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The map label for this gene is spoIIAA [H]

Identifier: 52786236

GI number: 52786236

Start: 2426962

End: 2427315

Strand: Reverse

Name: spoIIAA [H]

Synonym: BLi02497

Alternate gene names: 52786236

Gene position: 2427315-2426962 (Counterclockwise)

Preceding gene: 52786237

Following gene: 52786235

Centisome position: 57.48

GC content: 47.18

Gene sequence:

>354_bases
ATGAGCCTCGGAATCGATATTCACGTCAAAGAATCCGTATTATGCATTCGGTTGACAGGTGAACTCGATCACCATACAGC
AGAAACCTTGAGAAAACAAGTCAGTGACCATCTGGAACAAACCGACATTCGCCATATTGTCATGAATCTTGCAGACCTTT
CGTTTATGGACAGTTCAGGGCTTGGCGTCGTGCTCGGCAGATATAAGGAGATTAAGCAGCTCGGCGGAGAAATGATCGTC
TGCGCCATTTCCCCTGCTGTCAAACGTTTATTTGATATGTCCGGGCTGTTTAAAATCATTCGCCTTGAGCAATCAGAGCA
GCGTGCACTTGAAACGTTGGGGGTGGCGTCATGA

Upstream 100 bases:

>100_bases
TGAATAATGCCGAACGGTCACTAGTTTTGTCACGGTGAAGGAATTTATAAAGTCTGAAGCGAAACACTCATTATCCGATT
TAAACCAAGGAGGAATGAGG

Downstream 100 bases:

>100_bases
AAAATGAAATGAACATTCAGTTTACAGCGCTCAGCCAAAATGAATCGTTTGCACGGGTGACAGTCGCTGCTTTTATCGCT
CAGCTTGACCCGACGATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Stage II sporulation protein AA [H]

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSLGIDIHVKESVLCIRLTGELDHHTAETLRKQVSDHLEQTDIRHIVMNLADLSFMDSSGLGVVLGRYKEIKQLGGEMIV
CAISPAVKRLFDMSGLFKIIRLEQSEQRALETLGVAS

Sequences:

>Translated_117_residues
MSLGIDIHVKESVLCIRLTGELDHHTAETLRKQVSDHLEQTDIRHIVMNLADLSFMDSSGLGVVLGRYKEIKQLGGEMIV
CAISPAVKRLFDMSGLFKIIRLEQSEQRALETLGVAS
>Mature_116_residues
SLGIDIHVKESVLCIRLTGELDHHTAETLRKQVSDHLEQTDIRHIVMNLADLSFMDSSGLGVVLGRYKEIKQLGGEMIVC
AISPAVKRLFDMSGLFKIIRLEQSEQRALETLGVAS

Specific function: In the phosphorylated form it could act as an anti-anti- sigma factor that counteracts spoIIAB and thus releases sigma f from inhibition [H]

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003658
- InterPro:   IPR014237
- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 13003; Mature: 12872

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLGIDIHVKESVLCIRLTGELDHHTAETLRKQVSDHLEQTDIRHIVMNLADLSFMDSSG
CCCCCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LGVVLGRYKEIKQLGGEMIVCAISPAVKRLFDMSGLFKIIRLEQSEQRALETLGVAS
CCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SLGIDIHVKESVLCIRLTGELDHHTAETLRKQVSDHLEQTDIRHIVMNLADLSFMDSSG
CCCCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LGVVLGRYKEIKQLGGEMIVCAISPAVKRLFDMSGLFKIIRLEQSEQRALETLGVAS
CCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2513372 [H]