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The map label for this gene is yqhA [H]

Identifier: 52786387

GI number: 52786387

Start: 2558163

End: 2559002

Strand: Reverse

Name: yqhA [H]

Synonym: BLi02649

Alternate gene names: 52786387

Gene position: 2559002-2558163 (Counterclockwise)

Preceding gene: 52786388

Following gene: 52786386

Centisome position: 60.6

GC content: 45.24

Gene sequence:

>840_bases
ATGGAAAACAAGCATGCAGCCCTTTATGAGTATCTGGTCAAACAGGCGGACAGAATCACAGATGAATGGCTGTCCCGAAC
AGCGTCTGAAAAAGAAAAAACGGCACAGCAATACAAGGACTTTATACTGGCTGTTTCAAAGGTATTTGCCAAAGATGAAC
AGGCGCTATGCTGGAATAAAGCTTCCGGGTGCGCCAAGGAAATTGCCTACGACAGGGCTGTCAGCCAAATTCCGGTTACC
GAAAGCATAAATGGTTTTAAAGTGTGCCGTGAACTTTTAATAGATGAGATCGAGCAATTTTCAGATGAACATGCACCAGA
CAGTTCGAAAAAAGATTTTTTTATCTGGAATAAACAGCTTCACTTAATGATGGATGAGGTCATAGAGCAGTTTATTCTTG
AATATGAGCATACGACAAAGAGCCAATTGAAGGCGCAGACCGAGATGATTCGCGAACTGAGCGCACCGGTCATACCGGTA
TCAGAGCACATCGGTGTGCTGCCGCTCATTGGTGAAATTGATACTCACAGGGCAACGGTGATCATTGAATCTGCGCTCAC
GCAGTGTGCTGAGCTTCATCTCTCGCATCTTTTTATTGATATTTCCGGTGTTCCTGTTGTCGATACGATGGTCGCCCATC
AGTTGTTCAAAGTCGTAGACAGCACAAAGCTGCTTGGCGTTGAAACGGTTCTTTCGGGTTTGAGACCGGAGATTGCCCAA
ACAGTTGTGAAGCTCGGCATGGATTTTTCACATATTAAAACAGAACAGAGTCTTGCTAAGGCGCTTTGCAATAAAGGCTT
CTGCATCCATGAAGACGGCAAGGCCGAAGAGCAGGTTTAA

Upstream 100 bases:

>100_bases
TACATATAGTGTTGACAATCGATTTCGTTTTATACATAGCATTCAAATCAGTTGGTCATTAAGCGATTGATTTAAAGGGA
AAACAATGAGGAGGATTGAC

Downstream 100 bases:

>100_bases
ATTTCTATTTCAGCGGCTTGAAGTCGAATAAAATAGTCAAATCGGTATTCGGAGATTCCGTTTTTGTTACGTATTCGGCT
TGATTTGCGCTTTTTATGGA

Product: YqhA

Products: NA

Alternate protein names: Stressosome protein rsbRD [H]

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MENKHAALYEYLVKQADRITDEWLSRTASEKEKTAQQYKDFILAVSKVFAKDEQALCWNKASGCAKEIAYDRAVSQIPVT
ESINGFKVCRELLIDEIEQFSDEHAPDSSKKDFFIWNKQLHLMMDEVIEQFILEYEHTTKSQLKAQTEMIRELSAPVIPV
SEHIGVLPLIGEIDTHRATVIIESALTQCAELHLSHLFIDISGVPVVDTMVAHQLFKVVDSTKLLGVETVLSGLRPEIAQ
TVVKLGMDFSHIKTEQSLAKALCNKGFCIHEDGKAEEQV

Sequences:

>Translated_279_residues
MENKHAALYEYLVKQADRITDEWLSRTASEKEKTAQQYKDFILAVSKVFAKDEQALCWNKASGCAKEIAYDRAVSQIPVT
ESINGFKVCRELLIDEIEQFSDEHAPDSSKKDFFIWNKQLHLMMDEVIEQFILEYEHTTKSQLKAQTEMIRELSAPVIPV
SEHIGVLPLIGEIDTHRATVIIESALTQCAELHLSHLFIDISGVPVVDTMVAHQLFKVVDSTKLLGVETVLSGLRPEIAQ
TVVKLGMDFSHIKTEQSLAKALCNKGFCIHEDGKAEEQV
>Mature_279_residues
MENKHAALYEYLVKQADRITDEWLSRTASEKEKTAQQYKDFILAVSKVFAKDEQALCWNKASGCAKEIAYDRAVSQIPVT
ESINGFKVCRELLIDEIEQFSDEHAPDSSKKDFFIWNKQLHLMMDEVIEQFILEYEHTTKSQLKAQTEMIRELSAPVIPV
SEHIGVLPLIGEIDTHRATVIIESALTQCAELHLSHLFIDISGVPVVDTMVAHQLFKVVDSTKLLGVETVLSGLRPEIAQ
TVVKLGMDFSHIKTEQSLAKALCNKGFCIHEDGKAEEQV

Specific function: Negative regulator of sigma-B activity. Non- phosphorylated rsbS binds to rsbT, preventing its association with rsbU. Requires any one of rsbRA, rsbRB, rsbRC or rsbRD to sequester rsbT. When rsbS and the rsbR paralog(s) are phosphorylated, they release rs

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 31457; Mature: 31457

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKHAALYEYLVKQADRITDEWLSRTASEKEKTAQQYKDFILAVSKVFAKDEQALCWNK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
ASGCAKEIAYDRAVSQIPVTESINGFKVCRELLIDEIEQFSDEHAPDSSKKDFFIWNKQL
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHH
HLMMDEVIEQFILEYEHTTKSQLKAQTEMIRELSAPVIPVSEHIGVLPLIGEIDTHRATV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHCCCCCCHHHH
IIESALTQCAELHLSHLFIDISGVPVVDTMVAHQLFKVVDSTKLLGVETVLSGLRPEIAQ
HHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
TVVKLGMDFSHIKTEQSLAKALCNKGFCIHEDGKAEEQV
HHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCC
>Mature Secondary Structure
MENKHAALYEYLVKQADRITDEWLSRTASEKEKTAQQYKDFILAVSKVFAKDEQALCWNK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
ASGCAKEIAYDRAVSQIPVTESINGFKVCRELLIDEIEQFSDEHAPDSSKKDFFIWNKQL
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHH
HLMMDEVIEQFILEYEHTTKSQLKAQTEMIRELSAPVIPVSEHIGVLPLIGEIDTHRATV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHCCCCCCHHHH
IIESALTQCAELHLSHLFIDISGVPVVDTMVAHQLFKVVDSTKLLGVETVLSGLRPEIAQ
HHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
TVVKLGMDFSHIKTEQSLAKALCNKGFCIHEDGKAEEQV
HHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 11157946 [H]