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The map label for this gene is ywqL [H]

Identifier: 52786435

GI number: 52786435

Start: 2598599

End: 2599042

Strand: Reverse

Name: ywqL [H]

Synonym: BLi02699

Alternate gene names: 52786435

Gene position: 2599042-2598599 (Counterclockwise)

Preceding gene: 52786436

Following gene: 52786434

Centisome position: 61.55

GC content: 39.64

Gene sequence:

>444_bases
ATGAACATCAACAATATACACGATTTTAATTTAAACCAAGAAAATGACTTCTTAACGATACAAACAAAACTAAAAAAACA
TATCAATCTAGAAAACCCCATCAGTAAAGACGCTCTGCAAACCTGTGCGGGGGTTGATTTAGCTTATTGGGAGAAAGATG
GTGAAGCATTTGGTGTCTGCAGCATCATCGTGCTGGATTTTCATACGAAGCGTGTCATTGAAAAAGTACATTGTGCAGGG
AAAATCGCCGTGCCTTATATCGCAGGGTTTCTTGCTTTTAGGGAGCTGCCGCTTATTATTAAGGCAGCTAAAAAGCTGAC
GATTGAACCGGATGTTTTTTTATTTGACGGGAATGGCTATCTCCATATTAACCATATTGGATTGCGACACATGCTGCGTT
TTTTCTCGAAAACCCAACGATCGGCATTGCGAAAACTTACTTGA

Upstream 100 bases:

>100_bases
TCCGGCATCGGAGTGATGTCCCGGTAATGAACTGAACAATTTAGATATGATCTAGATAAAGGCGTTCAAAAAAAGGCATG
TAGAAAGTTGGTTTTTAAAG

Downstream 100 bases:

>100_bases
AAATAAAACAAACTGATTTTGTGATGCCTGATAATAAATTCGGCGCTTATACAGATATTGTGATTGATGGCGAAGTCTAC
GGACGTGCGGTGCGGACAAG

Product: YwqL

Products: NA

Alternate protein names: Deoxyinosine 3'endonuclease; Deoxyribonuclease V; DNase V [H]

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNINNIHDFNLNQENDFLTIQTKLKKHINLENPISKDALQTCAGVDLAYWEKDGEAFGVCSIIVLDFHTKRVIEKVHCAG
KIAVPYIAGFLAFRELPLIIKAAKKLTIEPDVFLFDGNGYLHINHIGLRHMLRFFSKTQRSALRKLT

Sequences:

>Translated_147_residues
MNINNIHDFNLNQENDFLTIQTKLKKHINLENPISKDALQTCAGVDLAYWEKDGEAFGVCSIIVLDFHTKRVIEKVHCAG
KIAVPYIAGFLAFRELPLIIKAAKKLTIEPDVFLFDGNGYLHINHIGLRHMLRFFSKTQRSALRKLT
>Mature_147_residues
MNINNIHDFNLNQENDFLTIQTKLKKHINLENPISKDALQTCAGVDLAYWEKDGEAFGVCSIIVLDFHTKRVIEKVHCAG
KIAVPYIAGFLAFRELPLIIKAAKKLTIEPDVFLFDGNGYLHINHIGLRHMLRFFSKTQRSALRKLT

Specific function: Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA. Acts in DNA repair [H]

COG id: COG1515

COG function: function code L; Deoxyinosine 3'endonuclease (endonuclease V)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the endonuclease V family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007581 [H]

Pfam domain/function: PF04493 Endonuclease_5 [H]

EC number: =3.1.21.7 [H]

Molecular weight: Translated: 16777; Mature: 16777

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINNIHDFNLNQENDFLTIQTKLKKHINLENPISKDALQTCAGVDLAYWEKDGEAFGVC
CCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCHHHHHHHHCCEEEEEECCCCEEEEE
SIIVLDFHTKRVIEKVHCAGKIAVPYIAGFLAFRELPLIIKAAKKLTIEPDVFLFDGNGY
EEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCE
LHINHIGLRHMLRFFSKTQRSALRKLT
EEEEHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNINNIHDFNLNQENDFLTIQTKLKKHINLENPISKDALQTCAGVDLAYWEKDGEAFGVC
CCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCHHHHHHHHCCEEEEEECCCCEEEEE
SIIVLDFHTKRVIEKVHCAGKIAVPYIAGFLAFRELPLIIKAAKKLTIEPDVFLFDGNGY
EEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCE
LHINHIGLRHMLRFFSKTQRSALRKLT
EEEEHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA