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The map label for this gene is lytR [H]

Identifier: 52786191

GI number: 52786191

Start: 2386933

End: 2387817

Strand: Reverse

Name: lytR [H]

Synonym: BLi02450

Alternate gene names: 52786191

Gene position: 2387817-2386933 (Counterclockwise)

Preceding gene: 52786192

Following gene: 52786190

Centisome position: 56.55

GC content: 39.77

Gene sequence:

>885_bases
ATGAAAAATGTGATATTGTTTGTCCTCGCGCTAGTGATAACGATCGGCAGTGTGGTGTCATACGGGATTTACCGTACAGT
CGCCAAATCAATAAATGGAATGTACGAACCTCTTCATCGGGATGCCGAGCAGAAGGATACTGCTCCGCACGATCCTATAT
CCATTCTTTTATTGGGGATAGATGAGCGCCCCGGTGATAAAGGACGCCCGGATTCTATGATTGTAATGACTGTTAACCCG
AAGACAAAGAAAACGACAATGACCAGTATTCCGCGTGATACAAGGGTGTTTATCAAATCAAAAAATAAATTTTCGAAAAT
GAATTCGGCTTATACGTATGGCGGAATTGAAGGAACCGTTGAAACTGTAGAACAATTTTTGAACATTCCAATCAATTATT
ATATCAAAATCAATATGGATGGGTTTAAAGATATAGTAGATGCGATTGGCGGCGTAACGGTGGATAATCGGATTGATTTC
ACCCTTGAAGGCGTGCATCTGTCAAAAGGGAAGCAGCATCTTGACGGCAAAACAGCATTGACATATGCCCGGATGAGAAA
AGACGATCCCCGCGGTGATTTTGGGCGTCAAGAGCGTCAGCGTGAGATTATCAACGAAATTATTCATGAAGGTGCACAAT
TAAAATCATTAACAAACTATCAGGAGATTTTGGCAGCATTAGAAAAAAACATCAAAACAAACTTAACACTGGACAAGATG
ATCGATATTCAAAGTTCTTATAAAGAAGCTGCTAAAGATATTAAGCAGGTAGAAATTGAAGGTGAAGACAAAAAAGTTGA
CAGCTTATGGTATCACCTAGTGACTGACGAAAAGAGAATGGAGATTTCCAAAAAGCTTCGCCAACAATTGGACTTAAAGT
CATAA

Upstream 100 bases:

>100_bases
GATTCGATAAAACCGGTTCATTTCAGATGGAATTAAAAAATATGAGATGCATCAACAAGGAAGGGATACTATGGTAAAAA
TGAGAAAAGGAAAACTAAAG

Downstream 100 bases:

>100_bases
ACGGATTGAAATCAGTTCATTTCAGCGGATCCGCAACGCTCCGGTCAGGAGAACGAAAGCCTTGTAAGGGCACAGCTTAG
TGAAAATGTGGGCTCCTATA

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKNVILFVLALVITIGSVVSYGIYRTVAKSINGMYEPLHRDAEQKDTAPHDPISILLLGIDERPGDKGRPDSMIVMTVNP
KTKKTTMTSIPRDTRVFIKSKNKFSKMNSAYTYGGIEGTVETVEQFLNIPINYYIKINMDGFKDIVDAIGGVTVDNRIDF
TLEGVHLSKGKQHLDGKTALTYARMRKDDPRGDFGRQERQREIINEIIHEGAQLKSLTNYQEILAALEKNIKTNLTLDKM
IDIQSSYKEAAKDIKQVEIEGEDKKVDSLWYHLVTDEKRMEISKKLRQQLDLKS

Sequences:

>Translated_294_residues
MKNVILFVLALVITIGSVVSYGIYRTVAKSINGMYEPLHRDAEQKDTAPHDPISILLLGIDERPGDKGRPDSMIVMTVNP
KTKKTTMTSIPRDTRVFIKSKNKFSKMNSAYTYGGIEGTVETVEQFLNIPINYYIKINMDGFKDIVDAIGGVTVDNRIDF
TLEGVHLSKGKQHLDGKTALTYARMRKDDPRGDFGRQERQREIINEIIHEGAQLKSLTNYQEILAALEKNIKTNLTLDKM
IDIQSSYKEAAKDIKQVEIEGEDKKVDSLWYHLVTDEKRMEISKKLRQQLDLKS
>Mature_294_residues
MKNVILFVLALVITIGSVVSYGIYRTVAKSINGMYEPLHRDAEQKDTAPHDPISILLLGIDERPGDKGRPDSMIVMTVNP
KTKKTTMTSIPRDTRVFIKSKNKFSKMNSAYTYGGIEGTVETVEQFLNIPINYYIKINMDGFKDIVDAIGGVTVDNRIDF
TLEGVHLSKGKQHLDGKTALTYARMRKDDPRGDFGRQERQREIINEIIHEGAQLKSLTNYQEILAALEKNIKTNLTLDKM
IDIQSSYKEAAKDIKQVEIEGEDKKVDSLWYHLVTDEKRMEISKKLRQQLDLKS

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 33425; Mature: 33425

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVILFVLALVITIGSVVSYGIYRTVAKSINGMYEPLHRDAEQKDTAPHDPISILLLGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEEC
DERPGDKGRPDSMIVMTVNPKTKKTTMTSIPRDTRVFIKSKNKFSKMNSAYTYGGIEGTV
CCCCCCCCCCCCEEEEEECCCCCCCHHHCCCCCCEEEEECCHHHHHHCCCEEECCCCHHH
ETVEQFLNIPINYYIKINMDGFKDIVDAIGGVTVDNRIDFTLEGVHLSKGKQHLDGKTAL
HHHHHHHCCCEEEEEEEECCHHHHHHHHHCCEEECCEEEEEEECEECCCCCHHCCCHHHH
TYARMRKDDPRGDFGRQERQREIINEIIHEGAQLKSLTNYQEILAALEKNIKTNLTLDKM
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IDIQSSYKEAAKDIKQVEIEGEDKKVDSLWYHLVTDEKRMEISKKLRQQLDLKS
HHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKNVILFVLALVITIGSVVSYGIYRTVAKSINGMYEPLHRDAEQKDTAPHDPISILLLGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEEC
DERPGDKGRPDSMIVMTVNPKTKKTTMTSIPRDTRVFIKSKNKFSKMNSAYTYGGIEGTV
CCCCCCCCCCCCEEEEEECCCCCCCHHHCCCCCCEEEEECCHHHHHHCCCEEECCCCHHH
ETVEQFLNIPINYYIKINMDGFKDIVDAIGGVTVDNRIDFTLEGVHLSKGKQHLDGKTAL
HHHHHHHCCCEEEEEEEECCHHHHHHHHHCCEEECCEEEEEEECEECCCCCHHCCCHHHH
TYARMRKDDPRGDFGRQERQREIINEIIHEGAQLKSLTNYQEILAALEKNIKTNLTLDKM
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IDIQSSYKEAAKDIKQVEIEGEDKKVDSLWYHLVTDEKRMEISKKLRQQLDLKS
HHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA