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The map label for this gene is ypvA [H]

Identifier: 52786094

GI number: 52786094

Start: 2297543

End: 2299435

Strand: Reverse

Name: ypvA [H]

Synonym: BLi02350

Alternate gene names: 52786094

Gene position: 2299435-2297543 (Counterclockwise)

Preceding gene: 52786095

Following gene: 52786093

Centisome position: 54.45

GC content: 47.33

Gene sequence:

>1893_bases
TTGACGAAAACATTAACCTTTTATGAAGAACTGAACAATTGGATCGGTGATGTATTTTACGATATTCTTCCTGAAAAAGG
CTTTGATTTGCGCGATGAGCAAATATTCATGGCTTTTCAATTAGAGCGGGCATTTAAGGAAAAGAAGGTCATGTTTGCGG
AAGCCGGCGTCGGCACCGGAAAAACGCTCGTCTATCTTCTGTTTGCCTTGAGCTATGCCAGGTATACGGGCAAGCCGGCG
GTCATCGCCTGCGCGGATGAGACGCTGATCGAACAGCTCGTCAAAAAAGAAGGCGACATTTATAAAATTTCCGAGCATTT
AGGCCTGACGATCGACGCAAGGCTCAGCAAGTCGCATGATCAATATTTATGTTTGAAAAAACTGGAGAAAACGATGCAGC
GCTCTGATGATGAAAAATGGCTTGACCTTTACGAAAGTCTGCCGTCTTTCGTTCACGAATCGCAGGGCATGCAGGCTTTT
TATCCGTACGGCGACCGAAAAGAGAATTCGTCTTTATCAAACGATGAGTGGTCTGAAATCGGTTACGACTCTTTTCAGGA
CTGTCTTACATGTGATATGAGGCACCGCTGCGGGCTCACACTGTCAAGAGACCATTATCGAAAATCAACCGATTTCATCA
TCTGTTCCCATGATTTCTATATGGAGCACGTTTGGACGGAAGAGGCGAGAAAGCGGGAAGGCCAGCTTCCGCTTTTGCCG
GAGCACAGCGCAGTGGTTTTTGATGAAGGGCATCTGCTCGAGTTTGCGGCCCAAAAAGCGCTGACATACAGGGTGAAACA
ATCCACGCTCGAAATGTTCCTTGAGCGCCTGCTCGGCAATGACATCAGAGAAGAATTTGCAGAGCTTGTCGAAGAAGCGC
TTCGCGCCAACGACGAATTTTTCGGTTTGCTTACGGAAAATGCCGAAAAAGCAGAAGGCTCTGAGCGCATGCGCATCAAA
GACGATACCGATGTGAAAAAAGCGGCCGCCGAGCTGTATGATTTGCTTGAAAAAATCGGAGAGGCGCTCGTTTTTGAGGG
CGAGCTGTACACGATCGACCAGTACGCTTTAACTGTTGTCGAAGAGTATTTAGAACAGATGGCTTACTCCCTTTCGCTCT
ACAGGAAAAATGCGATCAGCTGGCTTGAACAAAAAGAGCTTGAGTCGACATTCGTCGTCATGCCGAGAACCGTCTCTGAA
GTTCTCGGAGAAAAGGTGTTCTCCAAGCAGATTCCGTTTATTTTCTCATCGGCGACATTATCGGAAAACGGATCGTTCGA
TTATTTGGCGACCAGCCTCGGGATCCGCGATTACTTATCATTTACCGTCGATTCGCCGTACGATTATGAAGAGCAGATGA
AAGTGTACATCCATCAAATCGAGGAAAAAGAAGCGAAAGAAGAAGCGGCAATCCGTGCAATCAAAGAATCTGGAGGGAAG
ACGCTGATCCTGTTTCCGTCTTTTGAAGAGCTTCTGTCCTTCAAGCGCCGGACTGCACAGGAATCATTTTCGTTTCCCGT
TTACTTTGAAGGGGATGAAGAAATCAGTACAATCGTTGAAAAGTTTCAAACGGTAGAAGAATCCGTCTTGTGCTCTGTCC
ATCTATGGGAAGGGCTCGATATTCCCGGAGACCCGCTTCAAAATGTCATCATCTGGTCGCTCCCATTTCCGCCGCATGAT
CCCGTGTTTGAAGCGAAGCGGAGCGGCGTGGAAAACGCCTTTCGCGAAGTAGACCTTCCTTACATGCTGCTAAGACTTCG
CCAAGGGATCGGACGTCTGATCAGATCAAACAGCGACAGCGGCACGATCAGCATTTTTGCGGGCGATGAAAAAGAATGGA
ATGTGATAAAAGAAGTCGAATCTGTTCTTCCTGTTCAGCCAGTCTATGTATAA

Upstream 100 bases:

>100_bases
TTGTTGAATTTCGGGAGTCATAGTGATAGGATAGAAGTTCTGAAAACTTCGATATTTGGGGGTTGGAGCAGGGTGACAGC
ATCTCGTCTGCCTTGTTTCA

Downstream 100 bases:

>100_bases
GAAAAGCGGACATCCCGCTTTTCTTTTTTTGGCTGCATAAAAGTTGACTTTCGTAAATATTTCCATTAGTCTGATTACAA
TTCGCATCATATACGGGAAG

Product: YpvA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 630; Mature: 629

Protein sequence:

>630_residues
MTKTLTFYEELNNWIGDVFYDILPEKGFDLRDEQIFMAFQLERAFKEKKVMFAEAGVGTGKTLVYLLFALSYARYTGKPA
VIACADETLIEQLVKKEGDIYKISEHLGLTIDARLSKSHDQYLCLKKLEKTMQRSDDEKWLDLYESLPSFVHESQGMQAF
YPYGDRKENSSLSNDEWSEIGYDSFQDCLTCDMRHRCGLTLSRDHYRKSTDFIICSHDFYMEHVWTEEARKREGQLPLLP
EHSAVVFDEGHLLEFAAQKALTYRVKQSTLEMFLERLLGNDIREEFAELVEEALRANDEFFGLLTENAEKAEGSERMRIK
DDTDVKKAAAELYDLLEKIGEALVFEGELYTIDQYALTVVEEYLEQMAYSLSLYRKNAISWLEQKELESTFVVMPRTVSE
VLGEKVFSKQIPFIFSSATLSENGSFDYLATSLGIRDYLSFTVDSPYDYEEQMKVYIHQIEEKEAKEEAAIRAIKESGGK
TLILFPSFEELLSFKRRTAQESFSFPVYFEGDEEISTIVEKFQTVEESVLCSVHLWEGLDIPGDPLQNVIIWSLPFPPHD
PVFEAKRSGVENAFREVDLPYMLLRLRQGIGRLIRSNSDSGTISIFAGDEKEWNVIKEVESVLPVQPVYV

Sequences:

>Translated_630_residues
MTKTLTFYEELNNWIGDVFYDILPEKGFDLRDEQIFMAFQLERAFKEKKVMFAEAGVGTGKTLVYLLFALSYARYTGKPA
VIACADETLIEQLVKKEGDIYKISEHLGLTIDARLSKSHDQYLCLKKLEKTMQRSDDEKWLDLYESLPSFVHESQGMQAF
YPYGDRKENSSLSNDEWSEIGYDSFQDCLTCDMRHRCGLTLSRDHYRKSTDFIICSHDFYMEHVWTEEARKREGQLPLLP
EHSAVVFDEGHLLEFAAQKALTYRVKQSTLEMFLERLLGNDIREEFAELVEEALRANDEFFGLLTENAEKAEGSERMRIK
DDTDVKKAAAELYDLLEKIGEALVFEGELYTIDQYALTVVEEYLEQMAYSLSLYRKNAISWLEQKELESTFVVMPRTVSE
VLGEKVFSKQIPFIFSSATLSENGSFDYLATSLGIRDYLSFTVDSPYDYEEQMKVYIHQIEEKEAKEEAAIRAIKESGGK
TLILFPSFEELLSFKRRTAQESFSFPVYFEGDEEISTIVEKFQTVEESVLCSVHLWEGLDIPGDPLQNVIIWSLPFPPHD
PVFEAKRSGVENAFREVDLPYMLLRLRQGIGRLIRSNSDSGTISIFAGDEKEWNVIKEVESVLPVQPVYV
>Mature_629_residues
TKTLTFYEELNNWIGDVFYDILPEKGFDLRDEQIFMAFQLERAFKEKKVMFAEAGVGTGKTLVYLLFALSYARYTGKPAV
IACADETLIEQLVKKEGDIYKISEHLGLTIDARLSKSHDQYLCLKKLEKTMQRSDDEKWLDLYESLPSFVHESQGMQAFY
PYGDRKENSSLSNDEWSEIGYDSFQDCLTCDMRHRCGLTLSRDHYRKSTDFIICSHDFYMEHVWTEEARKREGQLPLLPE
HSAVVFDEGHLLEFAAQKALTYRVKQSTLEMFLERLLGNDIREEFAELVEEALRANDEFFGLLTENAEKAEGSERMRIKD
DTDVKKAAAELYDLLEKIGEALVFEGELYTIDQYALTVVEEYLEQMAYSLSLYRKNAISWLEQKELESTFVVMPRTVSEV
LGEKVFSKQIPFIFSSATLSENGSFDYLATSLGIRDYLSFTVDSPYDYEEQMKVYIHQIEEKEAKEEAAIRAIKESGGKT
LILFPSFEELLSFKRRTAQESFSFPVYFEGDEEISTIVEKFQTVEESVLCSVHLWEGLDIPGDPLQNVIIWSLPFPPHDP
VFEAKRSGVENAFREVDLPYMLLRLRQGIGRLIRSNSDSGTISIFAGDEKEWNVIKEVESVLPVQPVYV

