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The map label for this gene is (hspc4-1 [H]

Identifier: 52786217

GI number: 52786217

Start: 2412290

End: 2412727

Strand: Reverse

Name: (hspc4-1 [H]

Synonym: BLi02478

Alternate gene names: 52786217

Gene position: 2412727-2412290 (Counterclockwise)

Preceding gene: 52786218

Following gene: 52786216

Centisome position: 57.14

GC content: 46.12

Gene sequence:

>438_bases
ATGCCGTTAGTACCTTACGAACCATTTAAACATTTGAATACGATCAGAAGAGAGTTTGATCGGGTGTTTGCCGATTTTCC
GGCAAACTTTGGAGGAGAGCACGGCTTTGGCGATATCAGGGTTGATGTGCATGAAGCCGGGAATGAAATCGTCGCCTCCT
GCGATATCCCGGGCCTTGAAAGCAAAGAAGATGTTCATATTGAGGTTGAAAACAATATGCTTCATATCAGCGGAACCATC
AACAGGTCAAGCGAAGTAAAAGAGGAAAACATGCACCGGAAAGAACGATTTACAGGCCGTTTTCACAGGGCAGTCGCGCT
TCCTGCTCCCGTCAGCCGTGAAGGAATAAGAGCTTCTTATAGGAACGGCGTGCTTGAAGTGAGAATGCCGAAAGACAAGC
CCGACGAAAAAAAGAGGATAGATGTGGAATTTCATTAA

Upstream 100 bases:

>100_bases
AAAAAGCCTCTTCTTCCCTGAGCTTGACCTCATATTGGCATGCATAAATCAAAGCGTACAAGAAATCATAAGGTTATGAA
AACATGAAGGAGGAAAGAAA

Downstream 100 bases:

>100_bases
GGACACAAAAGGTCCCCTTTATGGGGATCTTTTTTATTTGTTTTTGAAACAAATAGCAAAAAATTACGTATATTCTTGGA
AGGAATGCTAAAATTAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MPLVPYEPFKHLNTIRREFDRVFADFPANFGGEHGFGDIRVDVHEAGNEIVASCDIPGLESKEDVHIEVENNMLHISGTI
NRSSEVKEENMHRKERFTGRFHRAVALPAPVSREGIRASYRNGVLEVRMPKDKPDEKKRIDVEFH

Sequences:

>Translated_145_residues
MPLVPYEPFKHLNTIRREFDRVFADFPANFGGEHGFGDIRVDVHEAGNEIVASCDIPGLESKEDVHIEVENNMLHISGTI
NRSSEVKEENMHRKERFTGRFHRAVALPAPVSREGIRASYRNGVLEVRMPKDKPDEKKRIDVEFH
>Mature_144_residues
PLVPYEPFKHLNTIRREFDRVFADFPANFGGEHGFGDIRVDVHEAGNEIVASCDIPGLESKEDVHIEVENNMLHISGTIN
RSSEVKEENMHRKERFTGRFHRAVALPAPVSREGIRASYRNGVLEVRMPKDKPDEKKRIDVEFH

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6319546, Length=126, Percent_Identity=32.5396825396825, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16662; Mature: 16531

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLVPYEPFKHLNTIRREFDRVFADFPANFGGEHGFGDIRVDVHEAGNEIVASCDIPGLE
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCC
SKEDVHIEVENNMLHISGTINRSSEVKEENMHRKERFTGRFHRAVALPAPVSREGIRASY
CCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHH
RNGVLEVRMPKDKPDEKKRIDVEFH
HCCEEEEECCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
PLVPYEPFKHLNTIRREFDRVFADFPANFGGEHGFGDIRVDVHEAGNEIVASCDIPGLE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCC
SKEDVHIEVENNMLHISGTINRSSEVKEENMHRKERFTGRFHRAVALPAPVSREGIRASY
CCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHH
RNGVLEVRMPKDKPDEKKRIDVEFH
HCCEEEEECCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA