| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is dinG [H]
Identifier: 52786119
GI number: 52786119
Start: 2320263
End: 2323055
Strand: Reverse
Name: dinG [H]
Synonym: BLi02375
Alternate gene names: 52786119
Gene position: 2323055-2320263 (Counterclockwise)
Preceding gene: 52786120
Following gene: 52786118
Centisome position: 55.01
GC content: 47.87
Gene sequence:
>2793_bases ATGAACAATCAACGATATGTGGTCATTGATGTGGAAACGACAGGGAATTCTCCGAAAAAAGGCGACAGAATCATTCAAAT TGCAGCGGTTGTGATTGAAAATGGACAGATAACCGAACGTTTCTCCAAATATGTGAATCCCAATCAGCCGATTCCCGCTT TTATTGAGCAGCTGACGGGCATTTCGAATGAAATGGTTGAAAATGAAGAACCATTTTCGGCGATTGCCGAAGATATTTTT GAGCTGCTTCATGACAGCTGTTTTATCGCTCATAACATTCATTTTGATCTTGCTTTTGTCAAGCATGAGCTGCAGCTGGC CGGCTTTGGTGAGATTGAATGCAGCGTTCTCGATACGGTGGAGCTTTCGAGAATCGTCTTTCCGGGTTTTGACGGCTATA AATTGACAGAGCTGAGCGAAGAGCTTCAGATTCGCCATGAAAACCCGCACAGGGCTGACAGCGATGCGGAAGTGACCGCT TTGATCTTTTTACATATGATGGACAGACTGAAAAGGCTGCCGATTCCCGTTTTGAAATCTATCAGACGTCTATCCTGGCA TTTGATCAGCGACGCGCAGGAGCTTTTTGACGGCTTGATTGCTGAAAAAGGCGCCGATGCTGAACTTGAGGCCGGCTTTA CGAAGGTCGGTTCTTTTGTGATCAGGACTCCTGAAGTCGAGGATGAAGAGGCCGGCCATAAGAGCCGGGTTCCGCAGACA GAGCCGCTCATTTGGGAAAGAGACGGCGGGCTTTCTTCATTGGACGACCGGTTTGACAAGAGAGAAGGTCAGACAAAAAT GATGCGGGAGGTCTGGACCGCTTTTCAAAATCATGAGCATGCGTTAATAGAAGCCGCTACTGGAATCGGAAAATCGCTCG GATATCTCGTGCCGGCTGCAATTCACGCCAAGCAAACAGGCAAACCGGTCGTGATCAGCACATATACGACATTGCTTCAG CAGCAAATGATAAACCGCGATATCCCGCTTTTGGAAAAGATTTTTCCATTTCCGGTAAAAGCCGCGGTTTTAAAGGGCCG CTCCCATTACTTATCCATTCGCAAGTTCAAGCATATTTTACAGGAAGATGATGACAATTATGATAGCGTCCTAGCAAAAG CGCAGATTCTCGTCTGGCTGACAGACACGGAAACGGGCGATTTATCCGAAATTAATCTCCCGTCAGGCGGAAAGCTTTTA TGGGACAGACTGGCATATGATTCGCATTCATATGCAGAAAGCAGCAACATGAGGAAATTGTGTTTTTATGAAAGAGCCAA AGCGAGGGCCCAGAAGGCTGATATGATCATTACCAATCATGCGCTTCTGTTGACTGACGAAACCAATCAGCGAATCCATA CCGGAGATGCCGATATGTTCATTATTGATGAAGCCCATCATTTTGAGCGCGCGGCGGGCGAGCAGTATGGAGCTAGAGCA GACTATGTCTTTCTCCACAAAAGATTGATGAGGCTCGGCACCCTCAAGCAGAGGGGTATTTTGAAAAAAGCCGAACGGCT CTACCGGTCGGCAGGCATTTCATCAGAATCCTTTTTCCAAATGGACGAATGGCTCGCTCAGCTTCTTGAAGAAAGCGATC TATTCTTTACGGCTGTTCATTCTTTTGTCAAGAGGAGGAAACCAAGAAACGATCTAAACCGTCTCTTATATAAGATCGGC GAAACCGGTGAAAGCAGAGCATGGAGCAGGCTTGAAGAAGGCGCACGAAGACTGTGTTCCATGCTGTATGACATGCATCG GCTGTTTATGGATCAAAAGAAAAGCCTCGCTGAAAAACAGGCTTCTTTCACAAGCCGTCAGGCGTTTTTGTTAGAGGAAT