Click here to switch to the map view.

The map label for this gene is ypjB [H]

Identifier: 52786131

GI number: 52786131

Start: 2332164

End: 2332964

Strand: Reverse

Name: ypjB [H]

Synonym: BLi02387

Alternate gene names: 52786131

Gene position: 2332964-2332164 (Counterclockwise)

Preceding gene: 52786132

Following gene: 52786129

Centisome position: 55.25

GC content: 45.57

Gene sequence:

>801_bases
ATGATACGAAAGGTGATCCTTTGCATGATGCTTGCGCTTGTTTTTCCTGCGGCCGGTTTGAAAGCGAAAGAATCATCGGC
TTTGCAGGAATTGACGGAACTGTCGGATACGGTATTCCAGCTAACAAGGCAGTCTCAATATGAGGAAGCGGTACAAATTC
TTCAATACTTTGAAAAAAGGCTGAAAGCTGCGGAGAAAGACGGGACAGAGGATATGATGACAGGCTCGGAAATCCGCCAG
GTCAGTCTGGCCTATCATGATACGCTGAAAAGTCTGGAAAGCGAAGAGGTCGCACACCAGGAGAAATTTAAAGCCGCCGC
CCAGTTTAGAATGCTGATGGACGCCATTGAATCAGATCATGATCCGCTGTGGAGCAGTTTGAAAAAGCCGATCATGGATT
CTTTCAGCGCTTTGAAAGCCGGGATTCAGAAAGAAGACAACTTGACATTCAGGGAAAAGTGGAATCATTTTTTATCCTTG
TATGATACGATTTATCCAAGCTTAACGATCGATGTTTCGCCAAAGCAGTTAAAAAGCGTCTCCAACCATATTGCAGTCGT
GGAAAACGGAGGCTTCCAGCAAATGACGGAAAGCAGCAAGCTGGAAAGGCTGACGCTTTTGGAAAAAGATTTGGAAGATG
TGTTTGATCAAGTAGAAGAAGATGATGCAGACCCTTCCCTGCTATGGGTCATCCTGACGACGGGAAGCATTATCCTCTCG
ACGCTGACATACGTCGGTTTCAGAAAGTATAAAGCCGAAGAGGACAGGCGCAGAAAAAGAGAAAAAGATTGGCCGAAATA
A

Upstream 100 bases:

>100_bases
TGTCCCGAAAAGCTTTTAAGCTGTAACACTGCTTCACAATCTTGGTCTAACCTTGTCCCTCTCTTCATACGCTTTAATAG
AAGGAGTGGGAGGGACCGTA

Downstream 100 bases:

>100_bases
GAAGCTCCGCTGATCGCGAGCTTCTTTTTTGCTGACCTTCAATCAGCGGGTGATGGGATTTTTGTTCTCATCAAGCGTAA
AACCCTCTCCCAGCACGTCG

Product: YpjB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MIRKVILCMMLALVFPAAGLKAKESSALQELTELSDTVFQLTRQSQYEEAVQILQYFEKRLKAAEKDGTEDMMTGSEIRQ
VSLAYHDTLKSLESEEVAHQEKFKAAAQFRMLMDAIESDHDPLWSSLKKPIMDSFSALKAGIQKEDNLTFREKWNHFLSL
YDTIYPSLTIDVSPKQLKSVSNHIAVVENGGFQQMTESSKLERLTLLEKDLEDVFDQVEEDDADPSLLWVILTTGSIILS
TLTYVGFRKYKAEEDRRRKREKDWPK

Sequences:

>Translated_266_residues
MIRKVILCMMLALVFPAAGLKAKESSALQELTELSDTVFQLTRQSQYEEAVQILQYFEKRLKAAEKDGTEDMMTGSEIRQ
VSLAYHDTLKSLESEEVAHQEKFKAAAQFRMLMDAIESDHDPLWSSLKKPIMDSFSALKAGIQKEDNLTFREKWNHFLSL
YDTIYPSLTIDVSPKQLKSVSNHIAVVENGGFQQMTESSKLERLTLLEKDLEDVFDQVEEDDADPSLLWVILTTGSIILS
TLTYVGFRKYKAEEDRRRKREKDWPK
>Mature_266_residues
MIRKVILCMMLALVFPAAGLKAKESSALQELTELSDTVFQLTRQSQYEEAVQILQYFEKRLKAAEKDGTEDMMTGSEIRQ
VSLAYHDTLKSLESEEVAHQEKFKAAAQFRMLMDAIESDHDPLWSSLKKPIMDSFSALKAGIQKEDNLTFREKWNHFLSL
YDTIYPSLTIDVSPKQLKSVSNHIAVVENGGFQQMTESSKLERLTLLEKDLEDVFDQVEEDDADPSLLWVILTTGSIILS
TLTYVGFRKYKAEEDRRRKREKDWPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014231 [H]

Pfam domain/function: PF09577 Spore_YpjB [H]

EC number: NA

Molecular weight: Translated: 30596; Mature: 30596

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]