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The map label for this gene is spoVAF [H]

Identifier: 52786227

GI number: 52786227

Start: 2420654

End: 2422126

Strand: Reverse

Name: spoVAF [H]

Synonym: BLi02488

Alternate gene names: 52786227

Gene position: 2422126-2420654 (Counterclockwise)

Preceding gene: 52786228

Following gene: 52786225

Centisome position: 57.36

GC content: 48.47

Gene sequence:

>1473_bases
ATGAGTGCTCAAAAGCAAGAGAAGACGAACGTATTCCTTGATCCTTCTAAGAATGAAGCGTATTTCAAGAAGCGGGTCGG
CATGGGAGAAAGCTTTGACCTTGGCGTACGGAAGGTCTTTATTCTCGGACATGAAGTTCAGCTTTATTATGTCAACGGAT
TGTGCGACACACAATACATCATTCACCTGTTAAGAGAACTGGTGCATCTGAATGATAAAGAAAAAGAATCGGGCGAGGTC
GAAGACATCGTCGAAAACAGGCTTTTGAACCAGCAGGTTTCAAAAGCGGAAACGCTTGATGAAGCTGTCGACCAAGTGTT
GTCAGGACTGGTTGCCATCATCGTCGAAGATGCGGGCTTTGCTTTTATCATCGATGTCAGAAGCTACCCGGGCAGAACGC
CGGAAGAACCTGATACAGAAAAAGTCGTACGCGGTGCAAGGGACGGACTCGTCGAGAACATCATCGTCAACACAGCCCTG
ATTAGACGCCGGATCAGAGATGAGCGCTTGCGCTACAAAATGCTTCATATCGGTGAACGCTCTAAAACAGACATCTGCCT
CTGCTATTTGGAAGACGTTGCAGATCCCGATCTTGTTGAAGTATTAAAAAAAGAAATTGAAGATGTGAAGATCGACGGGC
TGCCGATGTCGGATAAATCGGTAGAGGAATTCCTGGTCGGCCAAGGCTACAATCCGTTTCCGCTTGTCAGGTTTACGGAA
AGGGCAGACGTAGCCGCAAGCCATATTTTAGAGGGGCATGTCATCGTGATCGTCGATACGTCGCCAAGCGTCATCATCAC
ACCGACCACTTTGTTTCACCATGTTCAGCATGCTGAGGAATACAGACAGACGCCGGCTGTTGGGACGTTTTTAAGGTGGG
TGCGGTTTTTCGGTATTTTGGCCTCCACCTTTTTGCTGCCGCTTTGGCTGCTGTTTGTCATTCATCCGTCGCTCTTGCCT
GATAATTTATCGTTTATCGGGTTGAATAAAGACACCCATATTCCGATTATCATGCAGATTTTCCTGGCGGATCTCGGCGT
CGAATTTTTAAGAATGGCCGCCATTCATACGCCGACGGCGCTTTCGACTGCAATGGGCCTGATCGCCGCTGTATTGATCG
GCGATATCGCGATCAATGTCGGCTTGTTTTCTCCCGAAGTCATTTTATACGTTTCCCTCTCGGCAATCGGAGCCTACACG
ACACCAAGCTACGAGCTGAGCCTGGCGAATAAAATGGTGAAGCTGTTTATGCTGATATTGGTGGCGCTTTTTAAAGTGGA
GGGATTTGTCATCGGATTAACGATCTTAACTATAGTGATGACTTCGATCAGGTCATTGCGAACGCCTTACTTATGGCCTC
TCCTCCCGTTCAATGGAAAAGCGTTTTGGCATGTTCTCGTGCGCACGTCCGTTCCAGGGGGAAAAGTCAGGCCGAGCATC
GTTCATCCGAGAAACCGCTCCAGACAGCCGTGA

Upstream 100 bases:

>100_bases
ATCGGTGATATCGGTAAGATGAACAGAAAAGACGATGTGGAAAAAGGTTCGCCGATTACAATGAAAGCGGTCGAGCTCAT
TTTAGAAAGGAGCGGGTATC

Downstream 100 bases:

>100_bases
AGCCGGCATTCGAAGAGGCTTTTCCCCGGGGAAAAGCCTCTTTTTCAATAATCGAATTCCGGTCTTTGAGTACCGATGCC
TCTGTATTCATTGGCAGAGA

Product: SpoVAF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MSAQKQEKTNVFLDPSKNEAYFKKRVGMGESFDLGVRKVFILGHEVQLYYVNGLCDTQYIIHLLRELVHLNDKEKESGEV
EDIVENRLLNQQVSKAETLDEAVDQVLSGLVAIIVEDAGFAFIIDVRSYPGRTPEEPDTEKVVRGARDGLVENIIVNTAL
IRRRIRDERLRYKMLHIGERSKTDICLCYLEDVADPDLVEVLKKEIEDVKIDGLPMSDKSVEEFLVGQGYNPFPLVRFTE
RADVAASHILEGHVIVIVDTSPSVIITPTTLFHHVQHAEEYRQTPAVGTFLRWVRFFGILASTFLLPLWLLFVIHPSLLP
DNLSFIGLNKDTHIPIIMQIFLADLGVEFLRMAAIHTPTALSTAMGLIAAVLIGDIAINVGLFSPEVILYVSLSAIGAYT
TPSYELSLANKMVKLFMLILVALFKVEGFVIGLTILTIVMTSIRSLRTPYLWPLLPFNGKAFWHVLVRTSVPGGKVRPSI
VHPRNRSRQP

Sequences:

>Translated_490_residues
MSAQKQEKTNVFLDPSKNEAYFKKRVGMGESFDLGVRKVFILGHEVQLYYVNGLCDTQYIIHLLRELVHLNDKEKESGEV
EDIVENRLLNQQVSKAETLDEAVDQVLSGLVAIIVEDAGFAFIIDVRSYPGRTPEEPDTEKVVRGARDGLVENIIVNTAL
IRRRIRDERLRYKMLHIGERSKTDICLCYLEDVADPDLVEVLKKEIEDVKIDGLPMSDKSVEEFLVGQGYNPFPLVRFTE
RADVAASHILEGHVIVIVDTSPSVIITPTTLFHHVQHAEEYRQTPAVGTFLRWVRFFGILASTFLLPLWLLFVIHPSLLP
DNLSFIGLNKDTHIPIIMQIFLADLGVEFLRMAAIHTPTALSTAMGLIAAVLIGDIAINVGLFSPEVILYVSLSAIGAYT
TPSYELSLANKMVKLFMLILVALFKVEGFVIGLTILTIVMTSIRSLRTPYLWPLLPFNGKAFWHVLVRTSVPGGKVRPSI
VHPRNRSRQP
>Mature_489_residues
SAQKQEKTNVFLDPSKNEAYFKKRVGMGESFDLGVRKVFILGHEVQLYYVNGLCDTQYIIHLLRELVHLNDKEKESGEVE
DIVENRLLNQQVSKAETLDEAVDQVLSGLVAIIVEDAGFAFIIDVRSYPGRTPEEPDTEKVVRGARDGLVENIIVNTALI
RRRIRDERLRYKMLHIGERSKTDICLCYLEDVADPDLVEVLKKEIEDVKIDGLPMSDKSVEEFLVGQGYNPFPLVRFTER
ADVAASHILEGHVIVIVDTSPSVIITPTTLFHHVQHAEEYRQTPAVGTFLRWVRFFGILASTFLLPLWLLFVIHPSLLPD
NLSFIGLNKDTHIPIIMQIFLADLGVEFLRMAAIHTPTALSTAMGLIAAVLIGDIAINVGLFSPEVILYVSLSAIGAYTT
PSYELSLANKMVKLFMLILVALFKVEGFVIGLTILTIVMTSIRSLRTPYLWPLLPFNGKAFWHVLVRTSVPGGKVRPSIV
HPRNRSRQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 55048; Mature: 54917

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQKQEKTNVFLDPSKNEAYFKKRVGMGESFDLGVRKVFILGHEVQLYYVNGLCDTQYI
CCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEEECEEEEEEECCCCCHHHH
IHLLRELVHLNDKEKESGEVEDIVENRLLNQQVSKAETLDEAVDQVLSGLVAIIVEDAGF
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCE
AFIIDVRSYPGRTPEEPDTEKVVRGARDGLVENIIVNTALIRRRIRDERLRYKMLHIGER
EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SKTDICLCYLEDVADPDLVEVLKKEIEDVKIDGLPMSDKSVEEFLVGQGYNPFPLVRFTE
CCCCEEEEEECCCCCCHHHHHHHHHHHHCEECCCCCCCHHHHHHHHCCCCCCCCCEEECC
RADVAASHILEGHVIVIVDTSPSVIITPTTLFHHVQHAEEYRQTPAVGTFLRWVRFFGIL
HHHHHHHHHHCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ASTFLLPLWLLFVIHPSLLPDNLSFIGLNKDTHIPIIMQIFLADLGVEFLRMAAIHTPTA
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
LSTAMGLIAAVLIGDIAINVGLFSPEVILYVSLSAIGAYTTPSYELSLANKMVKLFMLIL
HHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VALFKVEGFVIGLTILTIVMTSIRSLRTPYLWPLLPFNGKAFWHVLVRTSVPGGKVRPSI
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCE
VHPRNRSRQP
ECCCCCCCCC
>Mature Secondary Structure 
SAQKQEKTNVFLDPSKNEAYFKKRVGMGESFDLGVRKVFILGHEVQLYYVNGLCDTQYI
CCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEEECEEEEEEECCCCCHHHH
IHLLRELVHLNDKEKESGEVEDIVENRLLNQQVSKAETLDEAVDQVLSGLVAIIVEDAGF
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCE
AFIIDVRSYPGRTPEEPDTEKVVRGARDGLVENIIVNTALIRRRIRDERLRYKMLHIGER
EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SKTDICLCYLEDVADPDLVEVLKKEIEDVKIDGLPMSDKSVEEFLVGQGYNPFPLVRFTE
CCCCEEEEEECCCCCCHHHHHHHHHHHHCEECCCCCCCHHHHHHHHCCCCCCCCCEEECC
RADVAASHILEGHVIVIVDTSPSVIITPTTLFHHVQHAEEYRQTPAVGTFLRWVRFFGIL
HHHHHHHHHHCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ASTFLLPLWLLFVIHPSLLPDNLSFIGLNKDTHIPIIMQIFLADLGVEFLRMAAIHTPTA
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
LSTAMGLIAAVLIGDIAINVGLFSPEVILYVSLSAIGAYTTPSYELSLANKMVKLFMLIL
HHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VALFKVEGFVIGLTILTIVMTSIRSLRTPYLWPLLPFNGKAFWHVLVRTSVPGGKVRPSI
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCE
VHPRNRSRQP
ECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 7934829; 1368705; 3926949 [H]