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The map label for this gene is sodA [H]

Identifier: 52786415

GI number: 52786415

Start: 2583685

End: 2584293

Strand: Reverse

Name: sodA [H]

Synonym: BLi02679

Alternate gene names: 52786415

Gene position: 2584293-2583685 (Counterclockwise)

Preceding gene: 52786416

Following gene: 52786414

Centisome position: 61.2

GC content: 46.31

Gene sequence:

>609_bases
ATGGCTTACAAACTTCCAGAATTACCTTATGCTTACGATGCGTTAGAACCTCACATCGACAAAGAGACGATGAATATTCA
CCATACGAAGCACCATAACACATATGTTACAAAATTGAACGAAGCGGTGGCAGGCAAACAGGATCTTGAAAGCAAATCTG
TTGAAGAGCTTGTTGCAAACCTTGATGCAGTACCGGAAAACATCCGTACAGCTGTCCGCAACAATGGCGGAGGGCATGCC
AACCACTCATTGTTCTGGAAACTTCTTTCTCCAAACGGAGGAGGCGCTCCAACTGGTGAATTGGCAGAAGCCATCAACAG
CAAATTCGGCAGCTTCGATCAATTCAAAGAAGACTTTGCGGCTGCAGCAGCAGGCCGTTTCGGCTCCGGCTGGGCATGGC
TTGTTGTCAATAACGGAGAGCTTGAAATCACAAGCACGCCAAACCAAGATTCTCCTCTTTCAGAAGGCAAGACTCCTATC
TTAGGTCTTGATGTATGGGAGCACGCATACTACCTGAATTATCAAAACCGCCGTCCAGATTACATTAAAGCATTCTGGAA
CGTCGTTAACTGGGATGAAGTTGCACGCCTTTACAGCGAAGCAAAATAA

Upstream 100 bases:

>100_bases
CATTTCCATTGAAACAAGCCTTTTCTTTTGATAAATTGAAAGAGGAAAGGCTTGCTAAAGGCGGCATTTCAATACATACA
ATATTAAGGAGGAATTGATA

Downstream 100 bases:

>100_bases
TCCAGCTTGAGAAAAGAGGCCCGCGAGAAGCGGGCCTTTTTATGTTGTCCGCGAAGCGGAGCGTCTGCTGAAAGACCGGC
GAAAAGCCGGTCTGTTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: General stress protein 24; GSP24 [H]

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MAYKLPELPYAYDALEPHIDKETMNIHHTKHHNTYVTKLNEAVAGKQDLESKSVEELVANLDAVPENIRTAVRNNGGGHA
NHSLFWKLLSPNGGGAPTGELAEAINSKFGSFDQFKEDFAAAAAGRFGSGWAWLVVNNGELEITSTPNQDSPLSEGKTPI
LGLDVWEHAYYLNYQNRRPDYIKAFWNVVNWDEVARLYSEAK

Sequences:

>Translated_202_residues
MAYKLPELPYAYDALEPHIDKETMNIHHTKHHNTYVTKLNEAVAGKQDLESKSVEELVANLDAVPENIRTAVRNNGGGHA
NHSLFWKLLSPNGGGAPTGELAEAINSKFGSFDQFKEDFAAAAAGRFGSGWAWLVVNNGELEITSTPNQDSPLSEGKTPI
LGLDVWEHAYYLNYQNRRPDYIKAFWNVVNWDEVARLYSEAK
>Mature_201_residues
AYKLPELPYAYDALEPHIDKETMNIHHTKHHNTYVTKLNEAVAGKQDLESKSVEELVANLDAVPENIRTAVRNNGGGHAN
HSLFWKLLSPNGGGAPTGELAEAINSKFGSFDQFKEDFAAAAAGRFGSGWAWLVVNNGELEITSTPNQDSPLSEGKTPIL
GLDVWEHAYYLNYQNRRPDYIKAFWNVVNWDEVARLYSEAK

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=205, Percent_Identity=51.7073170731707, Blast_Score=211, Evalue=2e-55,
Organism=Homo sapiens, GI67782305, Length=205, Percent_Identity=51.7073170731707, Blast_Score=211, Evalue=2e-55,
Organism=Homo sapiens, GI67782309, Length=204, Percent_Identity=43.1372549019608, Blast_Score=155, Evalue=2e-38,
Organism=Escherichia coli, GI1790342, Length=208, Percent_Identity=58.1730769230769, Blast_Score=247, Evalue=3e-67,
Organism=Escherichia coli, GI1787946, Length=197, Percent_Identity=49.746192893401, Blast_Score=199, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17506561, Length=205, Percent_Identity=42.9268292682927, Blast_Score=167, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17569479, Length=203, Percent_Identity=41.3793103448276, Blast_Score=161, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6321796, Length=208, Percent_Identity=42.3076923076923, Blast_Score=161, Evalue=6e-41,
Organism=Drosophila melanogaster, GI17136812, Length=204, Percent_Identity=45.5882352941176, Blast_Score=181, Evalue=3e-46,

Paralogues:

None

Copy number: 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019833
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C; PF00081 Sod_Fe_N [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 22544; Mature: 22413

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS00088 SOD_MN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYKLPELPYAYDALEPHIDKETMNIHHTKHHNTYVTKLNEAVAGKQDLESKSVEELVAN
CCCCCCCCCCHHHHHCCCCCCHHHEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
LDAVPENIRTAVRNNGGGHANHSLFWKLLSPNGGGAPTGELAEAINSKFGSFDQFKEDFA
HHCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
AAAAGRFGSGWAWLVVNNGELEITSTPNQDSPLSEGKTPILGLDVWEHAYYLNYQNRRPD
HHHCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCEEEEHHHHHEEEECCCCCCCH
YIKAFWNVVNWDEVARLYSEAK
HHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure 
AYKLPELPYAYDALEPHIDKETMNIHHTKHHNTYVTKLNEAVAGKQDLESKSVEELVAN
CCCCCCCCCHHHHHCCCCCCHHHEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
LDAVPENIRTAVRNNGGGHANHSLFWKLLSPNGGGAPTGELAEAINSKFGSFDQFKEDFA
HHCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
AAAAGRFGSGWAWLVVNNGELEITSTPNQDSPLSEGKTPILGLDVWEHAYYLNYQNRRPD
HHHCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCEEEEHHHHHEEEECCCCCCCH
YIKAFWNVVNWDEVARLYSEAK
HHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 10568751; 9298659; 10658653 [H]