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The map label for this gene is ycgR [H]

Identifier: 52786030

GI number: 52786030

Start: 2242526

End: 2243533

Strand: Direct

Name: ycgR [H]

Synonym: BLi02286

Alternate gene names: 52786030

Gene position: 2242526-2243533 (Clockwise)

Preceding gene: 52786027

Following gene: 52786031

Centisome position: 53.11

GC content: 48.31

Gene sequence:

>1008_bases
ATGTTTCGTTCACTTAACAGTTATTTAATCGACTTTACCGGGCTTGTTGTCATCAGTGTTCTGATATGCCTTGTGTCAGC
CGGCGGGTCGCTCGCCTCAGGCCTCCCCTTCCAGATTCCGGCTTCCGTTCTGCAGCTGAATACGATTTTCATCAGCATTT
TAATCGAAGCCCTTCCCTTTGTGTTAATCGGAGTATTAATCGCCGGTTTCATCCAGATCTTTGTGACTGAAGAGCATATT
CGCTCCCTTTTTCCGAAAAACAGGTTTTCAGGAGTGATTGTCAGCTGTTTACTCGGCGCTTGTTTTCCGGCTTGCGAATG
CGGGATTGTCCCGATCGTGAGAAGACTCGTGTCAAAAGGCGTTCCCATCTATGCAGGCGTCGGCTTTCTGTTGACAGGTC
CGCTGATCAATCCGATTGTCGTCTTATCCACTTATATGGCTTTTGGCAATGACTTGCGAATGGCCGTTTTAAGGGTTGCC
GTCGGTTTTGCCGCAGCGGTCATCATCGCTTTTGCGATCAGCATGATGTTCCGCTCGAGCCAGCTGAAAACGGAAAGCCG
GCAGACAGCTGCACACTGCGCCCATTCCGGCAGACGATCCCCTTTTTCGGAAAAGCTCTTTGATATGCTGAAACATGCTG
TTGACGAATTCTTTGATATGGGGAGGTTTCTGATTATCGGCGCTTTAGTTGCAGCGCTTGTGCAAACATACCTCCCGTTA
AAATCGCTGTTTGTGTTCGGAGGGGGCATGCTTGACTCGGCATTGGTCATGATGGGGCTGGCTTACTTTTTATCGCTGTG
CTCTGAAGCGGATGCATTTATCGGCGCTTCCTTCACCAATTTGTTTCCTTCCTCATCCATCCTTGCTTTTCTCGTTTACG
GGCCGATGCTCGACTTAAAAAATACGGTCATGATGCTGCATGCGTTTAAGCCGAAGTTCGTCATTTGTTTGTCTGTCCTG
ATCACCGTTGTTGTCTTTGTTTGTATCAAAGTTGTCAGTTTGCTGTAG

Upstream 100 bases:

>100_bases
GATTCGGCATCATTCTTTTTCTTGTCATGTTTAAAAAAGGACAGGCATACCTTTAAAAAAGAATCATTACGATTAGCTAT
TTCAGGATGGAGGAAAAGCG

Downstream 100 bases:

>100_bases
AAAGGAGGTTTTACCAATGGTTTTTCAGCTTCGGCAATTTTTGCGCGCACTTGTGCTGGCTGCCTTTTCCGTCTTTATTT
TCAAGCTCCATTACACAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MFRSLNSYLIDFTGLVVISVLICLVSAGGSLASGLPFQIPASVLQLNTIFISILIEALPFVLIGVLIAGFIQIFVTEEHI
RSLFPKNRFSGVIVSCLLGACFPACECGIVPIVRRLVSKGVPIYAGVGFLLTGPLINPIVVLSTYMAFGNDLRMAVLRVA
VGFAAAVIIAFAISMMFRSSQLKTESRQTAAHCAHSGRRSPFSEKLFDMLKHAVDEFFDMGRFLIIGALVAALVQTYLPL
KSLFVFGGGMLDSALVMMGLAYFLSLCSEADAFIGASFTNLFPSSSILAFLVYGPMLDLKNTVMMLHAFKPKFVICLSVL
ITVVVFVCIKVVSLL

Sequences:

>Translated_335_residues
MFRSLNSYLIDFTGLVVISVLICLVSAGGSLASGLPFQIPASVLQLNTIFISILIEALPFVLIGVLIAGFIQIFVTEEHI
RSLFPKNRFSGVIVSCLLGACFPACECGIVPIVRRLVSKGVPIYAGVGFLLTGPLINPIVVLSTYMAFGNDLRMAVLRVA
VGFAAAVIIAFAISMMFRSSQLKTESRQTAAHCAHSGRRSPFSEKLFDMLKHAVDEFFDMGRFLIIGALVAALVQTYLPL
KSLFVFGGGMLDSALVMMGLAYFLSLCSEADAFIGASFTNLFPSSSILAFLVYGPMLDLKNTVMMLHAFKPKFVICLSVL
ITVVVFVCIKVVSLL
>Mature_335_residues
MFRSLNSYLIDFTGLVVISVLICLVSAGGSLASGLPFQIPASVLQLNTIFISILIEALPFVLIGVLIAGFIQIFVTEEHI
RSLFPKNRFSGVIVSCLLGACFPACECGIVPIVRRLVSKGVPIYAGVGFLLTGPLINPIVVLSTYMAFGNDLRMAVLRVA
VGFAAAVIIAFAISMMFRSSQLKTESRQTAAHCAHSGRRSPFSEKLFDMLKHAVDEFFDMGRFLIIGALVAALVQTYLPL
KSLFVFGGGMLDSALVMMGLAYFLSLCSEADAFIGASFTNLFPSSSILAFLVYGPMLDLKNTVMMLHAFKPKFVICLSVL
ITVVVFVCIKVVSLL

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 36164; Mature: 36164

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRSLNSYLIDFTGLVVISVLICLVSAGGSLASGLPFQIPASVLQLNTIFISILIEALPF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VLIGVLIAGFIQIFVTEEHIRSLFPKNRFSGVIVSCLLGACFPACECGIVPIVRRLVSKG
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
VPIYAGVGFLLTGPLINPIVVLSTYMAFGNDLRMAVLRVAVGFAAAVIIAFAISMMFRSS
CCEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLKTESRQTAAHCAHSGRRSPFSEKLFDMLKHAVDEFFDMGRFLIIGALVAALVQTYLPL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSLFVFGGGMLDSALVMMGLAYFLSLCSEADAFIGASFTNLFPSSSILAFLVYGPMLDLK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHH
NTVMMLHAFKPKFVICLSVLITVVVFVCIKVVSLL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MFRSLNSYLIDFTGLVVISVLICLVSAGGSLASGLPFQIPASVLQLNTIFISILIEALPF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VLIGVLIAGFIQIFVTEEHIRSLFPKNRFSGVIVSCLLGACFPACECGIVPIVRRLVSKG
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
VPIYAGVGFLLTGPLINPIVVLSTYMAFGNDLRMAVLRVAVGFAAAVIIAFAISMMFRSS
CCEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLKTESRQTAAHCAHSGRRSPFSEKLFDMLKHAVDEFFDMGRFLIIGALVAALVQTYLPL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSLFVFGGGMLDSALVMMGLAYFLSLCSEADAFIGASFTNLFPSSSILAFLVYGPMLDLK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHH
NTVMMLHAFKPKFVICLSVLITVVVFVCIKVVSLL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]