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The map label for this gene is yphF [H]

Identifier: 52786160

GI number: 52786160

Start: 2358575

End: 2359291

Strand: Reverse

Name: yphF [H]

Synonym: BLi02417

Alternate gene names: 52786160

Gene position: 2359291-2358575 (Counterclockwise)

Preceding gene: 52786161

Following gene: 52786159

Centisome position: 55.87

GC content: 47.56

Gene sequence:

>717_bases
ATGAAAATCGTAAACGTTCTGCTCGCTATTTTATTGACCGCAATCATGTTAAGCGGTTGTTTGTACCCTGAAGAAAGAAA
GGCGAAAAACAGCGCACCGCATCAGCACCAGCTCAAAGAAGTGCAGGCGGCCGTTGATGAATTCAGGGAGGCGACGGGAG
GGCTTCTGCCGATTAAGACAAGGGATATGGGCGTGCCAATCTATCAAAAATACCCTATCGATTTTAACAGGCTGTCCCCC
CGGTATATGGCTGAGCCGCCGGGCACATCCTATGAAAACGGCGGAGAGTACTTGTACGTTCTTGTCGATGTGGAAAAAAA
GCCGACGGTCAAGCTCATTGATGTAAAAATGTCGGAAATGATCAGGGAGTTAAAGCTTCGGGTCGAAATGTATAAAGATC
AGCACAAGTATCCGCCGTATAAAAAAGTCGTATCCAAGAACTTATTCATGCTTGACCATGAAAAGCTCGGACTGAAAGAG
GCGCCTTCTGTCACGAGTCCGCTTTCGGGCACCTCGCTGCCGCTTCTCGTCGATGAAAAAGGCGACATTAAAGTGGATTA
CCGGATGGATTTGGCCAAGCTGATGAAGAAGTCGAAAAAAACGGTAAAGCCGGGCGAGGAAGTCCAAGATTTGATGTGGG
AAGAGACGCCTTTCGTTCCGGCGTTTTCGGTAAAGTACACAGTGAATGACAAACAGGAACCTGTTTTTCTCGAATAG

Upstream 100 bases:

>100_bases
TTTGTCGCCTACACATGTATGCTCATCTCCGGCGTGATCGTCTTTTTTGTCGTCTTCAGCGGCCCCGTCAACGAATAATG
CATAAAAAAGGAAGATTCAT

Downstream 100 bases:

>100_bases
AATATCGGTCAAAATGCAAGTATCAGTCATGAACCTTTCTCCTCGGCATACAATGAGGAGAAAGGTTTTTTCATGTATGC
CGAAAAAATTTCCCTAAGCT

Product: YphF

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKIVNVLLAILLTAIMLSGCLYPEERKAKNSAPHQHQLKEVQAAVDEFREATGGLLPIKTRDMGVPIYQKYPIDFNRLSP
RYMAEPPGTSYENGGEYLYVLVDVEKKPTVKLIDVKMSEMIRELKLRVEMYKDQHKYPPYKKVVSKNLFMLDHEKLGLKE
APSVTSPLSGTSLPLLVDEKGDIKVDYRMDLAKLMKKSKKTVKPGEEVQDLMWEETPFVPAFSVKYTVNDKQEPVFLE

Sequences:

>Translated_238_residues
MKIVNVLLAILLTAIMLSGCLYPEERKAKNSAPHQHQLKEVQAAVDEFREATGGLLPIKTRDMGVPIYQKYPIDFNRLSP
RYMAEPPGTSYENGGEYLYVLVDVEKKPTVKLIDVKMSEMIRELKLRVEMYKDQHKYPPYKKVVSKNLFMLDHEKLGLKE
APSVTSPLSGTSLPLLVDEKGDIKVDYRMDLAKLMKKSKKTVKPGEEVQDLMWEETPFVPAFSVKYTVNDKQEPVFLE
>Mature_238_residues
MKIVNVLLAILLTAIMLSGCLYPEERKAKNSAPHQHQLKEVQAAVDEFREATGGLLPIKTRDMGVPIYQKYPIDFNRLSP
RYMAEPPGTSYENGGEYLYVLVDVEKKPTVKLIDVKMSEMIRELKLRVEMYKDQHKYPPYKKVVSKNLFMLDHEKLGLKE
APSVTSPLSGTSLPLLVDEKGDIKVDYRMDLAKLMKKSKKTVKPGEEVQDLMWEETPFVPAFSVKYTVNDKQEPVFLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27236; Mature: 27236

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVNVLLAILLTAIMLSGCLYPEERKAKNSAPHQHQLKEVQAAVDEFREATGGLLPIKT
CHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEE
RDMGVPIYQKYPIDFNRLSPRYMAEPPGTSYENGGEYLYVLVDVEKKPTVKLIDVKMSEM
CCCCCCCEEECCCCHHHCCCCEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEECHHHHH
IRELKLRVEMYKDQHKYPPYKKVVSKNLFMLDHEKLGLKEAPSVTSPLSGTSLPLLVDEK
HHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEHHHCCCCCCCCCCCCCCCCCCEEEEECC
GDIKVDYRMDLAKLMKKSKKTVKPGEEVQDLMWEETPFVPAFSVKYTVNDKQEPVFLE
CCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKIVNVLLAILLTAIMLSGCLYPEERKAKNSAPHQHQLKEVQAAVDEFREATGGLLPIKT
CHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEE
RDMGVPIYQKYPIDFNRLSPRYMAEPPGTSYENGGEYLYVLVDVEKKPTVKLIDVKMSEM
CCCCCCCEEECCCCHHHCCCCEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEECHHHHH
IRELKLRVEMYKDQHKYPPYKKVVSKNLFMLDHEKLGLKEAPSVTSPLSGTSLPLLVDEK
HHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEHHHCCCCCCCCCCCCCCCCCCEEEEECC
GDIKVDYRMDLAKLMKKSKKTVKPGEEVQDLMWEETPFVPAFSVKYTVNDKQEPVFLE
CCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 1729246 [H]