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The map label for this gene is yqjM

Identifier: 52786289

GI number: 52786289

Start: 2469871

End: 2470890

Strand: Direct

Name: yqjM

Synonym: BLi02551

Alternate gene names: 52786289

Gene position: 2469871-2470890 (Clockwise)

Preceding gene: 52786287

Following gene: 52786290

Centisome position: 58.49

GC content: 49.71

Gene sequence:

>1020_bases
TTGAGTAATCGAAAACTATTCACACCATGGAGTTTAAAAGGAGTTACACTAAAAAACCGGATTGTCATGTCGCCGATGTG
CATGTATTCCTCCCATGAAAAGGATGGAAAAGTGCAGCCTTTCCACATGACCCACTACATCTCCCGCGCCGTCGGACAAG
TCGGACTAATCATGGTAGAAGCTACCGCCGTCACTCCGCAGGGAAGAATCTCTGACCAGGATCTGGGCATATGGGATGAC
GCGCATATTGACGGACTTGCTGCATTGACGTCACAAATCAAGACGTACGGCAGCAAAACGGCGATTCAGTTGGCGCACGC
CGGAAGAAAAGCCGAGGTCGAAGGTACAATCTACGGACCTTCAGCGATTCCTTTCGACGAAAATTCGCGAACGCCTGTTG
AAATGACAAAAGAGGACATAAAAGAAACCGTTCAGGCTTTCAAAAAAGGAGCTGAACGCGCGAAAGCCGCCGGCTTTGAC
ATCATCGAGATTCATGGAGCCCACGGATACTTGATCAACGAATTTTTATCACCGCTTTCCAACAAACGCGAGGATGAATA
CGGAGGTTCACCGGAAAACCGCTACAGGCTGCTTCGCGAAGTCATCGACGCTGTAAAAGAAGTCTGGGCCGGACCATTAT
TCGTACGCGTTTCAGCTTCAGACTACAAAACAAAAGGCCTTGATGTCGCCGATTATGTCGGTTTCGCCAAATGGATGAAG
GAACAGGGCGTTGATTTGATCGATGTCAGCTCCGGTGCTGTTGTGCCTGCTGATATCAACGTCTTCCCAGGCTACCAAGT
CGGCTTCGCCGATACAATTCGCGCTCAAGCCGAGATTCAGACAGGAGCTGTCGGATTGATCACTAGTGGCCTTCAAGCTG
AGGAAATCCTCCAAAATGGACGCGCTGATCTCATTTTCGTTGCACGGGAGCTGCTGAGAGATCCATACTGGCCGAAAACC
GCTGCCAAACAGTTGAACACAAAAATTGAAGGGCCTGTTCAGTACGACAGAGCCTGGTAA

Upstream 100 bases:

>100_bases
CTGAACATTCTTACATATGGAAATGACTTGAGCAGTTTATATGACGAGAATGGGCAGAATTGGTATAATCGAGGCGAAAA
CTTACGGGAGGCGAAAAAAT

Downstream 100 bases:

>100_bases
ACTTAATATCCCGCCTTATGGCGGGATATTTCTTTTTTTCAACTCGTGAGAAACGAACATCCTTGTTTGTGCGTCTTTCC
TAATAGAACACCATATACAA

Product: NADPH dehydrogenase NamA

Products: NA

Alternate protein names: Xenobiotic reductase

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSNRKLFTPWSLKGVTLKNRIVMSPMCMYSSHEKDGKVQPFHMTHYISRAVGQVGLIMVEATAVTPQGRISDQDLGIWDD
AHIDGLAALTSQIKTYGSKTAIQLAHAGRKAEVEGTIYGPSAIPFDENSRTPVEMTKEDIKETVQAFKKGAERAKAAGFD
IIEIHGAHGYLINEFLSPLSNKREDEYGGSPENRYRLLREVIDAVKEVWAGPLFVRVSASDYKTKGLDVADYVGFAKWMK
EQGVDLIDVSSGAVVPADINVFPGYQVGFADTIRAQAEIQTGAVGLITSGLQAEEILQNGRADLIFVARELLRDPYWPKT
AAKQLNTKIEGPVQYDRAW

Sequences:

>Translated_339_residues
MSNRKLFTPWSLKGVTLKNRIVMSPMCMYSSHEKDGKVQPFHMTHYISRAVGQVGLIMVEATAVTPQGRISDQDLGIWDD
AHIDGLAALTSQIKTYGSKTAIQLAHAGRKAEVEGTIYGPSAIPFDENSRTPVEMTKEDIKETVQAFKKGAERAKAAGFD
IIEIHGAHGYLINEFLSPLSNKREDEYGGSPENRYRLLREVIDAVKEVWAGPLFVRVSASDYKTKGLDVADYVGFAKWMK
EQGVDLIDVSSGAVVPADINVFPGYQVGFADTIRAQAEIQTGAVGLITSGLQAEEILQNGRADLIFVARELLRDPYWPKT
AAKQLNTKIEGPVQYDRAW
>Mature_338_residues
SNRKLFTPWSLKGVTLKNRIVMSPMCMYSSHEKDGKVQPFHMTHYISRAVGQVGLIMVEATAVTPQGRISDQDLGIWDDA
HIDGLAALTSQIKTYGSKTAIQLAHAGRKAEVEGTIYGPSAIPFDENSRTPVEMTKEDIKETVQAFKKGAERAKAAGFDI
IEIHGAHGYLINEFLSPLSNKREDEYGGSPENRYRLLREVIDAVKEVWAGPLFVRVSASDYKTKGLDVADYVGFAKWMKE
QGVDLIDVSSGAVVPADINVFPGYQVGFADTIRAQAEIQTGAVGLITSGLQAEEILQNGRADLIFVARELLRDPYWPKTA
AKQLNTKIEGPVQYDRAW

