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The map label for this gene is yoaJ [H]

Identifier: 52786015

GI number: 52786015

Start: 2231098

End: 2231796

Strand: Direct

Name: yoaJ [H]

Synonym: BLi02271

Alternate gene names: 52786015

Gene position: 2231098-2231796 (Clockwise)

Preceding gene: 52786014

Following gene: 52786019

Centisome position: 52.84

GC content: 48.07

Gene sequence:

>699_bases
ATGAAAAAGAAAATCAGCATATTGATCACAGCAATGTTTTTGACAATCCTTTGTTTTTCGCCTCAAGCTTCCGCTGCGTA
CAACTCACTGCATACGGGCTATGCCACTTATACGGGGTCGGGCTACTCCGGCGGCGCATTGCTTTTGGACCCTATTCCGT
CCAATATGAAGATCACCGCTTTAAATCCGACAGATATGAATTACCGCGGTGTGAAAGCTGCTCTTGCCGGCGCCTATCTG
CGGGTTGAAGGGCCGAAAGGAAAAACGACCGTCTATGTTACCGATCTGTATCCTGAAGGAGCGCCGGGAGCCCTTGACCT
TTCACCGAACGCTTTTCGCGAGATCGGCGATATGAAAGACGGCAAAATCGACATTAAATGGCGTATAGTCAAAGCGCCGA
TTACCGGCAATTTCACTTACCGGATCAAAGAAGGCAGCAGCCAATGGTGGGCGGCGATCCAAGTCAGAAACCACAAATAT
CCCGTCATGAAAATGGAATATTACAAAGACGGAAAGTGGATCAACATGGAGAAAACGGATTACAACCATTTCGTCAGCAC
CAATCTCGGGACAAGTCCGCTTAAAGTCAGGATCACAGATATCCGAGGAAAAGTCGTCAAAGACACGATAAAAAAGCTTC
CGGAAAACGGGACGTCAAGCGCATATACCGTACCGGGAAAAGTACAGTTCCCTGACTGA

Upstream 100 bases:

>100_bases
TATTCCTTAAAAAGTCTCTGTAACTATTTCCTCTTTCGGCTGTTGTCGATTTGTCCTTATAATGATAATGGTTCTCAATT
TATAAAACAGGAGGATGTAT

Downstream 100 bases:

>100_bases
TCGATCCGGAAAGAATGAGACGGCGGCCAAAGGCGAAAAGATTCGCAGGCTTTGGCCGCCGCTTCATATTGACATCCGGC
ATTTAGACGCCAGCAACAAT

Product: YoaJ

Products: NA

Alternate protein names: EXLX1 [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKKKISILITAMFLTILCFSPQASAAYNSLHTGYATYTGSGYSGGALLLDPIPSNMKITALNPTDMNYRGVKAALAGAYL
RVEGPKGKTTVYVTDLYPEGAPGALDLSPNAFREIGDMKDGKIDIKWRIVKAPITGNFTYRIKEGSSQWWAAIQVRNHKY
PVMKMEYYKDGKWINMEKTDYNHFVSTNLGTSPLKVRITDIRGKVVKDTIKKLPENGTSSAYTVPGKVQFPD

Sequences:

>Translated_232_residues
MKKKISILITAMFLTILCFSPQASAAYNSLHTGYATYTGSGYSGGALLLDPIPSNMKITALNPTDMNYRGVKAALAGAYL
RVEGPKGKTTVYVTDLYPEGAPGALDLSPNAFREIGDMKDGKIDIKWRIVKAPITGNFTYRIKEGSSQWWAAIQVRNHKY
PVMKMEYYKDGKWINMEKTDYNHFVSTNLGTSPLKVRITDIRGKVVKDTIKKLPENGTSSAYTVPGKVQFPD
>Mature_232_residues
MKKKISILITAMFLTILCFSPQASAAYNSLHTGYATYTGSGYSGGALLLDPIPSNMKITALNPTDMNYRGVKAALAGAYL
RVEGPKGKTTVYVTDLYPEGAPGALDLSPNAFREIGDMKDGKIDIKWRIVKAPITGNFTYRIKEGSSQWWAAIQVRNHKY
PVMKMEYYKDGKWINMEKTDYNHFVSTNLGTSPLKVRITDIRGKVVKDTIKKLPENGTSSAYTVPGKVQFPD

Specific function: May promote colonization of plant roots. May cause loosening and extension of plant cell walls by disrupting non- covalent bonding between cellulose microfibrils and matrix glucans. Has very low expansin activity (in vitro). No enzymatic activity has been

COG id: COG4305

COG function: function code G; Endoglucanase C-terminal domain/subunit and related proteins

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 expansin-like EG45 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR007117 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 25688; Mature: 25688

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKISILITAMFLTILCFSPQASAAYNSLHTGYATYTGSGYSGGALLLDPIPSNMKITA
CCCCHHHHHHHHHHHHEECCCCCCHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCEEEE
LNPTDMNYRGVKAALAGAYLRVEGPKGKTTVYVTDLYPEGAPGALDLSPNAFREIGDMKD
ECCCCCCCCCHHHEECEEEEEEECCCCCEEEEEEEECCCCCCCEEECCCHHHHHHCCCCC
GKIDIKWRIVKAPITGNFTYRIKEGSSQWWAAIQVRNHKYPVMKMEYYKDGKWINMEKTD
CEEEEEEEEEECCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCEEEEECCC
YNHFVSTNLGTSPLKVRITDIRGKVVKDTIKKLPENGTSSAYTVPGKVQFPD
CCEEEECCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCEEECCCEEECCC
>Mature Secondary Structure
MKKKISILITAMFLTILCFSPQASAAYNSLHTGYATYTGSGYSGGALLLDPIPSNMKITA
CCCCHHHHHHHHHHHHEECCCCCCHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCEEEE
LNPTDMNYRGVKAALAGAYLRVEGPKGKTTVYVTDLYPEGAPGALDLSPNAFREIGDMKD
ECCCCCCCCCHHHEECEEEEEEECCCCCEEEEEEEECCCCCCCEEECCCHHHHHHCCCCC
GKIDIKWRIVKAPITGNFTYRIKEGSSQWWAAIQVRNHKYPVMKMEYYKDGKWINMEKTD
CEEEEEEEEEECCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCEEEEECCC
YNHFVSTNLGTSPLKVRITDIRGKVVKDTIKKLPENGTSSAYTVPGKVQFPD
CCEEEECCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCEEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]