCCGATTTAGGTGATGATTTTCAGGGGAAAGGTGCGGATAACATTAAAG ACTTCTACAAGGGACAGGCCGAGATCGTTGACAGCTGGTTAAAGCTTGTTGAAGCGCAGATTGCTTTTTTTAATGGTGTA TCAGGTGACATAAAAGACAAAAAGCTGTCCGATTCTTATGTGGAAGTCTCTTTTTTGGATCATGAACTGAAAAACGCTGA TTTGAAAGCGACGGAAATCGTCTCGGGGCTCAAGCTGGAAATGGATAAAATCATCGCAAGCATCAGCGATATCGTTGATT TGGACAATTGGACGCTTGACGATTATATTGATAAAATGTCTAAAGCGCAAACAACTCGGCAAAACACCATCGACGCTGTG AATAAACTGGATGAATCGCTCAAGACCGAATACACAAACTTACAAGCGCTCGACAGCGCCGTGCTCGGCAAATATTCCGG GCTGATGGAAGCTACAAGTCATGGAAAAACCGCCTCACCGATGTATTTTAGCTTGAAATCGTTCCACTCAAGCGAGATCT ATAAAAATACGATAGAAGTCGAAAATCAAGCCGCCAATTATATTGAATTCAAAAATGAACAGGCAGAAGCGCGCAGGCTT CAAGAAAAACAAGAAGAAGAAGCGAACAAGCCTTGGGATTTAAAAGCGCTTGACGCTGCCGGAACATTTGTCGGAGAAGT CAGCGGGTATTATGATTATAAGAGAGCCGCTGAAGGCGTCGACCCGGTCACAGGAGAAAAGCTGACAGACGGCCAGCGTG TCGCCGCCGGAGCAATGGCGGCAGCAGGATTTATTCCGATCGTAGGGTGGGCAGGCCGAGCCTTCAAAGGCGGAAAAGCC ATTTATAAAACAGGAAAAGGACTCATCGCCGCTGATCACGCGCTTGACGCCTACAAAGCCTCAAAAACGTTGAACGTCTT GAAAATGACGGAAATGGGCGCCTACGGCCTTGTCGCTTCAAATGGGTTCTCAGAAGCCGTCACGGGCAAGGACATGTTTG GAAACAAAGTTTCTGAAGAGAGGCGGAAACAAGGCCTGATCGAAGCCACCTTGAGCCTCGTCGGTGCAGGTGCTGTCGCA AAAACGGCAAACCACGGCGCTCAAACATTGGCCAAAACGGCCGGCAAAAACATTCCGCTCGCCAAATCGCCAAAAGCAGC TCTGGTGCAAAAAGGAAACAACATCCTTGAAAAGGTGAAATCCTTCCAAGTCCCGACAAACGTCCGCGTCTACGTCGAAC AGCCTGCCTCCGCAACAGGCCACCGCATCGGCACCCCAATTGTCCGCGTGAATGTTGAAAAAACGCCGGTGAAAGAGCTT GGAATTGTGAAGATGGTGAGTGGTGGGGGGAACGTCAGTAAGGGAGCCAGGACTGGTAGTAAAATAGATGTTGGAAAAGC TGATTTAGGTGTTCTGCGCCAAAAATGGAATGTTCCTAAAACTGACACTGTTGCGGTTGGAAAGACAGATGTGGAAGGTT TGGAAAATTTAGTATTTGAGGGTGGATCCCCTAAAGTTAGAAAAGAAGCCGGGCTTCCCGATTTAGACTCAGTAATGCCA GATAGACCTATAAAATCTCCAGGAAAAATCGCAAGTGCAACAAGACATGCTGAAGAAGGCGTGTTAAATGATTTTATAAG CAAAGTAGAAGCTTTAGGAAAAAATCCTGCTGAAATAACAGGAACATTAAAAATTCACCAATCTAATCCTAAAGGGGTTT GTCCAACCTGTATTCAAGGACTAAATAATCCGAATGTACCAGCTGGAGTATTTAAGCAATTTAGCGAGATGTTTCCTAAT TTGACGATAGAAGTAACTTCTGAGACTATTCAAGGAATCAAGCCAAACGGAAGATTGAATTTAGTTATTAAAAATGGTGA ATATATTTAA
Upstream 100 bases:
>100_bases ACACAAAAACATAAAGGATACGAAGGAAAATGTCGATTTGCTGAAAGAGCAGGACAAAGCAATCGCCAGAAAATAGCCTG AGGTTAGAGAGGACAATTCA
Downstream 100 bases:
>100_bases TTGAGGAGTGTAGTATATGTTTCAAGAATGGGAAGAATTGAATGATGATTTAAAATCTGCATATTATTTAGGACTTTGTG AAGCAATAGTTCCTACATTA
Product: YwqJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 669; Mature: 669
Protein sequence:
>669_residues MKVFEAHSLIEAANNRKKQYETFEDQLQTLKKAFLGVADLGDDFQGKGADNIKDFYKGQAEIVDSWLKLVEAQIAFFNGV SGDIKDKKLSDSYVEVSFLDHELKNADLKATEIVSGLKLEMDKIIASISDIVDLDNWTLDDYIDKMSKAQTTRQNTIDAV NKLDESLKTEYTNLQALDSAVLGKYSGLMEATSHGKTASPMYFSLKSFHSSEIYKNTIEVENQAANYIEFKNEQAEARRL QEKQEEEANKPWDLKALDAAGTFVGEVSGYYDYKRAAEGVDPVTGEKLTDGQRVAAGAMAAAGFIPIVGWAGRAFKGGKA IYKTGKGLIAADHALDAYKASKTLNVLKMTEMGAYGLVASNGFSEAVTGKDMFGNKVSEERRKQGLIEATLSLVGAGAVA KTANHGAQTLAKTAGKNIPLAKSPKAALVQKGNNILEKVKSFQVPTNVRVYVEQPASATGHRIGTPIVRVNVEKTPVKEL GIVKMVSGGGNVSKGARTGSKIDVGKADLGVLRQKWNVPKTDTVAVGKTDVEGLENLVFEGGSPKVRKEAGLPDLDSVMP DRPIKSPGKIASATRHAEEGVLNDFISKVEALGKNPAEITGTLKIHQSNPKGVCPTCIQGLNNPNVPAGVFKQFSEMFPN LTIEVTSETIQGIKPNGRLNLVIKNGEYI
Sequences:
>Translated_669_residues MKVFEAHSLIEAANNRKKQYETFEDQLQTLKKAFLGVADLGDDFQGKGADNIKDFYKGQAEIVDSWLKLVEAQIAFFNGV SGDIKDKKLSDSYVEVSFLDHELKNADLKATEIVSGLKLEMDKIIASISDIVDLDNWTLDDYIDKMSKAQTTRQNTIDAV NKLDESLKTEYTNLQALDSAVLGKYSGLMEATSHGKTASPMYFSLKSFHSSEIYKNTIEVENQAANYIEFKNEQAEARRL QEKQEEEANKPWDLKALDAAGTFVGEVSGYYDYKRAAEGVDPVTGEKLTDGQRVAAGAMAAAGFIPIVGWAGRAFKGGKA IYKTGKGLIAADHALDAYKASKTLNVLKMTEMGAYGLVASNGFSEAVTGKDMFGNKVSEERRKQGLIEATLSLVGAGAVA KTANHGAQTLAKTAGKNIPLAKSPKAALVQKGNNILEKVKSFQVPTNVRVYVEQPASATGHRIGTPIVRVNVEKTPVKEL GIVKMVSGGGNVSKGARTGSKIDVGKADLGVLRQKWNVPKTDTVAVGKTDVEGLENLVFEGGSPKVRKEAGLPDLDSVMP DRPIKSPGKIASATRHAEEGVLNDFISKVEALGKNPAEITGTLKIHQSNPKGVCPTCIQGLNNPNVPAGVFKQFSEMFPN LTIEVTSETIQGIKPNGRLNLVIKNGEYI >Mature_669_residues MKVFEAHSLIEAANNRKKQYETFEDQLQTLKKAFLGVADLGDDFQGKGADNIKDFYKGQAEIVDSWLKLVEAQIAFFNGV SGDIKDKKLSDSYVEVSFLDHELKNADLKATEIVSGLKLEMDKIIASISDIVDLDNWTLDDYIDKMSKAQTTRQNTIDAV NKLDESLKTEYTNLQALDSAVLGKYSGLMEATSHGKTASPMYFSLKSFHSSEIYKNTIEVENQAANYIEFKNEQAEARRL QEKQEEEANKPWDLKALDAAGTFVGEVSGYYDYKRAAEGVDPVTGEKLTDGQRVAAGAMAAAGFIPIVGWAGRAFKGGKA IYKTGKGLIAADHALDAYKASKTLNVLKMTEMGAYGLVASNGFSEAVTGKDMFGNKVSEERRKQGLIEATLSLVGAGAVA KTANHGAQTLAKTAGKNIPLAKSPKAALVQKGNNILEKVKSFQVPTNVRVYVEQPASATGHRIGTPIVRVNVEKTPVKEL GIVKMVSGGGNVSKGARTGSKIDVGKADLGVLRQKWNVPKTDTVAVGKTDVEGLENLVFEGGSPKVRKEAGLPDLDSVMP DRPIKSPGKIASATRHAEEGVLNDFISKVEALGKNPAEITGTLKIHQSNPKGVCPTCIQGLNNPNVPAGVFKQFSEMFPN LTIEVTSETIQGIKPNGRLNLVIKNGEYI
Specific function: Unknown
COG id: COG5444
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0720 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006829 [H]
Pfam domain/function: PF04740 Transposase_30 [H]
EC number: NA
Molecular weight: Translated: 72239; Mature: 72239
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFEAHSLIEAANNRKKQYETFEDQLQTLKKAFLGVADLGDDFQGKGADNIKDFYKGQA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHH EIVDSWLKLVEAQIAFFNGVSGDIKDKKLSDSYVEVSFLDHELKNADLKATEIVSGLKLE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHH MDKIIASISDIVDLDNWTLDDYIDKMSKAQTTRQNTIDAVNKLDESLKTEYTNLQALDSA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGKYSGLMEATSHGKTASPMYFSLKSFHSSEIYKNTIEVENQAANYIEFKNEQAEARRL HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QEKQEEEANKPWDLKALDAAGTFVGEVSGYYDYKRAAEGVDPVTGEKLTDGQRVAAGAMA HHHHHHHCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH AAGFIPIVGWAGRAFKGGKAIYKTGKGLIAADHALDAYKASKTLNVLKMTEMGAYGLVAS HHCCHHHCCCCCCCCCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEC NGFSEAVTGKDMFGNKVSEERRKQGLIEATLSLVGAGAVAKTANHGAQTLAKTAGKNIPL CCCCHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHCCCCCCC AKSPKAALVQKGNNILEKVKSFQVPTNVRVYVEQPASATGHRIGTPIVRVNVEKTPVKEL CCCCHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHC GIVKMVSGGGNVSKGARTGSKIDVGKADLGVLRQKWNVPKTDTVAVGKTDVEGLENLVFE CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCC GGSPKVRKEAGLPDLDSVMPDRPIKSPGKIASATRHAEEGVLNDFISKVEALGKNPAEIT CCCCCHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE GTLKIHQSNPKGVCPTCIQGLNNPNVPAGVFKQFSEMFPNLTIEVTSETIQGIKPNGRLN EEEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCEEE LVIKNGEYI EEECCCCCC >Mature Secondary Structure MKVFEAHSLIEAANNRKKQYETFEDQLQTLKKAFLGVADLGDDFQGKGADNIKDFYKGQA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHH EIVDSWLKLVEAQIAFFNGVSGDIKDKKLSDSYVEVSFLDHELKNADLKATEIVSGLKLE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHH MDKIIASISDIVDLDNWTLDDYIDKMSKAQTTRQNTIDAVNKLDESLKTEYTNLQALDSA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGKYSGLMEATSHGKTASPMYFSLKSFHSSEIYKNTIEVENQAANYIEFKNEQAEARRL HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QEKQEEEANKPWDLKALDAAGTFVGEVSGYYDYKRAAEGVDPVTGEKLTDGQRVAAGAMA HHHHHHHCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH AAGFIPIVGWAGRAFKGGKAIYKTGKGLIAADHALDAYKASKTLNVLKMTEMGAYGLVAS HHCCHHHCCCCCCCCCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEC NGFSEAVTGKDMFGNKVSEERRKQGLIEATLSLVGAGAVAKTANHGAQTLAKTAGKNIPL CCCCHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHCCCCCCC AKSPKAALVQKGNNILEKVKSFQVPTNVRVYVEQPASATGHRIGTPIVRVNVEKTPVKEL CCCCHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHC GIVKMVSGGGNVSKGARTGSKIDVGKADLGVLRQKWNVPKTDTVAVGKTDVEGLENLVFE CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCC GGSPKVRKEAGLPDLDSVMPDRPIKSPGKIASATRHAEEGVLNDFISKVEALGKNPAEIT CCCCCHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE GTLKIHQSNPKGVCPTCIQGLNNPNVPAGVFKQFSEMFPNLTIEVTSETIQGIKPNGRLN EEEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCEEE LVIKNGEYI EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]