ACGATTCGTGCATGAACGACCTTGAAGAATATCGAAAGACGCTCGGCCGCTTGATGTTTGACCCTGTTGAAGATGAGGTC GTCTGGATTGAAATTGACGCGAAGGGCGCAAAAAACGCCGCTGCTATTTACGCTCAGCCGCTTGATACAAGCGAAATTCT GGCCGACCGGTTTTTCACCGAGAAAAAAAGCGTTGTCCTCACATCGGGGACGCTTGTCGTCGAGAACTCTTTTGACTATA TGATCAAAAAGCTTGGTTTAAGCGATTTCTATCCGAGGACCTTGCAAATCGAGTCGCCTTTTTCTTATGATAAACATATG AATATCATGATTCCGACGGATGTCAGCCCGATTCAAAACGATCCGGGAGACTATATTCAGGATGTCTCGCGTTACGTCAA GGCGCTTGCAAAACAGAAAGATGCCAAAGTGCTCGTCCTGTTTACGTCTCATGATATGCTGCGAGACGTCTACCATACAT TGAAAAATGAGGAAGACTTTCCTTGTCAGCTCCTTGCACAGGGGATTTCCGGCGGAAGTCCCGTTAAGGTCATGAAGTTG TTTAAATCGTATCCTCATGCGGTTCTTCTCGGAACGAACCATTTTTGGGAGGGCGTTGACTTTCCGGGTGATGAGCTGAC GACGCTGATCATCGCAAGGCTTCCGTTCAGACCGCCTGACCATCCGGTTGAATCAGCAAAGTGCGACCGGGCAAAGAGAA GGGGAGAAAGTCCGTTTCAAGCGGTATCTCTGCCGGAAGCTGTCCTGGCCTTCAGGCAGGGAATCGGCAGGCTGCTCCGC TCAGAGAAAGACAGCGGAACGGTCGTTATTCTTGACCGCCGCATCCGAACCTCTTCCTACGGCACGGTGTTTATGAAGGC TCTGCCCCCTGCAAAAGTCATGGAGCCTACTTTCCTTGAGCTTGAAGCCTACATAGCCGGGAAAAACGGCTAA
Upstream 100 bases:
>100_bases AGAGCGAAAGAGAAGAAGCCGGTTTTGAAGCTTTTCCCCCGCGCCTTTTTAAAACGTGTTACACTTTTGTCGAAGGTATC GAAATTGAGGTGTCCATTGA
Downstream 100 bases:
>100_bases AAGCCGCATAAAGCGGCTCTTAAATGGTGTGGATTAAGGTTTTATTTTTTAGGCTGTTTATTTAAACGGATATCCCGTTG TAACAACTAGTATGGCTTTT
Product: bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 930; Mature: 930
Protein sequence:
>930_residues MNNQRYVVIDVETTGNSPKKGDRIIQIAAVVIENGQITERFSKYVNPNQPIPAFIEQLTGISNEMVENEEPFSAIAEDIF ELLHDSCFIAHNIHFDLAFVKHELQLAGFGEIECSVLDTVELSRIVFPGFDGYKLTELSEELQIRHENPHRADSDAEVTA LIFLHMMDRLKRLPIPVLKSIRRLSWHLISDAQELFDGLIAEKGADAELEAGFTKVGSFVIRTPEVEDEEAGHKSRVPQT EPLIWERDGGLSSLDDRFDKREGQTKMMREVWTAFQNHEHALIEAATGIGKSLGYLVPAAIHAKQTGKPVVISTYTTLLQ QQMINRDIPLLEKIFPFPVKAAVLKGRSHYLSIRKFKHILQEDDDNYDSVLAKAQILVWLTDTETGDLSEINLPSGGKLL WDRLAYDSHSYAESSNMRKLCFYERAKARAQKADMIITNHALLLTDETNQRIHTGDADMFIIDEAHHFERAAGEQYGARA DYVFLHKRLMRLGTLKQRGILKKAERLYRSAGISSESFFQMDEWLAQLLEESDLFFTAVHSFVKRRKPRNDLNRLLYKIG ETGESRAWSRLEEGARRLCSMLYDMHRLFMDQKKSLAEKQASFTSRQAFLLEEYDSCMNDLEEYRKTLGRLMFDPVEDEV VWIEIDAKGAKNAAAIYAQPLDTSEILADRFFTEKKSVVLTSGTLVVENSFDYMIKKLGLSDFYPRTLQIESPFSYDKHM NIMIPTDVSPIQNDPGDYIQDVSRYVKALAKQKDAKVLVLFTSHDMLRDVYHTLKNEEDFPCQLLAQGISGGSPVKVMKL FKSYPHAVLLGTNHFWEGVDFPGDELTTLIIARLPFRPPDHPVESAKCDRAKRRGESPFQAVSLPEAVLAFRQGIGRLLR SEKDSGTVVILDRRIRTSSYGTVFMKALPPAKVMEPTFLELEAYIAGKNG
Sequences:
>Translated_930_residues MNNQRYVVIDVETTGNSPKKGDRIIQIAAVVIENGQITERFSKYVNPNQPIPAFIEQLTGISNEMVENEEPFSAIAEDIF ELLHDSCFIAHNIHFDLAFVKHELQLAGFGEIECSVLDTVELSRIVFPGFDGYKLTELSEELQIRHENPHRADSDAEVTA LIFLHMMDRLKRLPIPVLKSIRRLSWHLISDAQELFDGLIAEKGADAELEAGFTKVGSFVIRTPEVEDEEAGHKSRVPQT EPLIWERDGGLSSLDDRFDKREGQTKMMREVWTAFQNHEHALIEAATGIGKSLGYLVPAAIHAKQTGKPVVISTYTTLLQ QQMINRDIPLLEKIFPFPVKAAVLKGRSHYLSIRKFKHILQEDDDNYDSVLAKAQILVWLTDTETGDLSEINLPSGGKLL WDRLAYDSHSYAESSNMRKLCFYERAKARAQKADMIITNHALLLTDETNQRIHTGDADMFIIDEAHHFERAAGEQYGARA DYVFLHKRLMRLGTLKQRGILKKAERLYRSAGISSESFFQMDEWLAQLLEESDLFFTAVHSFVKRRKPRNDLNRLLYKIG ETGESRAWSRLEEGARRLCSMLYDMHRLFMDQKKSLAEKQASFTSRQAFLLEEYDSCMNDLEEYRKTLGRLMFDPVEDEV VWIEIDAKGAKNAAAIYAQPLDTSEILADRFFTEKKSVVLTSGTLVVENSFDYMIKKLGLSDFYPRTLQIESPFSYDKHM NIMIPTDVSPIQNDPGDYIQDVSRYVKALAKQKDAKVLVLFTSHDMLRDVYHTLKNEEDFPCQLLAQGISGGSPVKVMKL FKSYPHAVLLGTNHFWEGVDFPGDELTTLIIARLPFRPPDHPVESAKCDRAKRRGESPFQAVSLPEAVLAFRQGIGRLLR SEKDSGTVVILDRRIRTSSYGTVFMKALPPAKVMEPTFLELEAYIAGKNG >Mature_930_residues MNNQRYVVIDVETTGNSPKKGDRIIQIAAVVIENGQITERFSKYVNPNQPIPAFIEQLTGISNEMVENEEPFSAIAEDIF ELLHDSCFIAHNIHFDLAFVKHELQLAGFGEIECSVLDTVELSRIVFPGFDGYKLTELSEELQIRHENPHRADSDAEVTA LIFLHMMDRLKRLPIPVLKSIRRLSWHLISDAQELFDGLIAEKGADAELEAGFTKVGSFVIRTPEVEDEEAGHKSRVPQT EPLIWERDGGLSSLDDRFDKREGQTKMMREVWTAFQNHEHALIEAATGIGKSLGYLVPAAIHAKQTGKPVVISTYTTLLQ QQMINRDIPLLEKIFPFPVKAAVLKGRSHYLSIRKFKHILQEDDDNYDSVLAKAQILVWLTDTETGDLSEINLPSGGKLL WDRLAYDSHSYAESSNMRKLCFYERAKARAQKADMIITNHALLLTDETNQRIHTGDADMFIIDEAHHFERAAGEQYGARA DYVFLHKRLMRLGTLKQRGILKKAERLYRSAGISSESFFQMDEWLAQLLEESDLFFTAVHSFVKRRKPRNDLNRLLYKIG ETGESRAWSRLEEGARRLCSMLYDMHRLFMDQKKSLAEKQASFTSRQAFLLEEYDSCMNDLEEYRKTLGRLMFDPVEDEV VWIEIDAKGAKNAAAIYAQPLDTSEILADRFFTEKKSVVLTSGTLVVENSFDYMIKKLGLSDFYPRTLQIESPFSYDKHM NIMIPTDVSPIQNDPGDYIQDVSRYVKALAKQKDAKVLVLFTSHDMLRDVYHTLKNEEDFPCQLLAQGISGGSPVKVMKL FKSYPHAVLLGTNHFWEGVDFPGDELTTLIIARLPFRPPDHPVESAKCDRAKRRGESPFQAVSLPEAVLAFRQGIGRLLR SEKDSGTVVILDRRIRTSSYGTVFMKALPPAKVMEPTFLELEAYIAGKNG
Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788110, Length=673, Percent_Identity=28.3803863298663, Blast_Score=234, Evalue=2e-62, Organism=Escherichia coli, GI1787018, Length=719, Percent_Identity=25.452016689847, Blast_Score=153, Evalue=6e-38, Organism=Escherichia coli, GI1786409, Length=173, Percent_Identity=27.1676300578035, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR006054 - InterPro: IPR006310 - InterPro: IPR006055 - InterPro: IPR013520 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR001650 - InterPro: IPR006935 - InterPro: IPR012337 [H]
Pfam domain/function: PF00929 Exonuc_X-T; PF04851 ResIII [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 105774; Mature: 105774
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNQRYVVIDVETTGNSPKKGDRIIQIAAVVIENGQITERFSKYVNPNQPIPAFIEQLTG CCCCEEEEEEEEECCCCCCCCCHHEEEEEEHCCCCCHHHHHHHHCCCCCCHHHHHHHHHC ISNEMVENEEPFSAIAEDIFELLHDSCFIAHNIHFDLAFVKHELQLAGFGEIECSVLDTV CHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEECEEEHHHHHHHHHCCCCCCEEEEEECHH ELSRIVFPGFDGYKLTELSEELQIRHENPHRADSDAEVTALIFLHMMDRLKRLPIPVLKS HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH IRRLSWHLISDAQELFDGLIAEKGADAELEAGFTKVGSFVIRTPEVEDEEAGHKSRVPQT HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCC EPLIWERDGGLSSLDDRFDKREGQTKMMREVWTAFQNHEHALIEAATGIGKSLGYLVPAA CCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH IHAKQTGKPVVISTYTTLLQQQMINRDIPLLEKIFPFPVKAAVLKGRSHYLSIRKFKHIL HHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHH QEDDDNYDSVLAKAQILVWLTDTETGDLSEINLPSGGKLLWDRLAYDSHSYAESSNMRKL HCCCCCHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCHHH CFYERAKARAQKADMIITNHALLLTDETNQRIHTGDADMFIIDEAHHFERAAGEQYGARA HHHHHHHHHHHHCCEEEECCEEEEECCCCCEEECCCCCEEEEECHHHHHHHHHHHCCCCC DYVFLHKRLMRLGTLKQRGILKKAERLYRSAGISSESFFQMDEWLAQLLEESDLFFTAVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH SFVKRRKPRNDLNRLLYKIGETGESRAWSRLEEGARRLCSMLYDMHRLFMDQKKSLAEKQ HHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASFTSRQAFLLEEYDSCMNDLEEYRKTLGRLMFDPVEDEVVWIEIDAKGAKNAAAIYAQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECC LDTSEILADRFFTEKKSVVLTSGTLVVENSFDYMIKKLGLSDFYPRTLQIESPFSYDKHM CCHHHHHHHHHHCCCCCEEEEECEEEEECCHHHHHHHHCCCCCCCCEEEECCCCCCCCCE NIMIPTDVSPIQNDPGDYIQDVSRYVKALAKQKDAKVLVLFTSHDMLRDVYHTLKNEEDF EEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCC PCQLLAQGISGGSPVKVMKLFKSYPHAVLLGTNHFWEGVDFPGDELTTLIIARLPFRPPD CHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCC HPVESAKCDRAKRRGESPFQAVSLPEAVLAFRQGIGRLLRSEKDSGTVVILDRRIRTSSY CCCCHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC GTVFMKALPPAKVMEPTFLELEAYIAGKNG CEEEEECCCCHHHCCCCCEEEEEEEECCCC >Mature Secondary Structure MNNQRYVVIDVETTGNSPKKGDRIIQIAAVVIENGQITERFSKYVNPNQPIPAFIEQLTG CCCCEEEEEEEEECCCCCCCCCHHEEEEEEHCCCCCHHHHHHHHCCCCCCHHHHHHHHHC ISNEMVENEEPFSAIAEDIFELLHDSCFIAHNIHFDLAFVKHELQLAGFGEIECSVLDTV CHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEECEEEHHHHHHHHHCCCCCCEEEEEECHH ELSRIVFPGFDGYKLTELSEELQIRHENPHRADSDAEVTALIFLHMMDRLKRLPIPVLKS HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH IRRLSWHLISDAQELFDGLIAEKGADAELEAGFTKVGSFVIRTPEVEDEEAGHKSRVPQT HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCC EPLIWERDGGLSSLDDRFDKREGQTKMMREVWTAFQNHEHALIEAATGIGKSLGYLVPAA CCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH IHAKQTGKPVVISTYTTLLQQQMINRDIPLLEKIFPFPVKAAVLKGRSHYLSIRKFKHIL HHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHH QEDDDNYDSVLAKAQILVWLTDTETGDLSEINLPSGGKLLWDRLAYDSHSYAESSNMRKL HCCCCCHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCHHH CFYERAKARAQKADMIITNHALLLTDETNQRIHTGDADMFIIDEAHHFERAAGEQYGARA HHHHHHHHHHHHCCEEEECCEEEEECCCCCEEECCCCCEEEEECHHHHHHHHHHHCCCCC DYVFLHKRLMRLGTLKQRGILKKAERLYRSAGISSESFFQMDEWLAQLLEESDLFFTAVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH SFVKRRKPRNDLNRLLYKIGETGESRAWSRLEEGARRLCSMLYDMHRLFMDQKKSLAEKQ HHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASFTSRQAFLLEEYDSCMNDLEEYRKTLGRLMFDPVEDEVVWIEIDAKGAKNAAAIYAQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECC LDTSEILADRFFTEKKSVVLTSGTLVVENSFDYMIKKLGLSDFYPRTLQIESPFSYDKHM CCHHHHHHHHHHCCCCCEEEEECEEEEECCHHHHHHHHCCCCCCCCEEEECCCCCCCCCE NIMIPTDVSPIQNDPGDYIQDVSRYVKALAKQKDAKVLVLFTSHDMLRDVYHTLKNEEDF EEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCC PCQLLAQGISGGSPVKVMKLFKSYPHAVLLGTNHFWEGVDFPGDELTTLIIARLPFRPPD CHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCC HPVESAKCDRAKRRGESPFQAVSLPEAVLAFRQGIGRLLRSEKDSGTVVILDRRIRTSSY CCCCHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC GTVFMKALPPAKVMEPTFLELEAYIAGKNG CEEEEECCCCHHHCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]