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=624, Percent_Identity=25.6410256410256, Blast_Score=148, Evalue=9e-37,
Organism=Escherichia coli, GI1787018, Length=674, Percent_Identity=25.3709198813056, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014013
- InterPro:   IPR006555 [H]

Pfam domain/function: NA

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 72685; Mature: 72554

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTLTFYEELNNWIGDVFYDILPEKGFDLRDEQIFMAFQLERAFKEKKVMFAEAGVGTG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCC
KTLVYLLFALSYARYTGKPAVIACADETLIEQLVKKEGDIYKISEHLGLTIDARLSKSHD
HHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCEEEEHHHCCEEEEECCCCCCH
QYLCLKKLEKTMQRSDDEKWLDLYESLPSFVHESQGMQAFYPYGDRKENSSLSNDEWSEI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHC
GYDSFQDCLTCDMRHRCGLTLSRDHYRKSTDFIICSHDFYMEHVWTEEARKREGQLPLLP
CCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCC
EHSAVVFDEGHLLEFAAQKALTYRVKQSTLEMFLERLLGNDIREEFAELVEEALRANDEF
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCE
FGLLTENAEKAEGSERMRIKDDTDVKKAAAELYDLLEKIGEALVFEGELYTIDQYALTVV
EEEECCCCHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHEEECCCEEEHHHHHHHHH
EEYLEQMAYSLSLYRKNAISWLEQKELESTFVVMPRTVSEVLGEKVFSKQIPFIFSSATL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHCCCEEEECCCC
SENGSFDYLATSLGIRDYLSFTVDSPYDYEEQMKVYIHQIEEKEAKEEAAIRAIKESGGK
CCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TLILFPSFEELLSFKRRTAQESFSFPVYFEGDEEISTIVEKFQTVEESVLCSVHLWEGLD
EEEECCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHEEEEEEECCCC
IPGDPLQNVIIWSLPFPPHDPVFEAKRSGVENAFREVDLPYMLLRLRQGIGRLIRSNSDS
CCCCCCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
GTISIFAGDEKEWNVIKEVESVLPVQPVYV
CEEEEEECCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TKTLTFYEELNNWIGDVFYDILPEKGFDLRDEQIFMAFQLERAFKEKKVMFAEAGVGTG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCC
KTLVYLLFALSYARYTGKPAVIACADETLIEQLVKKEGDIYKISEHLGLTIDARLSKSHD
HHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCEEEEHHHCCEEEEECCCCCCH
QYLCLKKLEKTMQRSDDEKWLDLYESLPSFVHESQGMQAFYPYGDRKENSSLSNDEWSEI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHC
GYDSFQDCLTCDMRHRCGLTLSRDHYRKSTDFIICSHDFYMEHVWTEEARKREGQLPLLP
CCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCC
EHSAVVFDEGHLLEFAAQKALTYRVKQSTLEMFLERLLGNDIREEFAELVEEALRANDEF
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCE
FGLLTENAEKAEGSERMRIKDDTDVKKAAAELYDLLEKIGEALVFEGELYTIDQYALTVV
EEEECCCCHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHEEECCCEEEHHHHHHHHH
EEYLEQMAYSLSLYRKNAISWLEQKELESTFVVMPRTVSEVLGEKVFSKQIPFIFSSATL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHCCCEEEECCCC
SENGSFDYLATSLGIRDYLSFTVDSPYDYEEQMKVYIHQIEEKEAKEEAAIRAIKESGGK
CCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TLILFPSFEELLSFKRRTAQESFSFPVYFEGDEEISTIVEKFQTVEESVLCSVHLWEGLD
EEEECCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHEEEEEEECCCC
IPGDPLQNVIIWSLPFPPHDPVFEAKRSGVENAFREVDLPYMLLRLRQGIGRLIRSNSDS
CCCCCCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
GTISIFAGDEKEWNVIKEVESVLPVQPVYV
CEEEEEECCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]