Specific function: Catalyzes the reduction of the double bond of an array of alpha, beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes

COG id: COG1902

COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family. NamA subfamily

Homologues:

Organism=Escherichia coli, GI1787939, Length=238, Percent_Identity=35.7142857142857, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI1789463, Length=341, Percent_Identity=29.6187683284457, Blast_Score=122, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17540738, Length=356, Percent_Identity=28.6516853932584, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17565138, Length=301, Percent_Identity=27.5747508305648, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI72001454, Length=217, Percent_Identity=31.7972350230415, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17559804, Length=217, Percent_Identity=32.7188940092166, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17559802, Length=340, Percent_Identity=26.7647058823529, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17564188, Length=217, Percent_Identity=29.9539170506912, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17566914, Length=258, Percent_Identity=31.3953488372093, Blast_Score=94, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6325086, Length=240, Percent_Identity=31.6666666666667, Blast_Score=106, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6321973, Length=238, Percent_Identity=31.9327731092437, Blast_Score=99, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NAMA_BACLD (Q65HN9)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_079705.1
- RefSeq:   YP_092118.1
- ProteinModelPortal:   Q65HN9
- SMR:   Q65HN9
- STRING:   Q65HN9
- EnsemblBacteria:   EBBACT00000057220
- EnsemblBacteria:   EBBACT00000059108
- GeneID:   3028377
- GeneID:   3100096
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi02551
- KEGG:   bli:BL00797
- NMPDR:   fig|279010.5.peg.396
- eggNOG:   COG1902
- GeneTree:   EBGT00050000002219
- HOGENOM:   HBG583461
- OMA:   WVEDGWN
- ProtClustDB:   PRK13523
- BioCyc:   BLIC279010-1:BLI02551-MONOMER
- BioCyc:   BLIC279010:BL00797-MONOMER
- HAMAP:   MF_01614
- InterPro:   IPR013785
- InterPro:   IPR001155
- Gene3D:   G3DSA:3.20.20.70

Pfam domain/function: PF00724 Oxidored_FMN

EC number: =1.6.99.1

Molecular weight: Translated: 37405; Mature: 37274

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: BINDING 29-29 BINDING 165-165 BINDING 168-168 BINDING 216-216 BINDING 309-309

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRKLFTPWSLKGVTLKNRIVMSPMCMYSSHEKDGKVQPFHMTHYISRAVGQVGLIMVE
CCCCEECCCCCCCCEEECCEEEECHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE
ATAVTPQGRISDQDLGIWDDAHIDGLAALTSQIKTYGSKTAIQLAHAGRKAEVEGTIYGP
EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHEEEHHHCCCCEEEEEEEECC
SAIPFDENSRTPVEMTKEDIKETVQAFKKGAERAKAAGFDIIEIHGAHGYLINEFLSPLS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH
NKREDEYGGSPENRYRLLREVIDAVKEVWAGPLFVRVSASDYKTKGLDVADYVGFAKWMK
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
EQGVDLIDVSSGAVVPADINVFPGYQVGFADTIRAQAEIQTGAVGLITSGLQAEEILQNG
HCCCCEEECCCCEEEECCCEECCCCCCCHHHHHHHHHHHCCCCEEEHHCCCCHHHHHHCC
RADLIFVARELLRDPYWPKTAAKQLNTKIEGPVQYDRAW
CCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNRKLFTPWSLKGVTLKNRIVMSPMCMYSSHEKDGKVQPFHMTHYISRAVGQVGLIMVE
CCCEECCCCCCCCEEECCEEEECHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE
ATAVTPQGRISDQDLGIWDDAHIDGLAALTSQIKTYGSKTAIQLAHAGRKAEVEGTIYGP
EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHEEEHHHCCCCEEEEEEEECC
SAIPFDENSRTPVEMTKEDIKETVQAFKKGAERAKAAGFDIIEIHGAHGYLINEFLSPLS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH
NKREDEYGGSPENRYRLLREVIDAVKEVWAGPLFVRVSASDYKTKGLDVADYVGFAKWMK
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
EQGVDLIDVSSGAVVPADINVFPGYQVGFADTIRAQAEIQTGAVGLITSGLQAEEILQNG
HCCCCEEECCCCEEEECCCEECCCCCCCHHHHHHHHHHHCCCCEEEHHCCCCHHHHHHCC
RADLIFVARELLRDPYWPKTAAKQLNTKIEGPVQYDRAW
CCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA